RNA–Protein interactions for RNA: ENST00000568799.1

GGA2-212, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 5

Gene GGA2, Length 1,403 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-212ENST00000568799 COL9A3Q14050 684 aaPredicted RBP24.36■■□□□ 1.49
GGA2-212ENST00000568799 PGM5Q15124 567 aa24.36■■□□□ 1.49
GGA2-212ENST00000568799 FAM47CQ5HY64 1035 aa24.36■■□□□ 1.49
GGA2-212ENST00000568799 C9orf50Q5SZB4 431 aa24.36■■□□□ 1.49
GGA2-212ENST00000568799 SRBD1Q8N5C6 995 aaKnown RBP24.36■■□□□ 1.49
GGA2-212ENST00000568799 SMARCC2Q8TAQ2 1214 aa24.36■■□□□ 1.49
GGA2-212ENST00000568799 GRIN2DO15399 1336 aa24.36■■□□□ 1.49
GGA2-212ENST00000568799 SUPT20HL2P0C7V6 817 aa24.35■■□□□ 1.49
GGA2-212ENST00000568799 VSIG10LQ86VR7 867 aa24.35■■□□□ 1.49
GGA2-212ENST00000568799 RASEFQ8IZ41 740 aa24.35■■□□□ 1.49
GGA2-212ENST00000568799 CMTR1Q8N1G2 835 aaKnown RBP24.35■■□□□ 1.49
GGA2-212ENST00000568799 AFG1LQ8WV93 481 aa24.35■■□□□ 1.49
GGA2-212ENST00000568799 RNPC3Q96LT9 517 aaKnown RBP24.35■■□□□ 1.49
GGA2-212ENST00000568799 HIPK3Q9H422 1215 aa24.35■■□□□ 1.49
GGA2-212ENST00000568799 RBM28Q9NW13 759 aaKnown RBP24.35■■□□□ 1.49
GGA2-212ENST00000568799 DDX41Q9UJV9 622 aaKnown RBP24.35■■□□□ 1.49
GGA2-212ENST00000568799 CCDC82Q8N4S0 544 aa24.35■■□□□ 1.49
GGA2-212ENST00000568799 TRPV6Q9H1D0 765 aa24.35■■□□□ 1.49
GGA2-212ENST00000568799 ALDH8A1Q9H2A2 487 aaPredicted RBP24.35■■□□□ 1.49
GGA2-212ENST00000568799 ZBTB43O43298 467 aa24.34■■□□□ 1.49
GGA2-212ENST00000568799 B4GALT4O60513 344 aa24.34■■□□□ 1.49
GGA2-212ENST00000568799 CASTP20810 708 aaKnown RBP24.34■■□□□ 1.49
GGA2-212ENST00000568799 CHMP4BP1P59074 171 aa24.34■■□□□ 1.49
GGA2-212ENST00000568799 EXOSC10Q01780 885 aaKnown RBP24.34■■□□□ 1.49
GGA2-212ENST00000568799 ARHGAP1Q07960 439 aa24.34■■□□□ 1.49
GGA2-212ENST00000568799 LAMC2Q13753 1193 aa24.34■■□□□ 1.49
GGA2-212ENST00000568799 ADCK5Q3MIX3 580 aa24.34■■□□□ 1.49
GGA2-212ENST00000568799 GNPTABQ3T906 1256 aa24.34■■□□□ 1.49
GGA2-212ENST00000568799 APOA5Q6Q788 366 aa24.34■■□□□ 1.49
GGA2-212ENST00000568799 TMTC3Q6ZXV5 915 aa24.34■■□□□ 1.49
GGA2-212ENST00000568799 DHX37Q8IY37 1157 aaKnown RBP24.34■■□□□ 1.49
GGA2-212ENST00000568799 DEFB123Q8N688 67 aa24.34■■□□□ 1.49
GGA2-212ENST00000568799 TCEANC2Q96MN5 208 aa24.34■■□□□ 1.49
GGA2-212ENST00000568799 MMP3P08254 477 aa24.33■■□□□ 1.49
GGA2-212ENST00000568799 DGKDQ16760 1214 aa24.33■■□□□ 1.49
GGA2-212ENST00000568799 NBPF20Q3BBV1 942 aa24.33■■□□□ 1.49
GGA2-212ENST00000568799 EMID1Q96A84 441 aaPredicted RBP24.33■■□□□ 1.49
GGA2-212ENST00000568799 NAP1L2Q9ULW6 460 aaPredicted RBP24.33■■□□□ 1.49
GGA2-212ENST00000568799 STAM2O75886 525 aa24.32■■□□□ 1.48
GGA2-212ENST00000568799 TGFB3P10600 412 aa24.32■■□□□ 1.48
GGA2-212ENST00000568799 CYP2C18P33260 490 aa24.32■■□□□ 1.48
GGA2-212ENST00000568799 RTN1Q16799 776 aa24.32■■□□□ 1.48
GGA2-212ENST00000568799 NFRKBQ6P4R8 1299 aa24.32■■□□□ 1.48
GGA2-212ENST00000568799 NOD1Q9Y239 953 aa24.32■■□□□ 1.48
GGA2-212ENST00000568799 CSF2RAP15509 400 aa24.31■■□□□ 1.48
GGA2-212ENST00000568799 HSPA4P34932 840 aa24.31■■□□□ 1.48
GGA2-212ENST00000568799 EPHB4P54760 987 aa24.31■■□□□ 1.48
GGA2-212ENST00000568799 PTPN11Q06124 597 aaPredicted RBP24.31■■□□□ 1.48
GGA2-212ENST00000568799 IL31RAQ8NI17 732 aa24.31■■□□□ 1.48
GGA2-212ENST00000568799 JAKMIP1Q96N16 626 aaKnown RBP24.31■■□□□ 1.48
GGA2-212ENST00000568799 PSTPIP2Q9H939 334 aa24.31■■□□□ 1.48
GGA2-212ENST00000568799 TRMT13Q9NUP7 481 aaKnown RBP24.31■■□□□ 1.48
GGA2-212ENST00000568799 KLF18A0A0U1RQI7 1052 aa24.3■■□□□ 1.48
GGA2-212ENST00000568799 PIK3CDO00329 1044 aa24.3■■□□□ 1.48
GGA2-212ENST00000568799 PSRC1Q6PGN9 363 aaPredicted RBP24.3■■□□□ 1.48
GGA2-212ENST00000568799 USP17L6PQ6QN14 398 aa24.3■■□□□ 1.48
GGA2-212ENST00000568799 BLOC1S2Q6QNY1 142 aa24.3■■□□□ 1.48
GGA2-212ENST00000568799 HEATR3Q7Z4Q2 680 aa24.3■■□□□ 1.48
GGA2-212ENST00000568799 PPTC7Q8NI37 304 aa24.3■■□□□ 1.48
GGA2-212ENST00000568799 hCG_1642624A0A1W2PR95 340 aa24.29■■□□□ 1.48
GGA2-212ENST00000568799 GOLGA8AA7E2F4 631 aa24.29■■□□□ 1.48
GGA2-212ENST00000568799 GOLGA8BA8MQT2 603 aa24.29■■□□□ 1.48
GGA2-212ENST00000568799 RGS20O76081 388 aa24.29■■□□□ 1.48
GGA2-212ENST00000568799 PSMA5P28066 241 aa24.29■■□□□ 1.48
GGA2-212ENST00000568799 NOC4LQ9BVI4 516 aaKnown RBP24.29■■□□□ 1.48
GGA2-212ENST00000568799 KATNAL1Q9BW62 490 aa24.29■■□□□ 1.48
GGA2-212ENST00000568799 MLXIPQ9HAP2 919 aa24.29■■□□□ 1.48
GGA2-212ENST00000568799 KIAA1217Q5T5P2 1943 aa24.29■■□□□ 1.48
GGA2-212ENST00000568799 GGPS1O95749 300 aa24.28■■□□□ 1.48
GGA2-212ENST00000568799 SMAD3P84022 425 aaKnown RBP24.28■■□□□ 1.48
GGA2-212ENST00000568799 XRRA1Q6P2D8 792 aa24.28■■□□□ 1.48
GGA2-212ENST00000568799 Q7L0L9 218 aa24.28■■□□□ 1.48
GGA2-212ENST00000568799 KCNB2Q92953 911 aa24.28■■□□□ 1.48
GGA2-212ENST00000568799 SPATA33Q96N06 139 aa24.28■■□□□ 1.48
GGA2-212ENST00000568799 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.28■■□□□ 1.482e-14■■□□□ 12.1
GGA2-212ENST00000568799 BRPF3Q9ULD4 1205 aa24.28■■□□□ 1.48
GGA2-212ENST00000568799 SNX14Q9Y5W7 946 aa24.28■■□□□ 1.48
GGA2-212ENST00000568799 FRMPD4Q14CM0 1322 aa24.28■■□□□ 1.48
GGA2-212ENST00000568799 SPDYE3A6NKU9 549 aa24.27■■□□□ 1.48
GGA2-212ENST00000568799 MEIS2O14770 477 aa24.27■■□□□ 1.48
GGA2-212ENST00000568799 RCAN1P53805 252 aa24.27■■□□□ 1.48
GGA2-212ENST00000568799 CCL23P55773 120 aa24.27■■□□□ 1.48
GGA2-212ENST00000568799 CELF3Q5SZQ8 465 aaKnown RBP24.27■■□□□ 1.48
GGA2-212ENST00000568799 ZNF697Q5TEC3 545 aa24.27■■□□□ 1.48
GGA2-212ENST00000568799 ZFP91Q96JP5 570 aaPredicted RBP24.27■■□□□ 1.48
GGA2-212ENST00000568799 MTIF3Q9H2K0 278 aaKnown RBP24.27■■□□□ 1.48
GGA2-212ENST00000568799 IL23AQ9NPF7 189 aa24.27■■□□□ 1.48
GGA2-212ENST00000568799 CCDC196A0A1B0GTZ2 297 aa24.27■■□□□ 1.48
GGA2-212ENST00000568799 CYP2C9P11712 490 aa24.27■■□□□ 1.48
GGA2-212ENST00000568799 UBA1P22314 1058 aaKnown RBP24.27■■□□□ 1.48
GGA2-212ENST00000568799 MYSM1Q5VVJ2 828 aa24.27■■□□□ 1.48
GGA2-212ENST00000568799 FAM109BQ6ICB4 259 aaPredicted RBP24.27■■□□□ 1.48
GGA2-212ENST00000568799 RPUSD2Q8IZ73 545 aaKnown RBP24.27■■□□□ 1.48
GGA2-212ENST00000568799 SCN10AQ9Y5Y9 1956 aa24.26■■□□□ 1.47
GGA2-212ENST00000568799 LAMA2P24043 3122 aaKnown RBP24.26■■□□□ 1.47
GGA2-212ENST00000568799 FIBPO43427 364 aa24.26■■□□□ 1.47
GGA2-212ENST00000568799 EPB41L2O43491 1005 aaKnown RBP24.26■■□□□ 1.47
GGA2-212ENST00000568799 SORBS3O60504 671 aa24.26■■□□□ 1.47
GGA2-212ENST00000568799 PPFIA4O75335 1185 aa24.26■■□□□ 1.47
GGA2-212ENST00000568799 ACRP10323 421 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms