RNA–Protein interactions for RNA: ENST00000571186.5

CIITA-205, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 1,041 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-205ENST00000571186 SNHG28P0DPA3 235 aa16.74■□□□□ 0.27
CIITA-205ENST00000571186 SDSP20132 328 aa16.74■□□□□ 0.27
CIITA-205ENST00000571186 CASTP20810 708 aaKnown RBP16.74■□□□□ 0.27
CIITA-205ENST00000571186 PLA2G5P39877 138 aa16.74■□□□□ 0.27
CIITA-205ENST00000571186 SPRED2Q7Z698 418 aa16.74■□□□□ 0.27
CIITA-205ENST00000571186 TMCO2Q7Z6W1 182 aaPredicted RBP16.74■□□□□ 0.27
CIITA-205ENST00000571186 ZNF589Q86UQ0 364 aaPredicted RBP16.74■□□□□ 0.27
CIITA-205ENST00000571186 EPHX3Q9H6B9 360 aa16.74■□□□□ 0.27
CIITA-205ENST00000571186 PCP11498 1178 aaKnown RBP16.73■□□□□ 0.27
CIITA-205ENST00000571186 SELPP16109 830 aa16.73■□□□□ 0.27
CIITA-205ENST00000571186 WDR5P61964 334 aaKnown RBP16.73■□□□□ 0.27
CIITA-205ENST00000571186 STXBP2Q15833 593 aa16.73■□□□□ 0.27
CIITA-205ENST00000571186 TTC22Q5TAA0 569 aa16.73■□□□□ 0.27
CIITA-205ENST00000571186 LRRC8DQ7L1W4 858 aa16.73■□□□□ 0.27
CIITA-205ENST00000571186 NSUN6Q8TEA1 469 aaKnown RBP16.73■□□□□ 0.27
CIITA-205ENST00000571186 RNF41Q9H4P4 317 aaPredicted RBP16.73■□□□□ 0.27
CIITA-205ENST00000571186 ABCB11O95342 1321 aa16.72■□□□□ 0.27
CIITA-205ENST00000571186 COL4A4P53420 1690 aaPredicted RBP16.72■□□□□ 0.27
CIITA-205ENST00000571186 LCHNA4D1U4 455 aa16.72■□□□□ 0.27
CIITA-205ENST00000571186 LPXNO60711 386 aa16.72■□□□□ 0.27
CIITA-205ENST00000571186 ARHGAP1Q07960 439 aa16.72■□□□□ 0.27
CIITA-205ENST00000571186 GPNMBQ14956 572 aa16.72■□□□□ 0.27
CIITA-205ENST00000571186 CDC37Q16543 378 aaPredicted RBP16.72■□□□□ 0.27
CIITA-205ENST00000571186 DGKDQ16760 1214 aa16.72■□□□□ 0.27
CIITA-205ENST00000571186 CNKSR3Q6P9H4 555 aa16.72■□□□□ 0.27
CIITA-205ENST00000571186 SESTD1Q86VW0 696 aa16.72■□□□□ 0.27
CIITA-205ENST00000571186 TBC1D10CQ8IV04 446 aa16.72■□□□□ 0.27
CIITA-205ENST00000571186 C7orf31Q8N865 590 aa16.72■□□□□ 0.27
CIITA-205ENST00000571186 SYTL5Q8TDW5 730 aaPredicted RBP16.72■□□□□ 0.27
CIITA-205ENST00000571186 ESR2Q92731 530 aa16.72■□□□□ 0.27
CIITA-205ENST00000571186 KAT2BQ92831 832 aa16.72■□□□□ 0.27
CIITA-205ENST00000571186 CTAGE1Q96RT6 745 aa16.72■□□□□ 0.27
CIITA-205ENST00000571186 RMDN3Q96TC7 470 aa16.72■□□□□ 0.27
CIITA-205ENST00000571186 ALG1Q9BT22 464 aa16.72■□□□□ 0.27
CIITA-205ENST00000571186 ZMYM6O95789 1325 aa16.71■□□□□ 0.27
CIITA-205ENST00000571186 CCDC171Q6TFL3 1326 aa16.71■□□□□ 0.27
CIITA-205ENST00000571186 PARNO95453 639 aaKnown RBP16.71■□□□□ 0.27
CIITA-205ENST00000571186 CKBP12277 381 aa16.71■□□□□ 0.27
CIITA-205ENST00000571186 DEFB103AP81534 67 aa16.71■□□□□ 0.27
CIITA-205ENST00000571186 ARHGEF16Q5VV41 709 aa16.71■□□□□ 0.27
CIITA-205ENST00000571186 DGKHQ86XP1 1220 aa16.71■□□□□ 0.27
CIITA-205ENST00000571186 MCF2L2Q86YR7 1114 aa16.71■□□□□ 0.27
CIITA-205ENST00000571186 ADGRF4Q8IZF3 695 aa16.71■□□□□ 0.27
CIITA-205ENST00000571186 PNMA1Q8ND90 353 aa16.71■□□□□ 0.27
CIITA-205ENST00000571186 GDPD5Q8WTR4 605 aa16.71■□□□□ 0.27
CIITA-205ENST00000571186 DHX38Q92620 1227 aaKnown RBP16.71■□□□□ 0.27
CIITA-205ENST00000571186 IWS1Q96ST2 819 aa16.71■□□□□ 0.27
CIITA-205ENST00000571186 LRFN3Q9BTN0 628 aa16.71■□□□□ 0.27
CIITA-205ENST00000571186 VAT1LQ9HCJ6 419 aa16.71■□□□□ 0.27
CIITA-205ENST00000571186 COL20A1Q9P218 1284 aa16.71■□□□□ 0.27
CIITA-205ENST00000571186 HDAC6Q9UBN7 1215 aa16.71■□□□□ 0.27
CIITA-205ENST00000571186 MTUS1Q9ULD2 1270 aa16.71■□□□□ 0.27
CIITA-205ENST00000571186 SIP14410 1827 aa16.7■□□□□ 0.26
CIITA-205ENST00000571186 BAZ2BQ9UIF8 2168 aaKnown RBP16.7■□□□□ 0.26
CIITA-205ENST00000571186 ZNF213O14771 459 aa16.7■□□□□ 0.26
CIITA-205ENST00000571186 DHX16O60231 1041 aaKnown RBP16.7■□□□□ 0.26
CIITA-205ENST00000571186 PSEN2P49810 448 aa16.7■□□□□ 0.26
CIITA-205ENST00000571186 MFAP1P55081 439 aaKnown RBP16.7■□□□□ 0.26
CIITA-205ENST00000571186 FAM117BQ6P1L5 589 aa16.7■□□□□ 0.26
CIITA-205ENST00000571186 CWC27Q6UX04 472 aaKnown RBP16.7■□□□□ 0.26
CIITA-205ENST00000571186 IQCA1Q86XH1 822 aa16.7■□□□□ 0.26
CIITA-205ENST00000571186 TICAM2Q86XR7 235 aa16.7■□□□□ 0.26
CIITA-205ENST00000571186 RAD9AQ99638 391 aa16.7■□□□□ 0.26
CIITA-205ENST00000571186 MAF1Q9H063 256 aa16.7■□□□□ 0.26
CIITA-205ENST00000571186 KAT14Q9H8E8 782 aa16.7■□□□□ 0.26
CIITA-205ENST00000571186 LMCD1Q9NZU5 365 aa16.7■□□□□ 0.26
CIITA-205ENST00000571186 GTF2IRD1Q9UHL9 959 aa16.7■□□□□ 0.26
CIITA-205ENST00000571186 DDX41Q9UJV9 622 aaKnown RBP16.7■□□□□ 0.26
CIITA-205ENST00000571186 MRPL11Q9Y3B7 192 aaKnown RBP16.7■□□□□ 0.26
CIITA-205ENST00000571186 NEDD4P46934 1319 aa16.7■□□□□ 0.26
CIITA-205ENST00000571186 ABHD14A-ACY1A0A1B0GW23 586 aa16.69■□□□□ 0.26
CIITA-205ENST00000571186 NBNO60934 754 aa16.69■□□□□ 0.26
CIITA-205ENST00000571186 CXCL10P02778 98 aa16.69■□□□□ 0.26
CIITA-205ENST00000571186 EIF2AK2P19525 551 aaKnown RBP16.69■□□□□ 0.26
CIITA-205ENST00000571186 IKBKEQ14164 716 aa16.69■□□□□ 0.26
CIITA-205ENST00000571186 CCDC178Q5BJE1 867 aa16.69■□□□□ 0.26
CIITA-205ENST00000571186 CENPQQ7L2Z9 268 aaPredicted RBP16.69■□□□□ 0.26
CIITA-205ENST00000571186 FBXO11Q86XK2 927 aa16.69■□□□□ 0.26
CIITA-205ENST00000571186 DHX37Q8IY37 1157 aaKnown RBP16.69■□□□□ 0.26
CIITA-205ENST00000571186 SUGCTQ9HAC7 445 aa16.69■□□□□ 0.26
CIITA-205ENST00000571186 DIAPH3Q9NSV4 1193 aa16.69■□□□□ 0.26
CIITA-205ENST00000571186 MRVI1Q9Y6F6 885 aa16.69■□□□□ 0.26
CIITA-205ENST00000571186 MICAL3Q7RTP6 2002 aa16.69■□□□□ 0.26
CIITA-205ENST00000571186 KAT6AQ92794 2004 aa16.69■□□□□ 0.26
CIITA-205ENST00000571186 KDM4AO75164 1064 aa16.68■□□□□ 0.26
CIITA-205ENST00000571186 EIF3JO75822 258 aaKnown RBP16.68■□□□□ 0.26
CIITA-205ENST00000571186 GJB5O95377 273 aa16.68■□□□□ 0.26
CIITA-205ENST00000571186 CFBP00751 764 aa16.68■□□□□ 0.26
CIITA-205ENST00000571186 NR3C2P08235 984 aa16.68■□□□□ 0.26
CIITA-205ENST00000571186 RBL2Q08999 1139 aa16.68■□□□□ 0.26
CIITA-205ENST00000571186 PTK7Q13308 1070 aa16.68■□□□□ 0.26
CIITA-205ENST00000571186 LAMC2Q13753 1193 aa16.68■□□□□ 0.26
CIITA-205ENST00000571186 MFSD10Q14728 455 aa16.68■□□□□ 0.26
CIITA-205ENST00000571186 KIAA0753Q2KHM9 967 aa16.68■□□□□ 0.26
CIITA-205ENST00000571186 TCTN1Q2MV58 587 aa16.68■□□□□ 0.26
CIITA-205ENST00000571186 QRICH1Q2TAL8 776 aa16.68■□□□□ 0.26
CIITA-205ENST00000571186 TMEM31Q5JXX7 168 aa16.68■□□□□ 0.26
CIITA-205ENST00000571186 TGS1Q96RS0 853 aaKnown RBP16.68■□□□□ 0.26
CIITA-205ENST00000571186 KATNAL1Q9BW62 490 aa16.68■□□□□ 0.26
CIITA-205ENST00000571186 IL25Q9H293 177 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms