RNA–Protein interactions for RNA: ENST00000568423.5

SCAMP5-218, Transcript of secretory carrier membrane protein 5, humanhuman

TSL 3

Gene SCAMP5, Length 1,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP5-218ENST00000568423 ST3GAL1Q11201 340 aa20.62■□□□□ 0.89
SCAMP5-218ENST00000568423 TRAF1Q13077 416 aa20.62■□□□□ 0.89
SCAMP5-218ENST00000568423 FSCN1Q16658 493 aaKnown RBP20.62■□□□□ 0.89
SCAMP5-218ENST00000568423 WWC2Q6AWC2 1192 aa20.62■□□□□ 0.89
SCAMP5-218ENST00000568423 TAPT1Q6NXT6 567 aa20.62■□□□□ 0.89
SCAMP5-218ENST00000568423 RGS22Q8NE09 1264 aa20.62■□□□□ 0.89
SCAMP5-218ENST00000568423 DNERQ8NFT8 737 aa20.62■□□□□ 0.89
SCAMP5-218ENST00000568423 MORC4Q8TE76 937 aa20.62■□□□□ 0.89
SCAMP5-218ENST00000568423 GPKOWQ92917 476 aaPredicted RBP eCLIP20.62■□□□□ 0.89
SCAMP5-218ENST00000568423 PHKBQ93100 1093 aa20.62■□□□□ 0.89
SCAMP5-218ENST00000568423 GTF3C6Q969F1 213 aa20.62■□□□□ 0.89
SCAMP5-218ENST00000568423 PURBQ96QR8 312 aaKnown RBP20.62■□□□□ 0.89
SCAMP5-218ENST00000568423 MAF1Q9H063 256 aa20.62■□□□□ 0.89
SCAMP5-218ENST00000568423 SLKQ9H2G2 1235 aaPredicted RBP20.62■□□□□ 0.89
SCAMP5-218ENST00000568423 PDGFCQ9NRA1 345 aa20.62■□□□□ 0.89
SCAMP5-218ENST00000568423 SHHQ15465 462 aa20.61■□□□□ 0.89
SCAMP5-218ENST00000568423 RNF26Q9BY78 433 aaPredicted RBP20.61■□□□□ 0.89
SCAMP5-218ENST00000568423 SEZ6LQ9BYH1 1024 aa20.61■□□□□ 0.89
SCAMP5-218ENST00000568423 WDR11Q9BZH6 1224 aa20.61■□□□□ 0.89
SCAMP5-218ENST00000568423 V9GY48 417 aaPredicted RBP20.61■□□□□ 0.89
SCAMP5-218ENST00000568423 PPFIA3O75145 1194 aa20.6■□□□□ 0.89
SCAMP5-218ENST00000568423 CD2BP2O95400 341 aaKnown RBP20.6■□□□□ 0.89
SCAMP5-218ENST00000568423 CDK7P50613 346 aa20.6■□□□□ 0.89
SCAMP5-218ENST00000568423 HSD17B4P51659 736 aa20.6■□□□□ 0.89
SCAMP5-218ENST00000568423 FPGSQ05932 587 aa20.6■□□□□ 0.89
SCAMP5-218ENST00000568423 PKN1Q16512 942 aa20.6■□□□□ 0.89
SCAMP5-218ENST00000568423 DUSP28Q4G0W2 176 aa20.6■□□□□ 0.89
SCAMP5-218ENST00000568423 BRDTQ58F21 947 aaPredicted RBP20.6■□□□□ 0.89
SCAMP5-218ENST00000568423 TYW1BQ6NUM6 668 aa20.6■□□□□ 0.89
SCAMP5-218ENST00000568423 CXCL17Q6UXB2 119 aa20.6■□□□□ 0.89
SCAMP5-218ENST00000568423 HEATR3Q7Z4Q2 680 aa20.6■□□□□ 0.89
SCAMP5-218ENST00000568423 MCF2L2Q86YR7 1114 aa20.6■□□□□ 0.89
SCAMP5-218ENST00000568423 TBC1D5Q92609 795 aa20.6■□□□□ 0.89
SCAMP5-218ENST00000568423 COL20A1Q9P218 1284 aa20.6■□□□□ 0.89
SCAMP5-218ENST00000568423 DDX49Q9Y6V7 483 aaKnown RBP20.6■□□□□ 0.89
SCAMP5-218ENST00000568423 LTBP2Q14767 1821 aa20.6■□□□□ 0.89
SCAMP5-218ENST00000568423 hCG_1984214I3L0E3 225 aa20.59■□□□□ 0.89
SCAMP5-218ENST00000568423 STXBP3O00186 592 aa20.59■□□□□ 0.89
SCAMP5-218ENST00000568423 CPLX1O14810 134 aa20.59■□□□□ 0.89
SCAMP5-218ENST00000568423 PRPF3O43395 683 aaKnown RBP20.59■□□□□ 0.89
SCAMP5-218ENST00000568423 TIMP1P01033 207 aa20.59■□□□□ 0.89
SCAMP5-218ENST00000568423 PFKFB3Q16875 520 aaPredicted RBP20.59■□□□□ 0.89
SCAMP5-218ENST00000568423 PPP1R18Q6NYC8 613 aa20.59■□□□□ 0.89
SCAMP5-218ENST00000568423 Q7L0L9 218 aa20.59■□□□□ 0.89
SCAMP5-218ENST00000568423 ZNF713Q8N859 430 aaPredicted RBP20.59■□□□□ 0.89
SCAMP5-218ENST00000568423 NECAB1Q8N987 351 aa20.59■□□□□ 0.89
SCAMP5-218ENST00000568423 SYTL5Q8TDW5 730 aaPredicted RBP20.59■□□□□ 0.89
SCAMP5-218ENST00000568423 SLC26A6Q9BXS9 759 aa20.59■□□□□ 0.89
SCAMP5-218ENST00000568423 LIMCH1Q9UPQ0 1083 aa20.59■□□□□ 0.89
SCAMP5-218ENST00000568423 CTAGE5O15320 804 aa20.58■□□□□ 0.89
SCAMP5-218ENST00000568423 ST18O60284 1047 aa20.58■□□□□ 0.89
SCAMP5-218ENST00000568423 CTDNEP1O95476 244 aa20.58■□□□□ 0.89
SCAMP5-218ENST00000568423 SCG2P13521 617 aa20.58■□□□□ 0.89
SCAMP5-218ENST00000568423 ITGB8P26012 769 aa20.58■□□□□ 0.89
SCAMP5-218ENST00000568423 C9orf50Q5SZB4 431 aa20.58■□□□□ 0.89
SCAMP5-218ENST00000568423 IL27Q8NEV9 243 aa20.58■□□□□ 0.89
SCAMP5-218ENST00000568423 BARHL2Q9NY43 387 aa20.58■□□□□ 0.89
SCAMP5-218ENST00000568423 STK36Q9NRP7 1315 aa20.57■□□□□ 0.88
SCAMP5-218ENST00000568423 NKRFO15226 690 aaKnown RBP eCLIP20.57■□□□□ 0.88
SCAMP5-218ENST00000568423 CFBP00751 764 aa20.57■□□□□ 0.88
SCAMP5-218ENST00000568423 CPT1AP50416 773 aa20.57■□□□□ 0.88
SCAMP5-218ENST00000568423 ITGA7Q13683 1181 aa20.57■□□□□ 0.88
SCAMP5-218ENST00000568423 CPLX2Q6PUV4 134 aaKnown RBP20.57■□□□□ 0.88
SCAMP5-218ENST00000568423 TMEM199Q8N511 208 aa20.57■□□□□ 0.88
SCAMP5-218ENST00000568423 RNPC3Q96LT9 517 aaKnown RBP20.57■□□□□ 0.88
SCAMP5-218ENST00000568423 POLR3EQ9NVU0 708 aa20.57■□□□□ 0.88
SCAMP5-218ENST00000568423 CDKL5O76039 1030 aa20.56■□□□□ 0.88
SCAMP5-218ENST00000568423 HOXA13P31271 388 aaPredicted RBP20.56■□□□□ 0.88
SCAMP5-218ENST00000568423 PPIGQ13427 754 aaKnown RBP eCLIP20.56■□□□□ 0.88
SCAMP5-218ENST00000568423 ZNF697Q5TEC3 545 aa20.56■□□□□ 0.88
SCAMP5-218ENST00000568423 FAM109BQ6ICB4 259 aaPredicted RBP20.56■□□□□ 0.88
SCAMP5-218ENST00000568423 MFSD5Q6N075 450 aa20.56■□□□□ 0.88
SCAMP5-218ENST00000568423 FAM126BQ8IXS8 530 aa20.56■□□□□ 0.88
SCAMP5-218ENST00000568423 TRIM22Q8IYM9 498 aa20.56■□□□□ 0.88
SCAMP5-218ENST00000568423 SAMD3Q8N6K7 520 aa20.56■□□□□ 0.88
SCAMP5-218ENST00000568423 OR6J1Q8NGC5 347 aa20.56■□□□□ 0.88
SCAMP5-218ENST00000568423 SCFD2Q8WU76 684 aa20.56■□□□□ 0.88
SCAMP5-218ENST00000568423 MTMR10Q9NXD2 777 aa20.56■□□□□ 0.88
SCAMP5-218ENST00000568423 TBX21Q9UL17 535 aa20.56■□□□□ 0.88
SCAMP5-218ENST00000568423 FRMPD4Q14CM0 1322 aa20.55■□□□□ 0.88
SCAMP5-218ENST00000568423 RBM47A0AV96 593 aaKnown RBP20.55■□□□□ 0.88
SCAMP5-218ENST00000568423 GCOM1H8Y6P7 765 aaPredicted RBP20.55■□□□□ 0.88
SCAMP5-218ENST00000568423 PIK3CDO00329 1044 aa20.55■□□□□ 0.88
SCAMP5-218ENST00000568423 DTNBO60941 627 aa20.55■□□□□ 0.88
SCAMP5-218ENST00000568423 POLR2MP0CAP2 368 aa20.55■□□□□ 0.88
SCAMP5-218ENST00000568423 EDNRBP24530 442 aa20.55■□□□□ 0.88
SCAMP5-218ENST00000568423 NAPAP54920 295 aa20.55■□□□□ 0.88
SCAMP5-218ENST00000568423 TTLL4Q14679 1199 aa20.55■□□□□ 0.88
SCAMP5-218ENST00000568423 NSUN7Q8NE18 718 aaKnown RBP20.55■□□□□ 0.88
SCAMP5-218ENST00000568423 NSUN6Q8TEA1 469 aaKnown RBP20.55■□□□□ 0.88
SCAMP5-218ENST00000568423 MAP3K20Q9NYL2 800 aaKnown RBP20.55■□□□□ 0.88
SCAMP5-218ENST00000568423 MEIS2O14770 477 aa20.54■□□□□ 0.88
SCAMP5-218ENST00000568423 DEXIO95424 95 aa20.54■□□□□ 0.88
SCAMP5-218ENST00000568423 TXNP10599 105 aaKnown RBP20.54■□□□□ 0.88
SCAMP5-218ENST00000568423 SMAD3P84022 425 aaKnown RBP20.54■□□□□ 0.88
SCAMP5-218ENST00000568423 AKAP17AQ02040 695 aaKnown RBP20.54■□□□□ 0.88
SCAMP5-218ENST00000568423 SSRP1Q08945 709 aaKnown RBP20.54■□□□□ 0.88
SCAMP5-218ENST00000568423 CCDC83Q8IWF9 413 aa20.54■□□□□ 0.88
SCAMP5-218ENST00000568423 ZSCAN31Q96LW9 406 aaPredicted RBP20.54■□□□□ 0.88
SCAMP5-218ENST00000568423 IWS1Q96ST2 819 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms