RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 ECEL1O95672 775 aa4.01□□□□□ -1.77
SMG6-208ENST00000570874 CTSHP09668 335 aa4.01□□□□□ -1.77
SMG6-208ENST00000570874 IL4RP24394 825 aa4.01□□□□□ -1.77
SMG6-208ENST00000570874 MZF1P28698 734 aaPredicted RBP4.01□□□□□ -1.77
SMG6-208ENST00000570874 SERPINB3P29508 390 aa4.01□□□□□ -1.77
SMG6-208ENST00000570874 HPDP32754 393 aaPredicted RBP4.01□□□□□ -1.77
SMG6-208ENST00000570874 ETFBP38117 255 aa4.01□□□□□ -1.77
SMG6-208ENST00000570874 RAD52P43351 418 aa4.01□□□□□ -1.77
SMG6-208ENST00000570874 PAPOLAP51003 745 aaKnown RBP4.01□□□□□ -1.77
SMG6-208ENST00000570874 CTSWP56202 376 aa4.01□□□□□ -1.77
SMG6-208ENST00000570874 TIMM10P62072 90 aa4.01□□□□□ -1.77
SMG6-208ENST00000570874 PTH1RQ03431 593 aa4.01□□□□□ -1.77
SMG6-208ENST00000570874 APOBRQ0VD83 1088 aa4.01□□□□□ -1.77
SMG6-208ENST00000570874 MRPL28Q13084 256 aaKnown RBP4.01□□□□□ -1.77
SMG6-208ENST00000570874 MOGSQ13724 837 aa4.01□□□□□ -1.77
SMG6-208ENST00000570874 COL9A3Q14050 684 aaPredicted RBP4.01□□□□□ -1.77
SMG6-208ENST00000570874 SF3B3Q15393 1217 aaKnown RBP4.01□□□□□ -1.77
SMG6-208ENST00000570874 FILIP1LQ4L180 1135 aa4.01□□□□□ -1.77
SMG6-208ENST00000570874 TBC1D9BQ66K14 1250 aa4.01□□□□□ -1.77
SMG6-208ENST00000570874 C1orf228Q6PIY5 440 aa4.01□□□□□ -1.77
SMG6-208ENST00000570874 ABRAXAS1Q6UWZ7 409 aa4.01□□□□□ -1.77
SMG6-208ENST00000570874 CWC27Q6UX04 472 aaKnown RBP4.01□□□□□ -1.77
SMG6-208ENST00000570874 UNC5DQ6UXZ4 953 aa4.01□□□□□ -1.77
SMG6-208ENST00000570874 TAX1BP1Q86VP1 789 aa4.01□□□□□ -1.77
SMG6-208ENST00000570874 PASD1Q8IV76 773 aa4.01□□□□□ -1.77
SMG6-208ENST00000570874 FAM43AQ8N2R8 423 aa4.01□□□□□ -1.77
SMG6-208ENST00000570874 ZBTB38Q8NAP3 1195 aaPredicted RBP4.01□□□□□ -1.77
SMG6-208ENST00000570874 OR8H1Q8NGG4 311 aa4.01□□□□□ -1.77
SMG6-208ENST00000570874 TTLL11Q8NHH1 800 aa4.01□□□□□ -1.77
SMG6-208ENST00000570874 SPATA18Q8TC71 538 aa4.01□□□□□ -1.77
SMG6-208ENST00000570874 FBF1Q8TES7 1133 aa4.01□□□□□ -1.77
SMG6-208ENST00000570874 MAML1Q92585 1016 aa4.01□□□□□ -1.77
SMG6-208ENST00000570874 HVCN1Q96D96 273 aa4.01□□□□□ -1.77
SMG6-208ENST00000570874 MFSD3Q96ES6 412 aa4.01□□□□□ -1.77
SMG6-208ENST00000570874 CEP95Q96GE4 821 aa4.01□□□□□ -1.77
SMG6-208ENST00000570874 RMDN2Q96LZ7 410 aa4.01□□□□□ -1.77
SMG6-208ENST00000570874 FAM227BQ96M60 508 aa4.01□□□□□ -1.77
SMG6-208ENST00000570874 UROC1Q96N76 676 aa4.01□□□□□ -1.77
SMG6-208ENST00000570874 SLX1AQ9BQ83 275 aa4.01□□□□□ -1.77
SMG6-208ENST00000570874 CENPOQ9BU64 300 aa4.01□□□□□ -1.77
SMG6-208ENST00000570874 PLA2G12BQ9BX93 195 aa4.01□□□□□ -1.77
SMG6-208ENST00000570874 RTFDC1Q9BY42 306 aaPredicted RBP4.01□□□□□ -1.77
SMG6-208ENST00000570874 TRIM8Q9BZR9 551 aa4.01□□□□□ -1.77
SMG6-208ENST00000570874 DEF6Q9H4E7 631 aa4.01□□□□□ -1.77
SMG6-208ENST00000570874 PLEKHA5Q9HAU0 1116 aa4.01□□□□□ -1.77
SMG6-208ENST00000570874 EPB41L4AQ9HCS5 686 aaPredicted RBP4.01□□□□□ -1.77
SMG6-208ENST00000570874 SEC31BQ9NQW1 1179 aa4.01□□□□□ -1.77
SMG6-208ENST00000570874 AASDHPPTQ9NRN7 309 aa4.01□□□□□ -1.77
SMG6-208ENST00000570874 LRRC4BQ9NT99 713 aa4.01□□□□□ -1.77
SMG6-208ENST00000570874 ECHDC1Q9NTX5 307 aa4.01□□□□□ -1.77
SMG6-208ENST00000570874 ZNHIT6Q9NWK9 470 aaKnown RBP4.01□□□□□ -1.77
SMG6-208ENST00000570874 WBP1LQ9NX94 342 aa4.01□□□□□ -1.77
SMG6-208ENST00000570874 TRMT1Q9NXH9 659 aaKnown RBP4.01□□□□□ -1.77
SMG6-208ENST00000570874 SAGE1Q9NXZ1 904 aa4.01□□□□□ -1.77
SMG6-208ENST00000570874 SCHIP1Q9P0W5 487 aaPredicted RBP4.01□□□□□ -1.77
SMG6-208ENST00000570874 ZMAT5Q9UDW3 170 aaKnown RBP4.01□□□□□ -1.77
SMG6-208ENST00000570874 TRMT112Q9UI30 125 aaKnown RBP4.01□□□□□ -1.77
SMG6-208ENST00000570874 CCNL1Q9UK58 526 aaPredicted RBP4.01□□□□□ -1.77
SMG6-208ENST00000570874 NIP7Q9Y221 180 aaKnown RBP eCLIP4.01□□□□□ -1.77
SMG6-208ENST00000570874 LEMD3Q9Y2U8 911 aa4.01□□□□□ -1.77
SMG6-208ENST00000570874 MSRB2Q9Y3D2 182 aa4.01□□□□□ -1.77
SMG6-208ENST00000570874 KIF13BQ9NQT8 1826 aa4□□□□□ -1.77
SMG6-208ENST00000570874 TTC41PQ6P2S7 1318 aa4□□□□□ -1.77
SMG6-208ENST00000570874 CNTNAP4Q9C0A0 1308 aa4□□□□□ -1.77
SMG6-208ENST00000570874 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4□□□□□ -1.77
SMG6-208ENST00000570874 A0A0G2JLW4 131 aa4□□□□□ -1.77
SMG6-208ENST00000570874 A0A1B0GUL7 405 aa4□□□□□ -1.77
SMG6-208ENST00000570874 SOWAHBA6NEL2 793 aa4□□□□□ -1.77
SMG6-208ENST00000570874 WTIPA6NIX2 430 aaPredicted RBP4□□□□□ -1.77
SMG6-208ENST00000570874 SFI1A8K8P3 1242 aa4□□□□□ -1.77
SMG6-208ENST00000570874 VSTM5A8MXK1 200 aa4□□□□□ -1.77
SMG6-208ENST00000570874 SGTAO43765 313 aa4□□□□□ -1.77
SMG6-208ENST00000570874 AKR1B10O60218 316 aa4□□□□□ -1.77
SMG6-208ENST00000570874 PLOD3O60568 738 aa4□□□□□ -1.77
SMG6-208ENST00000570874 PDE8AO60658 829 aa4□□□□□ -1.77
SMG6-208ENST00000570874 DTNBO60941 627 aa4□□□□□ -1.77
SMG6-208ENST00000570874 KATNA1O75449 491 aa4□□□□□ -1.77
SMG6-208ENST00000570874 GLRX3O76003 335 aaKnown RBP4□□□□□ -1.77
SMG6-208ENST00000570874 ASMTLO95671 621 aa4□□□□□ -1.77
SMG6-208ENST00000570874 CSF1RP07333 972 aa4□□□□□ -1.77
SMG6-208ENST00000570874 SKILP12757 684 aa4□□□□□ -1.77
SMG6-208ENST00000570874 NPR3P17342 541 aa4□□□□□ -1.77
SMG6-208ENST00000570874 DESP17661 470 aa4□□□□□ -1.77
SMG6-208ENST00000570874 ENPP1P22413 925 aa4□□□□□ -1.77
SMG6-208ENST00000570874 ITGA6P23229 1130 aa4□□□□□ -1.77
SMG6-208ENST00000570874 RPS6KB1P23443 525 aa4□□□□□ -1.77
SMG6-208ENST00000570874 CCNCP24863 283 aa4□□□□□ -1.77
SMG6-208ENST00000570874 HSPA4P34932 840 aa4□□□□□ -1.77
SMG6-208ENST00000570874 MAGEA8P43361 318 aa4□□□□□ -1.77
SMG6-208ENST00000570874 NASPP49321 788 aaPredicted RBP4□□□□□ -1.77
SMG6-208ENST00000570874 ATP1A2P50993 1020 aa4□□□□□ -1.77
SMG6-208ENST00000570874 SESN3P58005 492 aa4□□□□□ -1.77
SMG6-208ENST00000570874 ZNF280AP59817 542 aaPredicted RBP4□□□□□ -1.77
SMG6-208ENST00000570874 MRPS35P82673 323 aaKnown RBP4□□□□□ -1.77
SMG6-208ENST00000570874 NR1H3Q13133 447 aa4□□□□□ -1.77
SMG6-208ENST00000570874 TRIM28Q13263 835 aaKnown RBP4□□□□□ -1.77
SMG6-208ENST00000570874 NMIQ13287 307 aaPredicted RBP4□□□□□ -1.77
SMG6-208ENST00000570874 SCARF1Q14162 830 aa4□□□□□ -1.77
SMG6-208ENST00000570874 PLCB4Q15147 1175 aa4□□□□□ -1.77
SMG6-208ENST00000570874 SAFBQ15424 915 aaKnown RBP eCLIP4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms