RNA–Protein interactions for RNA: ENST00000569298.1

KARS-211, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 589 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-211ENST00000569298 HAPLN3Q96S86 360 aa7.13□□□□□ -1.27
KARS-211ENST00000569298 SETDB2Q96T68 719 aa7.13□□□□□ -1.27
KARS-211ENST00000569298 CCT7Q99832 543 aa7.13□□□□□ -1.27
KARS-211ENST00000569298 NAA15Q9BXJ9 866 aaKnown RBP7.13□□□□□ -1.27
KARS-211ENST00000569298 CARD11Q9BXL7 1154 aa7.13□□□□□ -1.27
KARS-211ENST00000569298 OSBPL1AQ9BXW6 950 aa7.13□□□□□ -1.27
KARS-211ENST00000569298 SLC7A5P2Q9GIP4 190 aa7.13□□□□□ -1.27
KARS-211ENST00000569298 TNMDQ9H2S6 317 aa7.13□□□□□ -1.27
KARS-211ENST00000569298 CLSTN2Q9H4D0 955 aa7.13□□□□□ -1.27
KARS-211ENST00000569298 ZNF304Q9HCX3 659 aa7.13□□□□□ -1.27
KARS-211ENST00000569298 MKS1Q9NXB0 559 aa7.13□□□□□ -1.27
KARS-211ENST00000569298 LARSQ9P2J5 1176 aaKnown RBP7.13□□□□□ -1.27
KARS-211ENST00000569298 SUCLA2Q9P2R7 463 aaPredicted RBP7.13□□□□□ -1.27
KARS-211ENST00000569298 CDV3Q9UKY7 258 aaKnown RBP7.13□□□□□ -1.27
KARS-211ENST00000569298 CFAP45Q9UL16 551 aa7.13□□□□□ -1.27
KARS-211ENST00000569298 MAFFQ9ULX9 164 aa7.13□□□□□ -1.27
KARS-211ENST00000569298 HPCAL4Q9UM19 191 aa7.13□□□□□ -1.27
KARS-211ENST00000569298 NOSIPQ9Y314 301 aaKnown RBP7.13□□□□□ -1.27
KARS-211ENST00000569298 CUL7Q14999 1698 aa7.12□□□□□ -1.27
KARS-211ENST00000569298 FAM135BQ49AJ0 1406 aa7.12□□□□□ -1.27
KARS-211ENST00000569298 CARNS1A5YM72 827 aa7.12□□□□□ -1.27
KARS-211ENST00000569298 DPPA5A6NC42 116 aa7.12□□□□□ -1.27
KARS-211ENST00000569298 C5orf60A6NFR6 353 aa7.12□□□□□ -1.27
KARS-211ENST00000569298 N4BP3O15049 544 aa7.12□□□□□ -1.27
KARS-211ENST00000569298 GIGYF1O75420 1035 aaPredicted RBP7.12□□□□□ -1.27
KARS-211ENST00000569298 MTA2O94776 668 aa7.12□□□□□ -1.27
KARS-211ENST00000569298 PTPN2P17706 415 aa7.12□□□□□ -1.27
KARS-211ENST00000569298 ENDOUP21128 410 aaKnown RBP7.12□□□□□ -1.27
KARS-211ENST00000569298 CALB2P22676 271 aa7.12□□□□□ -1.27
KARS-211ENST00000569298 CLK1P49759 484 aaKnown RBP7.12□□□□□ -1.27
KARS-211ENST00000569298 CLCN2P51788 898 aa7.12□□□□□ -1.27
KARS-211ENST00000569298 LSAMPQ13449 338 aa7.12□□□□□ -1.27
KARS-211ENST00000569298 ALDH1L2Q3SY69 923 aa7.12□□□□□ -1.27
KARS-211ENST00000569298 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.12□□□□□ -1.27
KARS-211ENST00000569298 ANO6Q4KMQ2 910 aa7.12□□□□□ -1.27
KARS-211ENST00000569298 PCNX4Q63HM2 1172 aa7.12□□□□□ -1.27
KARS-211ENST00000569298 TMEM53Q6P2H8 277 aa7.12□□□□□ -1.27
KARS-211ENST00000569298 NEK10Q6ZWH5 1172 aa7.12□□□□□ -1.27
KARS-211ENST00000569298 CACNA2D4Q7Z3S7 1137 aa7.12□□□□□ -1.27
KARS-211ENST00000569298 KRT77Q7Z794 578 aa7.12□□□□□ -1.27
KARS-211ENST00000569298 PPFIBP1Q86W92 1011 aa7.12□□□□□ -1.27
KARS-211ENST00000569298 PLEKHM2Q8IWE5 1019 aa7.12□□□□□ -1.27
KARS-211ENST00000569298 CCDC116Q8IYX3 515 aa7.12□□□□□ -1.27
KARS-211ENST00000569298 THEMISQ8N1K5 641 aaPredicted RBP7.12□□□□□ -1.27
KARS-211ENST00000569298 DEPDC4Q8N2C3 294 aa7.12□□□□□ -1.27
KARS-211ENST00000569298 UHMK1Q8TAS1 419 aaKnown RBP7.12□□□□□ -1.27
KARS-211ENST00000569298 SH3TC2Q8TF17 1288 aa7.12□□□□□ -1.27
KARS-211ENST00000569298 GIPC2Q8TF65 315 aa7.12□□□□□ -1.27
KARS-211ENST00000569298 MAML1Q92585 1016 aa7.12□□□□□ -1.27
KARS-211ENST00000569298 APPBP2Q92624 585 aa7.12□□□□□ -1.27
KARS-211ENST00000569298 PTPRN2Q92932 1015 aa7.12□□□□□ -1.27
KARS-211ENST00000569298 RNPC3Q96LT9 517 aaKnown RBP7.12□□□□□ -1.27
KARS-211ENST00000569298 FGD4Q96M96 766 aa7.12□□□□□ -1.27
KARS-211ENST00000569298 PURBQ96QR8 312 aaKnown RBP7.12□□□□□ -1.27
KARS-211ENST00000569298 C2orf49Q9BVC5 232 aaPredicted RBP7.12□□□□□ -1.27
KARS-211ENST00000569298 INO80BQ9C086 356 aaPredicted RBP7.12□□□□□ -1.27
KARS-211ENST00000569298 AS3MTQ9HBK9 375 aa7.12□□□□□ -1.27
KARS-211ENST00000569298 FKBP14Q9NWM8 211 aa7.12□□□□□ -1.27
KARS-211ENST00000569298 PDP2Q9P2J9 529 aa7.12□□□□□ -1.27
KARS-211ENST00000569298 WWC3Q9ULE0 1092 aa7.12□□□□□ -1.27
KARS-211ENST00000569298 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.12□□□□□ -1.27
KARS-211ENST00000569298 EMILIN1Q9Y6C2 1016 aa7.12□□□□□ -1.27
KARS-211ENST00000569298 CFAP43Q8NDM7 1665 aa7.12□□□□□ -1.27
KARS-211ENST00000569298 KIF14Q15058 1648 aa7.12□□□□□ -1.27
KARS-211ENST00000569298 EHBP1L1Q8N3D4 1523 aa7.11□□□□□ -1.27
KARS-211ENST00000569298 ARHGEF12Q9NZN5 1544 aa7.11□□□□□ -1.27
KARS-211ENST00000569298 RGS12O14924 1447 aa7.11□□□□□ -1.27
KARS-211ENST00000569298 TRIM43BA6NCK2 446 aa7.11□□□□□ -1.27
KARS-211ENST00000569298 PPIP5K2O43314 1243 aa7.11□□□□□ -1.27
KARS-211ENST00000569298 SGTAO43765 313 aa7.11□□□□□ -1.27
KARS-211ENST00000569298 WDHD1O75717 1129 aaPredicted RBP7.11□□□□□ -1.27
KARS-211ENST00000569298 RXRBP28702 533 aa7.11□□□□□ -1.27
KARS-211ENST00000569298 MTTPP55157 894 aa7.11□□□□□ -1.27
KARS-211ENST00000569298 BPIFB4P59827 614 aa7.11□□□□□ -1.27
KARS-211ENST00000569298 BASP1P80723 227 aaKnown RBP7.11□□□□□ -1.27
KARS-211ENST00000569298 WASHC5Q12768 1159 aa7.11□□□□□ -1.27
KARS-211ENST00000569298 ACCSLQ4AC99 568 aa7.11□□□□□ -1.27
KARS-211ENST00000569298 ANKRD20A8PQ5CZ79 823 aa7.11□□□□□ -1.27
KARS-211ENST00000569298 AGAP9Q5VTM2 703 aa7.11□□□□□ -1.27
KARS-211ENST00000569298 NAA35Q5VZE5 725 aa7.11□□□□□ -1.27
KARS-211ENST00000569298 MSL1Q68DK7 614 aa7.11□□□□□ -1.27
KARS-211ENST00000569298 IRGCQ6NXR0 463 aa7.11□□□□□ -1.27
KARS-211ENST00000569298 KDM7AQ6ZMT4 941 aa7.11□□□□□ -1.27
KARS-211ENST00000569298 RAB11FIP4Q86YS3 637 aa7.11□□□□□ -1.27
KARS-211ENST00000569298 NPAS3Q8IXF0 933 aa7.11□□□□□ -1.27
KARS-211ENST00000569298 SAMD14Q8IZD0 417 aaPredicted RBP7.11□□□□□ -1.27
KARS-211ENST00000569298 MEIOBQ8N635 442 aa7.11□□□□□ -1.27
KARS-211ENST00000569298 ARFGAP2Q8N6H7 521 aa7.11□□□□□ -1.27
KARS-211ENST00000569298 ZNF473Q8WTR7 871 aaKnown RBP7.11□□□□□ -1.27
KARS-211ENST00000569298 FRS2Q8WU20 508 aa7.11□□□□□ -1.27
KARS-211ENST00000569298 DPF3Q92784 378 aa7.11□□□□□ -1.27
KARS-211ENST00000569298 SKA1Q96BD8 255 aa7.11□□□□□ -1.27
KARS-211ENST00000569298 IQCDQ96DY2 449 aa7.11□□□□□ -1.27
KARS-211ENST00000569298 STAMBPL1Q96FJ0 436 aa7.11□□□□□ -1.27
KARS-211ENST00000569298 TUBGCP5Q96RT8 1024 aa7.11□□□□□ -1.27
KARS-211ENST00000569298 MAP3K14Q99558 947 aa7.11□□□□□ -1.27
KARS-211ENST00000569298 SRCIN1Q9C0H9 1055 aa7.11□□□□□ -1.27
KARS-211ENST00000569298 SCAND2PQ9GZW5 306 aaPredicted RBP7.11□□□□□ -1.27
KARS-211ENST00000569298 ATP8A2Q9NTI2 1148 aa7.11□□□□□ -1.27
KARS-211ENST00000569298 DCAF16Q9NXF7 216 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms