RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 PTPREP23469 700 aa17.47■□□□□ 0.39
HERPUD1-219ENST00000570273 ADORA2AP29274 412 aa17.47■□□□□ 0.39
HERPUD1-219ENST00000570273 ALDH5A1P51649 535 aaPredicted RBP17.47■□□□□ 0.39
HERPUD1-219ENST00000570273 Q4G0T1 1027 aa17.47■□□□□ 0.39
HERPUD1-219ENST00000570273 XRRA1Q6P2D8 792 aa17.47■□□□□ 0.39
HERPUD1-219ENST00000570273 C4orf32Q8N8J7 132 aa17.47■□□□□ 0.39
HERPUD1-219ENST00000570273 ZFP91Q96JP5 570 aaPredicted RBP17.47■□□□□ 0.39
HERPUD1-219ENST00000570273 WBP1LQ9NX94 342 aa17.47■□□□□ 0.39
HERPUD1-219ENST00000570273 FBXO2Q9UK22 296 aaPredicted RBP17.47■□□□□ 0.39
HERPUD1-219ENST00000570273 PCDHA7Q9UN72 937 aa17.47■□□□□ 0.39
HERPUD1-219ENST00000570273 DNAJC25-GNG10A0A024R161 153 aa17.47■□□□□ 0.39
HERPUD1-219ENST00000570273 SLC15A5A6NIM6 579 aa17.47■□□□□ 0.39
HERPUD1-219ENST00000570273 MARCH6O60337 910 aa17.47■□□□□ 0.39
HERPUD1-219ENST00000570273 TBC1D8O95759 1140 aa17.47■□□□□ 0.39
HERPUD1-219ENST00000570273 UBE2HP62256 183 aa17.47■□□□□ 0.39
HERPUD1-219ENST00000570273 SETQ01105 290 aaPredicted RBP17.47■□□□□ 0.39
HERPUD1-219ENST00000570273 GRB14Q14449 540 aa17.47■□□□□ 0.39
HERPUD1-219ENST00000570273 CEP55Q53EZ4 464 aa17.47■□□□□ 0.39
HERPUD1-219ENST00000570273 PLA2G4DQ86XP0 818 aa17.47■□□□□ 0.39
HERPUD1-219ENST00000570273 FERMT2Q96AC1 680 aa17.47■□□□□ 0.39
HERPUD1-219ENST00000570273 MPHOSPH6Q99547 160 aaKnown RBP17.47■□□□□ 0.39
HERPUD1-219ENST00000570273 RNF186Q9NXI6 227 aa17.47■□□□□ 0.39
HERPUD1-219ENST00000570273 SRPRBQ9Y5M8 271 aaKnown RBP17.47■□□□□ 0.39
HERPUD1-219ENST00000570273 PLXNB2O15031 1838 aa17.47■□□□□ 0.39
HERPUD1-219ENST00000570273 LCTP09848 1927 aa17.46■□□□□ 0.39
HERPUD1-219ENST00000570273 ASTN1O14525 1302 aa17.46■□□□□ 0.39
HERPUD1-219ENST00000570273 B4DLN1 442 aa17.46■□□□□ 0.39
HERPUD1-219ENST00000570273 CUTAO60888 179 aa17.46■□□□□ 0.39
HERPUD1-219ENST00000570273 TRPA1O75762 1119 aa17.46■□□□□ 0.39
HERPUD1-219ENST00000570273 MAP2K1Q02750 393 aaPredicted RBP17.46■□□□□ 0.39
HERPUD1-219ENST00000570273 ARL6IP4Q66PJ3 421 aaKnown RBP17.46■□□□□ 0.39
HERPUD1-219ENST00000570273 CYP2W1Q8TAV3 490 aa17.46■□□□□ 0.39
HERPUD1-219ENST00000570273 LENG9Q96B70 501 aa17.46■□□□□ 0.39
HERPUD1-219ENST00000570273 CLIC6Q96NY7 704 aa17.46■□□□□ 0.39
HERPUD1-219ENST00000570273 IWS1Q96ST2 819 aa17.46■□□□□ 0.39
HERPUD1-219ENST00000570273 MXRA8Q9BRK3 442 aa17.46■□□□□ 0.39
HERPUD1-219ENST00000570273 UBIAD1Q9Y5Z9 338 aa17.46■□□□□ 0.39
HERPUD1-219ENST00000570273 IGLV3-22A0A075B6J6 115 aa17.45■□□□□ 0.38
HERPUD1-219ENST00000570273 VWA3AA6NCI4 1184 aa17.45■□□□□ 0.38
HERPUD1-219ENST00000570273 PRPHP41219 470 aa17.45■□□□□ 0.38
HERPUD1-219ENST00000570273 MRPS9P82933 396 aaKnown RBP17.45■□□□□ 0.38
HERPUD1-219ENST00000570273 PDE4DQ08499 809 aa17.45■□□□□ 0.38
HERPUD1-219ENST00000570273 VSIG10LQ86VR7 867 aa17.45■□□□□ 0.38
HERPUD1-219ENST00000570273 FGD4Q96M96 766 aa17.45■□□□□ 0.38
HERPUD1-219ENST00000570273 CFHR5Q9BXR6 569 aa17.45■□□□□ 0.38
HERPUD1-219ENST00000570273 KCNMB3Q9NPA1 279 aa17.45■□□□□ 0.38
HERPUD1-219ENST00000570273 DDX49Q9Y6V7 483 aaKnown RBP17.45■□□□□ 0.38
HERPUD1-219ENST00000570273 ZNF236Q9UL36 1845 aa17.44■□□□□ 0.38
HERPUD1-219ENST00000570273 TNPO2O14787 897 aaKnown RBP17.44■□□□□ 0.38
HERPUD1-219ENST00000570273 COBLO75128 1261 aa17.44■□□□□ 0.38
HERPUD1-219ENST00000570273 ITGB5P18084 799 aa17.44■□□□□ 0.38
HERPUD1-219ENST00000570273 FCGRTP55899 365 aa17.44■□□□□ 0.38
HERPUD1-219ENST00000570273 GRIN1Q05586 938 aa17.44■□□□□ 0.38
HERPUD1-219ENST00000570273 TMEM266Q2M3C6 531 aa17.44■□□□□ 0.38
HERPUD1-219ENST00000570273 ZNF792Q3KQV3 632 aa17.44■□□□□ 0.38
HERPUD1-219ENST00000570273 AXDND1Q5T1B0 1012 aaPredicted RBP17.44■□□□□ 0.38
HERPUD1-219ENST00000570273 DTHD1Q6ZMT9 781 aa17.44■□□□□ 0.38
HERPUD1-219ENST00000570273 NIPA1Q7RTP0 329 aa17.44■□□□□ 0.38
HERPUD1-219ENST00000570273 DPP9Q86TI2 863 aa17.44■□□□□ 0.38
HERPUD1-219ENST00000570273 ETNPPLQ8TBG4 499 aa17.44■□□□□ 0.38
HERPUD1-219ENST00000570273 MTMR9Q96QG7 549 aa17.44■□□□□ 0.38
HERPUD1-219ENST00000570273 UIMC1Q96RL1 719 aa17.44■□□□□ 0.38
HERPUD1-219ENST00000570273 JADE2Q9NQC1 790 aa17.44■□□□□ 0.38
HERPUD1-219ENST00000570273 A0A1W2PQ27 194 aa17.43■□□□□ 0.38
HERPUD1-219ENST00000570273 A0A1W2PQ64 194 aa17.43■□□□□ 0.38
HERPUD1-219ENST00000570273 A0A1W2PQD8 194 aa17.43■□□□□ 0.38
HERPUD1-219ENST00000570273 MEIS1O00470 390 aa17.43■□□□□ 0.38
HERPUD1-219ENST00000570273 TBX3O15119 743 aa17.43■□□□□ 0.38
HERPUD1-219ENST00000570273 MSH4O15457 936 aa17.43■□□□□ 0.38
HERPUD1-219ENST00000570273 STAM2O75886 525 aa17.43■□□□□ 0.38
HERPUD1-219ENST00000570273 EDNRBP24530 442 aa17.43■□□□□ 0.38
HERPUD1-219ENST00000570273 TXKP42681 527 aa17.43■□□□□ 0.38
HERPUD1-219ENST00000570273 STXBP2Q15833 593 aa17.43■□□□□ 0.38
HERPUD1-219ENST00000570273 ADALQ6DHV7 355 aa17.43■□□□□ 0.38
HERPUD1-219ENST00000570273 NLRX1Q86UT6 975 aa17.43■□□□□ 0.38
HERPUD1-219ENST00000570273 SLFN12Q8IYM2 578 aa17.43■□□□□ 0.38
HERPUD1-219ENST00000570273 FSIP1Q8NA03 581 aa17.43■□□□□ 0.38
HERPUD1-219ENST00000570273 MRPS27Q92552 414 aaKnown RBP17.43■□□□□ 0.38
HERPUD1-219ENST00000570273 HAS1Q92839 578 aa17.43■□□□□ 0.38
HERPUD1-219ENST00000570273 CSRNP2Q9H175 543 aa17.43■□□□□ 0.38
HERPUD1-219ENST00000570273 SLC5A4Q9NY91 659 aa17.43■□□□□ 0.38
HERPUD1-219ENST00000570273 LOC102724159A0A0B4J2E5 919 aa17.42■□□□□ 0.38
HERPUD1-219ENST00000570273 ASB14A6NK59 587 aa17.42■□□□□ 0.38
HERPUD1-219ENST00000570273 HSPA1AP0DMV8 641 aaKnown RBP17.42■□□□□ 0.38
HERPUD1-219ENST00000570273 HSPA1BP0DMV9 641 aaKnown RBP17.42■□□□□ 0.38
HERPUD1-219ENST00000570273 ARP10275 920 aa17.42■□□□□ 0.38
HERPUD1-219ENST00000570273 LACTBP83111 547 aaPredicted RBP17.42■□□□□ 0.38
HERPUD1-219ENST00000570273 MAP2K5Q13163 448 aa17.42■□□□□ 0.38
HERPUD1-219ENST00000570273 MTMR1Q13613 665 aa17.42■□□□□ 0.38
HERPUD1-219ENST00000570273 PWP2Q15269 919 aaKnown RBP17.42■□□□□ 0.38
HERPUD1-219ENST00000570273 IL17AQ16552 155 aa17.42■□□□□ 0.38
HERPUD1-219ENST00000570273 GNPTABQ3T906 1256 aa17.42■□□□□ 0.38
HERPUD1-219ENST00000570273 MORN1Q5T089 497 aa17.42■□□□□ 0.38
HERPUD1-219ENST00000570273 SOCS4Q8WXH5 440 aa17.42■□□□□ 0.38
HERPUD1-219ENST00000570273 GJA10Q969M2 543 aa17.42■□□□□ 0.38
HERPUD1-219ENST00000570273 GPRASP2Q96D09 838 aa17.42■□□□□ 0.38
HERPUD1-219ENST00000570273 FAM20AQ96MK3 541 aa17.42■□□□□ 0.38
HERPUD1-219ENST00000570273 INPP4AQ96PE3 977 aaPredicted RBP17.42■□□□□ 0.38
HERPUD1-219ENST00000570273 WDR11Q9BZH6 1224 aa17.42■□□□□ 0.38
HERPUD1-219ENST00000570273 MBD3O95983 291 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms