RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 CTAGE1Q96RT6 745 aa18.41■□□□□ 0.54
HERPUD1-215ENST00000568676 RMDN3Q96TC7 470 aa18.41■□□□□ 0.54
HERPUD1-215ENST00000568676 KAT14Q9H8E8 782 aa18.41■□□□□ 0.54
HERPUD1-215ENST00000568676 PRRC2BQ5JSZ5 2229 aaKnown RBP18.41■□□□□ 0.54
HERPUD1-215ENST00000568676 EIF3JO75822 258 aaKnown RBP18.4■□□□□ 0.54
HERPUD1-215ENST00000568676 CHMP4BP1P59074 171 aa18.4■□□□□ 0.54
HERPUD1-215ENST00000568676 NMIQ13287 307 aaPredicted RBP18.4■□□□□ 0.54
HERPUD1-215ENST00000568676 PTK7Q13308 1070 aa18.4■□□□□ 0.54
HERPUD1-215ENST00000568676 HDAC1Q13547 482 aaPredicted RBP18.4■□□□□ 0.54
HERPUD1-215ENST00000568676 LAMC2Q13753 1193 aa18.4■□□□□ 0.54
HERPUD1-215ENST00000568676 LY6KQ17RY6 165 aa18.4■□□□□ 0.54
HERPUD1-215ENST00000568676 TBC1D10CQ8IV04 446 aa18.4■□□□□ 0.54
HERPUD1-215ENST00000568676 KAT2BQ92831 832 aa18.4■□□□□ 0.54
HERPUD1-215ENST00000568676 RAD9AQ99638 391 aa18.4■□□□□ 0.54
HERPUD1-215ENST00000568676 MAP3K20Q9NYL2 800 aaKnown RBP18.4■□□□□ 0.54
HERPUD1-215ENST00000568676 TRIM6-TRIM34B2RNG4 842 aa18.39■□□□□ 0.53
HERPUD1-215ENST00000568676 LPXNO60711 386 aa18.39■□□□□ 0.53
HERPUD1-215ENST00000568676 ARHGEF15O94989 841 aa18.39■□□□□ 0.53
HERPUD1-215ENST00000568676 GJB5O95377 273 aa18.39■□□□□ 0.53
HERPUD1-215ENST00000568676 GOLGA8HP0CJ92 632 aa18.39■□□□□ 0.53
HERPUD1-215ENST00000568676 CKBP12277 381 aa18.39■□□□□ 0.53
HERPUD1-215ENST00000568676 IKBKEQ14164 716 aa18.39■□□□□ 0.53
HERPUD1-215ENST00000568676 ARHGEF16Q5VV41 709 aa18.39■□□□□ 0.53
HERPUD1-215ENST00000568676 KCNV1Q6PIU1 500 aa18.39■□□□□ 0.53
HERPUD1-215ENST00000568676 ADGRF4Q8IZF3 695 aa18.39■□□□□ 0.53
HERPUD1-215ENST00000568676 SAMD3Q8N6K7 520 aa18.39■□□□□ 0.53
HERPUD1-215ENST00000568676 PPTC7Q8NI37 304 aa18.39■□□□□ 0.53
HERPUD1-215ENST00000568676 TAAR1Q96RJ0 339 aa18.39■□□□□ 0.53
HERPUD1-215ENST00000568676 TGS1Q96RS0 853 aaKnown RBP18.39■□□□□ 0.53
HERPUD1-215ENST00000568676 UBA5Q9GZZ9 404 aa18.39■□□□□ 0.53
HERPUD1-215ENST00000568676 DDX41Q9UJV9 622 aaKnown RBP18.39■□□□□ 0.53
HERPUD1-215ENST00000568676 HCN4Q9Y3Q4 1203 aa18.39■□□□□ 0.53
HERPUD1-215ENST00000568676 F2P00734 622 aa18.38■□□□□ 0.53
HERPUD1-215ENST00000568676 GPNMBQ14956 572 aa18.38■□□□□ 0.53
HERPUD1-215ENST00000568676 KRT40Q6A162 431 aa18.38■□□□□ 0.53
HERPUD1-215ENST00000568676 FBXO11Q86XK2 927 aa18.38■□□□□ 0.53
HERPUD1-215ENST00000568676 PPP1R13LQ8WUF5 828 aa18.38■□□□□ 0.53
HERPUD1-215ENST00000568676 DHX38Q92620 1227 aaKnown RBP18.38■□□□□ 0.53
HERPUD1-215ENST00000568676 RAPGEFL1Q9UHV5 662 aa18.38■□□□□ 0.53
HERPUD1-215ENST00000568676 MRVI1Q9Y6F6 885 aa18.38■□□□□ 0.53
HERPUD1-215ENST00000568676 TCF20Q9UGU0 1960 aaKnown RBP18.38■□□□□ 0.53
HERPUD1-215ENST00000568676 EMSYQ7Z589 1322 aa18.38■□□□□ 0.53
HERPUD1-215ENST00000568676 HAS3O00219 553 aa18.37■□□□□ 0.53
HERPUD1-215ENST00000568676 NBNO60934 754 aa18.37■□□□□ 0.53
HERPUD1-215ENST00000568676 PPFIA4O75335 1185 aa18.37■□□□□ 0.53
HERPUD1-215ENST00000568676 HOXD8P13378 290 aaPredicted RBP18.37■□□□□ 0.53
HERPUD1-215ENST00000568676 PSEN2P49810 448 aa18.37■□□□□ 0.53
HERPUD1-215ENST00000568676 ERVK-21P61565 698 aa18.37■□□□□ 0.53
HERPUD1-215ENST00000568676 GHRHRQ02643 423 aa18.37■□□□□ 0.53
HERPUD1-215ENST00000568676 MFSD10Q14728 455 aa18.37■□□□□ 0.53
HERPUD1-215ENST00000568676 CHST3Q7LGC8 479 aa18.37■□□□□ 0.53
HERPUD1-215ENST00000568676 ZSCAN10Q96SZ4 725 aaPredicted RBP18.37■□□□□ 0.53
HERPUD1-215ENST00000568676 ZKSCAN3Q9BRR0 538 aa18.37■□□□□ 0.53
HERPUD1-215ENST00000568676 COL20A1Q9P218 1284 aa18.37■□□□□ 0.53
HERPUD1-215ENST00000568676 HDAC6Q9UBN7 1215 aa18.37■□□□□ 0.53
HERPUD1-215ENST00000568676 NEDD4P46934 1319 aa18.37■□□□□ 0.53
HERPUD1-215ENST00000568676 DHX16O60231 1041 aaKnown RBP18.36■□□□□ 0.53
HERPUD1-215ENST00000568676 REV3LO60673 3130 aa18.36■□□□□ 0.53
HERPUD1-215ENST00000568676 KDM4AO75164 1064 aa18.36■□□□□ 0.53
HERPUD1-215ENST00000568676 NR3C2P08235 984 aa18.36■□□□□ 0.53
HERPUD1-215ENST00000568676 PARP1P09874 1014 aaKnown RBP18.36■□□□□ 0.53
HERPUD1-215ENST00000568676 DEFB103AP81534 67 aa18.36■□□□□ 0.53
HERPUD1-215ENST00000568676 TRAF1Q13077 416 aa18.36■□□□□ 0.53
HERPUD1-215ENST00000568676 AAMPQ13685 434 aa18.36■□□□□ 0.53
HERPUD1-215ENST00000568676 KIAA0753Q2KHM9 967 aa18.36■□□□□ 0.53
HERPUD1-215ENST00000568676 QRICH1Q2TAL8 776 aa18.36■□□□□ 0.53
HERPUD1-215ENST00000568676 TMEM31Q5JXX7 168 aa18.36■□□□□ 0.53
HERPUD1-215ENST00000568676 KIAA1217Q5T5P2 1943 aa18.36■□□□□ 0.53
HERPUD1-215ENST00000568676 DHX37Q8IY37 1157 aaKnown RBP18.36■□□□□ 0.53
HERPUD1-215ENST00000568676 TET1Q8NFU7 2136 aa18.36■□□□□ 0.53
HERPUD1-215ENST00000568676 TBC1D5Q92609 795 aa18.36■□□□□ 0.53
HERPUD1-215ENST00000568676 RILPL2Q969X0 211 aa18.36■□□□□ 0.53
HERPUD1-215ENST00000568676 AMNQ9BXJ7 453 aa18.36■□□□□ 0.53
HERPUD1-215ENST00000568676 PXMP2Q9NR77 195 aa18.36■□□□□ 0.53
HERPUD1-215ENST00000568676 LCHNA4D1U4 455 aa18.35■□□□□ 0.53
HERPUD1-215ENST00000568676 HIP1O00291 1037 aa18.35■□□□□ 0.53
HERPUD1-215ENST00000568676 TGFB3P10600 412 aa18.35■□□□□ 0.53
HERPUD1-215ENST00000568676 SDSP20132 328 aa18.35■□□□□ 0.53
HERPUD1-215ENST00000568676 HSD17B4P51659 736 aa18.35■□□□□ 0.53
HERPUD1-215ENST00000568676 CRBNQ96SW2 442 aa18.35■□□□□ 0.53
HERPUD1-215ENST00000568676 ALG1Q9BT22 464 aa18.35■□□□□ 0.53
HERPUD1-215ENST00000568676 LRFN3Q9BTN0 628 aa18.35■□□□□ 0.53
HERPUD1-215ENST00000568676 KRT23Q9C075 422 aa18.35■□□□□ 0.53
HERPUD1-215ENST00000568676 CPVLQ9H3G5 476 aa18.35■□□□□ 0.53
HERPUD1-215ENST00000568676 JMJD4Q9H9V9 463 aa18.35■□□□□ 0.53
HERPUD1-215ENST00000568676 SUGCTQ9HAC7 445 aa18.35■□□□□ 0.53
HERPUD1-215ENST00000568676 CTNNA3Q9UI47 895 aa18.35■□□□□ 0.53
HERPUD1-215ENST00000568676 INSL6Q9Y581 213 aa18.35■□□□□ 0.53
HERPUD1-215ENST00000568676 TRIP12Q14669 1992 aaPredicted RBP18.35■□□□□ 0.53
HERPUD1-215ENST00000568676 COL4A4P53420 1690 aaPredicted RBP18.34■□□□□ 0.53
HERPUD1-215ENST00000568676 LINC01553A4QN01 128 aa18.34■□□□□ 0.53
HERPUD1-215ENST00000568676 GPR37L1O60883 481 aa18.34■□□□□ 0.53
HERPUD1-215ENST00000568676 LGR5O75473 907 aa18.34■□□□□ 0.53
HERPUD1-215ENST00000568676 EIF2AK2P19525 551 aaKnown RBP18.34■□□□□ 0.53
HERPUD1-215ENST00000568676 RRP1P56182 461 aaKnown RBP18.34■□□□□ 0.53
HERPUD1-215ENST00000568676 IMMTQ16891 758 aaKnown RBP18.34■□□□□ 0.53
HERPUD1-215ENST00000568676 ENAHQ8N8S7 591 aaPredicted RBP18.34■□□□□ 0.53
HERPUD1-215ENST00000568676 GDPD5Q8WTR4 605 aa18.34■□□□□ 0.53
HERPUD1-215ENST00000568676 SAMD11Q96NU1 681 aa18.34■□□□□ 0.53
HERPUD1-215ENST00000568676 EPHX3Q9H6B9 360 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms