RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 RASSF7Q02833 373 aa17.01■□□□□ 0.31
SMG6-207ENST00000570756 BIRC3Q13489 604 aa17.01■□□□□ 0.31
SMG6-207ENST00000570756 CDC37Q16543 378 aaPredicted RBP17.01■□□□□ 0.31
SMG6-207ENST00000570756 RRAGAQ7L523 313 aa17.01■□□□□ 0.31
SMG6-207ENST00000570756 ZCRB1Q8TBF4 217 aaKnown RBP17.01■□□□□ 0.31
SMG6-207ENST00000570756 MTMR8Q96EF0 704 aa17.01■□□□□ 0.31
SMG6-207ENST00000570756 KRT12Q99456 494 aa17.01■□□□□ 0.31
SMG6-207ENST00000570756 NDST4Q9H3R1 872 aa17.01■□□□□ 0.31
SMG6-207ENST00000570756 MMRN2Q9H8L6 949 aa17.01■□□□□ 0.31
SMG6-207ENST00000570756 DLEC1Q9Y238 1755 aa17.01■□□□□ 0.31
SMG6-207ENST00000570756 ABCB11O95342 1321 aa17.01■□□□□ 0.31
SMG6-207ENST00000570756 LRRC53A6NM62 1247 aa17.01■□□□□ 0.31
SMG6-207ENST00000570756 LAD1O00515 517 aa17.01■□□□□ 0.31
SMG6-207ENST00000570756 FGFR1OPO95684 399 aaKnown RBP17.01■□□□□ 0.31
SMG6-207ENST00000570756 CNNM4Q6P4Q7 775 aa17.01■□□□□ 0.31
SMG6-207ENST00000570756 RUFY4Q6ZNE9 571 aa17.01■□□□□ 0.31
SMG6-207ENST00000570756 CEP57Q86XR8 500 aa17.01■□□□□ 0.31
SMG6-207ENST00000570756 FUKQ8N0W3 1084 aa17.01■□□□□ 0.31
SMG6-207ENST00000570756 SDR42E1Q8WUS8 393 aa17.01■□□□□ 0.31
SMG6-207ENST00000570756 SALL4Q9UJQ4 1053 aa17.01■□□□□ 0.31
SMG6-207ENST00000570756 ZSCAN5CA6NGD5 496 aaPredicted RBP17■□□□□ 0.31
SMG6-207ENST00000570756 BUB1O43683 1085 aa17■□□□□ 0.31
SMG6-207ENST00000570756 CYP7A1P22680 504 aa17■□□□□ 0.31
SMG6-207ENST00000570756 COBLL1Q53SF7 1204 aa17■□□□□ 0.31
SMG6-207ENST00000570756 ANKRD13CQ8N6S4 541 aa17■□□□□ 0.31
SMG6-207ENST00000570756 LRRC45Q96CN5 670 aa17■□□□□ 0.31
SMG6-207ENST00000570756 EDEM3Q9BZQ6 932 aa17■□□□□ 0.31
SMG6-207ENST00000570756 DDX20Q9UHI6 824 aaKnown RBP17■□□□□ 0.31
SMG6-207ENST00000570756 MAGEB6P1A0A0J9YX57 407 aa17■□□□□ 0.31
SMG6-207ENST00000570756 CCDC194A0A1B0GVG4 234 aa17■□□□□ 0.31
SMG6-207ENST00000570756 TRAPPC3O43617 180 aa17■□□□□ 0.31
SMG6-207ENST00000570756 ASIC1P78348 528 aa17■□□□□ 0.31
SMG6-207ENST00000570756 MAN2A1Q16706 1144 aa17■□□□□ 0.31
SMG6-207ENST00000570756 ANKRD20A8PQ5CZ79 823 aa17■□□□□ 0.31
SMG6-207ENST00000570756 ARHGAP27Q6ZUM4 889 aa17■□□□□ 0.31
SMG6-207ENST00000570756 TRIM9Q9C026 710 aa17■□□□□ 0.31
SMG6-207ENST00000570756 TAF1DQ9H5J8 278 aaPredicted RBP17■□□□□ 0.31
SMG6-207ENST00000570756 SH3GLB2Q9NR46 395 aa17■□□□□ 0.31
SMG6-207ENST00000570756 TRMT112Q9UI30 125 aaKnown RBP17■□□□□ 0.31
SMG6-207ENST00000570756 LRP5O75197 1615 aa17■□□□□ 0.31
SMG6-207ENST00000570756 PP2D1A8MPX8 630 aa16.99■□□□□ 0.31
SMG6-207ENST00000570756 AMPD3Q01432 767 aa16.99■□□□□ 0.31
SMG6-207ENST00000570756 STK4Q13043 487 aa16.99■□□□□ 0.31
SMG6-207ENST00000570756 CUL1Q13616 776 aa16.99■□□□□ 0.31
SMG6-207ENST00000570756 CRYMQ14894 314 aa16.99■□□□□ 0.31
SMG6-207ENST00000570756 CACNA2D4Q7Z3S7 1137 aa16.99■□□□□ 0.31
SMG6-207ENST00000570756 CACNA2D3Q8IZS8 1091 aa16.99■□□□□ 0.31
SMG6-207ENST00000570756 PLIN2Q99541 437 aa16.99■□□□□ 0.31
SMG6-207ENST00000570756 TCP11L1Q9NUJ3 509 aa16.99■□□□□ 0.31
SMG6-207ENST00000570756 PCDHA4Q9UN74 947 aa16.99■□□□□ 0.31
SMG6-207ENST00000570756 A0A1B0GUA9 196 aa16.99■□□□□ 0.31
SMG6-207ENST00000570756 RBAK-RBAKDNI3L0D1 243 aa16.99■□□□□ 0.31
SMG6-207ENST00000570756 EPHB6O15197 1021 aa16.99■□□□□ 0.31
SMG6-207ENST00000570756 SCP2P22307 547 aa16.99■□□□□ 0.31
SMG6-207ENST00000570756 SLC1A4P43007 532 aa16.99■□□□□ 0.31
SMG6-207ENST00000570756 GFPT1Q06210 699 aaPredicted RBP16.99■□□□□ 0.31
SMG6-207ENST00000570756 ASTE1Q2TB18 679 aaPredicted RBP16.99■□□□□ 0.31
SMG6-207ENST00000570756 AK8Q96MA6 479 aa16.99■□□□□ 0.31
SMG6-207ENST00000570756 C7orf25Q9BPX7 421 aa16.99■□□□□ 0.31
SMG6-207ENST00000570756 NUCKS1Q9H1E3 243 aaKnown RBP16.99■□□□□ 0.31
SMG6-207ENST00000570756 ISCUQ9H1K1 167 aa16.99■□□□□ 0.31
SMG6-207ENST00000570756 ERCC3P19447 782 aa16.98■□□□□ 0.31
SMG6-207ENST00000570756 PRPHP41219 470 aa16.98■□□□□ 0.31
SMG6-207ENST00000570756 HLTFQ14527 1009 aaKnown RBP eCLIP16.98■□□□□ 0.31
SMG6-207ENST00000570756 NBPF9Q3BBW0 867 aa16.98■□□□□ 0.31
SMG6-207ENST00000570756 PDXDC1Q6P996 788 aa16.98■□□□□ 0.31
SMG6-207ENST00000570756 OSBPL7Q9BZF2 842 aa16.98■□□□□ 0.31
SMG6-207ENST00000570756 SLC12A6Q9UHW9 1150 aa16.98■□□□□ 0.31
SMG6-207ENST00000570756 RREB1Q92766 1687 aa16.98■□□□□ 0.31
SMG6-207ENST00000570756 PALMO75781 387 aa16.98■□□□□ 0.31
SMG6-207ENST00000570756 KIF5BP33176 963 aa16.98■□□□□ 0.31
SMG6-207ENST00000570756 NKX1-1Q15270 411 aaPredicted RBP16.98■□□□□ 0.31
SMG6-207ENST00000570756 SLC9C1Q4G0N8 1177 aa16.98■□□□□ 0.31
SMG6-207ENST00000570756 LACTB2Q53H82 288 aaPredicted RBP16.98■□□□□ 0.31
SMG6-207ENST00000570756 TDRD12Q587J7 1177 aaKnown RBP16.98■□□□□ 0.31
SMG6-207ENST00000570756 TEX11Q8IYF3 940 aa16.98■□□□□ 0.31
SMG6-207ENST00000570756 SCLT1Q96NL6 688 aa16.98■□□□□ 0.31
SMG6-207ENST00000570756 ATP6V0A4Q9HBG4 840 aa16.98■□□□□ 0.31
SMG6-207ENST00000570756 AFF2P51816 1311 aa16.97■□□□□ 0.31
SMG6-207ENST00000570756 BAZ2BQ9UIF8 2168 aaKnown RBP16.97■□□□□ 0.31
SMG6-207ENST00000570756 SLIT2O94813 1529 aa16.97■□□□□ 0.31
SMG6-207ENST00000570756 C5orf60A6NFR6 353 aa16.97■□□□□ 0.31
SMG6-207ENST00000570756 FGRP09769 529 aa16.97■□□□□ 0.31
SMG6-207ENST00000570756 PLCG1P19174 1290 aa16.97■□□□□ 0.31
SMG6-207ENST00000570756 HSD17B3P37058 310 aa16.97■□□□□ 0.31
SMG6-207ENST00000570756 XRCC4Q13426 336 aa16.97■□□□□ 0.31
SMG6-207ENST00000570756 ODF2Q5BJF6 829 aa16.97■□□□□ 0.31
SMG6-207ENST00000570756 GKAP1Q5VSY0 366 aaPredicted RBP16.97■□□□□ 0.31
SMG6-207ENST00000570756 CENPPQ6IPU0 288 aa16.97■□□□□ 0.31
SMG6-207ENST00000570756 CABP7Q86V35 215 aa16.97■□□□□ 0.31
SMG6-207ENST00000570756 BAP1Q92560 729 aa16.97■□□□□ 0.31
SMG6-207ENST00000570756 SEC16BQ96JE7 1060 aa16.97■□□□□ 0.31
SMG6-207ENST00000570756 INPP4AQ96PE3 977 aaPredicted RBP16.97■□□□□ 0.31
SMG6-207ENST00000570756 USP21Q9UK80 565 aa16.97■□□□□ 0.31
SMG6-207ENST00000570756 NRAPQ86VF7 1730 aa16.97■□□□□ 0.31
SMG6-207ENST00000570756 RAD51CO43502 376 aa16.97■□□□□ 0.31
SMG6-207ENST00000570756 STARD3NLO95772 234 aa16.97■□□□□ 0.31
SMG6-207ENST00000570756 PAEPP09466 180 aa16.97■□□□□ 0.31
SMG6-207ENST00000570756 MYBP10242 640 aa16.97■□□□□ 0.31
SMG6-207ENST00000570756 CTNNA1P35221 906 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms