RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 DEFB132Q7Z7B7 95 aa7.25□□□□□ -1.25
CAPN3-218ENST00000568153 C2CD5Q86YS7 1000 aa7.25□□□□□ -1.25
CAPN3-218ENST00000568153 KLHL23Q8NBE8 558 aa7.25□□□□□ -1.25
CAPN3-218ENST00000568153 TDRD7Q8NHU6 1098 aaKnown RBP7.25□□□□□ -1.25
CAPN3-218ENST00000568153 WDR66Q8TBY9 1149 aa7.25□□□□□ -1.25
CAPN3-218ENST00000568153 INTS4Q96HW7 963 aaKnown RBP7.25□□□□□ -1.25
CAPN3-218ENST00000568153 ANP32EQ9BTT0 268 aa7.25□□□□□ -1.25
CAPN3-218ENST00000568153 NACAP1Q9BZK3 213 aa7.25□□□□□ -1.25
CAPN3-218ENST00000568153 OSGEPQ9NPF4 335 aa7.25□□□□□ -1.25
CAPN3-218ENST00000568153 ANKRD36CQ5JPF3 1778 aa7.24□□□□□ -1.25
CAPN3-218ENST00000568153 RBM47A0AV96 593 aaKnown RBP7.24□□□□□ -1.25
CAPN3-218ENST00000568153 E7EWF7 191 aa7.24□□□□□ -1.25
CAPN3-218ENST00000568153 DDX3YO15523 660 aaKnown RBP7.24□□□□□ -1.25
CAPN3-218ENST00000568153 ADAM11O75078 769 aa7.24□□□□□ -1.25
CAPN3-218ENST00000568153 B3GALT4O96024 378 aa7.24□□□□□ -1.25
CAPN3-218ENST00000568153 LDHCP07864 332 aa7.24□□□□□ -1.25
CAPN3-218ENST00000568153 CPA1P15085 419 aa7.24□□□□□ -1.25
CAPN3-218ENST00000568153 KLRK1P26718 216 aa7.24□□□□□ -1.25
CAPN3-218ENST00000568153 NOS3P29474 1203 aa7.24□□□□□ -1.25
CAPN3-218ENST00000568153 CD68P34810 354 aaPredicted RBP7.24□□□□□ -1.25
CAPN3-218ENST00000568153 DDIT3P35638 169 aa7.24□□□□□ -1.25
CAPN3-218ENST00000568153 AK2P54819 239 aa7.24□□□□□ -1.25
CAPN3-218ENST00000568153 NUCB2P80303 420 aa7.24□□□□□ -1.25
CAPN3-218ENST00000568153 C19orf57Q0VDD7 668 aa7.24□□□□□ -1.25
CAPN3-218ENST00000568153 CHAF1AQ13111 956 aaPredicted RBP7.24□□□□□ -1.25
CAPN3-218ENST00000568153 RPS26P11Q5JNZ5 115 aaPredicted RBP7.24□□□□□ -1.25
CAPN3-218ENST00000568153 TTLL5Q6EMB2 1281 aa7.24□□□□□ -1.25
CAPN3-218ENST00000568153 NAA16Q6N069 864 aaPredicted RBP7.24□□□□□ -1.25
CAPN3-218ENST00000568153 NOL8Q76FK4 1167 aaKnown RBP7.24□□□□□ -1.25
CAPN3-218ENST00000568153 TBC1D16Q8TBP0 767 aa7.24□□□□□ -1.25
CAPN3-218ENST00000568153 WFDC12Q8WWY7 111 aa7.24□□□□□ -1.25
CAPN3-218ENST00000568153 ZC3H12CQ9C0D7 883 aaKnown RBP7.24□□□□□ -1.25
CAPN3-218ENST00000568153 SOX17Q9H6I2 414 aaPredicted RBP7.24□□□□□ -1.25
CAPN3-218ENST00000568153 CD209Q9NNX6 404 aa7.24□□□□□ -1.25
CAPN3-218ENST00000568153 POLLQ9UGP5 575 aa7.24□□□□□ -1.25
CAPN3-218ENST00000568153 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.24□□□□□ -1.25
CAPN3-218ENST00000568153 SLC4A4Q9Y6R1 1079 aa7.24□□□□□ -1.25
CAPN3-218ENST00000568153 BRWD3Q6RI45 1802 aa7.24□□□□□ -1.25
CAPN3-218ENST00000568153 RPAP1Q9BWH6 1393 aaPredicted RBP7.23□□□□□ -1.25
CAPN3-218ENST00000568153 MBD4O95243 580 aa7.23□□□□□ -1.25
CAPN3-218ENST00000568153 IL1R1P14778 569 aa7.23□□□□□ -1.25
CAPN3-218ENST00000568153 ARL4DP49703 201 aa7.23□□□□□ -1.25
CAPN3-218ENST00000568153 ZNF157P51786 506 aaPredicted RBP7.23□□□□□ -1.25
CAPN3-218ENST00000568153 GSTO1P78417 241 aa7.23□□□□□ -1.25
CAPN3-218ENST00000568153 EXOSC10Q01780 885 aaKnown RBP7.23□□□□□ -1.25
CAPN3-218ENST00000568153 MECOMQ03112 1051 aa7.23□□□□□ -1.25
CAPN3-218ENST00000568153 TRDNQ13061 729 aa7.23□□□□□ -1.25
CAPN3-218ENST00000568153 NFKBIBQ15653 356 aa7.23□□□□□ -1.25
CAPN3-218ENST00000568153 DPP8Q6V1X1 898 aaPredicted RBP7.23□□□□□ -1.25
CAPN3-218ENST00000568153 Q6ZUG5 572 aa7.23□□□□□ -1.25
CAPN3-218ENST00000568153 IFNL3Q8IZI9 196 aa7.23□□□□□ -1.25
CAPN3-218ENST00000568153 NSUN4Q96CB9 384 aaKnown RBP7.23□□□□□ -1.25
CAPN3-218ENST00000568153 CHMP4CQ96CF2 233 aa7.23□□□□□ -1.25
CAPN3-218ENST00000568153 EYA3Q99504 573 aa7.23□□□□□ -1.25
CAPN3-218ENST00000568153 COA1Q9GZY4 146 aa7.23□□□□□ -1.25
CAPN3-218ENST00000568153 ARMT1Q9H993 441 aa7.23□□□□□ -1.25
CAPN3-218ENST00000568153 IRS2Q9Y4H2 1338 aa7.23□□□□□ -1.25
CAPN3-218ENST00000568153 GSG1L2A8MUP6 293 aa7.22□□□□□ -1.25
CAPN3-218ENST00000568153 SORBS3O60504 671 aa7.22□□□□□ -1.25
CAPN3-218ENST00000568153 FBXO24O75426 580 aa7.22□□□□□ -1.25
CAPN3-218ENST00000568153 WISP1O95388 367 aa7.22□□□□□ -1.25
CAPN3-218ENST00000568153 BAG3O95817 575 aa7.22□□□□□ -1.25
CAPN3-218ENST00000568153 CTSHP09668 335 aa7.22□□□□□ -1.25
CAPN3-218ENST00000568153 MCM5P33992 734 aa7.22□□□□□ -1.25
CAPN3-218ENST00000568153 IREB2P48200 963 aaKnown RBP7.22□□□□□ -1.25
CAPN3-218ENST00000568153 NLRP12P59046 1061 aa7.22□□□□□ -1.25
CAPN3-218ENST00000568153 GSTM4Q03013 218 aa7.22□□□□□ -1.25
CAPN3-218ENST00000568153 GIMAP6Q6P9H5 292 aa7.22□□□□□ -1.25
CAPN3-218ENST00000568153 TMEM130Q8N3G9 435 aa7.22□□□□□ -1.25
CAPN3-218ENST00000568153 MIGA1Q8NAN2 632 aa7.22□□□□□ -1.25
CAPN3-218ENST00000568153 NCOA7Q8NI08 942 aa7.22□□□□□ -1.25
CAPN3-218ENST00000568153 TBC1D22AQ8WUA7 517 aa7.22□□□□□ -1.25
CAPN3-218ENST00000568153 NRSN2Q9GZP1 204 aa7.22□□□□□ -1.25
CAPN3-218ENST00000568153 MRPL18Q9H0U6 180 aaKnown RBP7.22□□□□□ -1.25
CAPN3-218ENST00000568153 NAPBQ9H115 298 aa7.22□□□□□ -1.25
CAPN3-218ENST00000568153 ZFYVE1Q9HBF4 777 aa7.22□□□□□ -1.25
CAPN3-218ENST00000568153 TPCN1Q9ULQ1 816 aa7.22□□□□□ -1.25
CAPN3-218ENST00000568153 TAF6LQ9Y6J9 622 aa7.22□□□□□ -1.25
CAPN3-218ENST00000568153 SRCAPQ6ZRS2 3230 aa7.22□□□□□ -1.25
CAPN3-218ENST00000568153 SALL1Q9NSC2 1324 aa7.22□□□□□ -1.25
CAPN3-218ENST00000568153 BCORQ6W2J9 1755 aa7.21□□□□□ -1.25
CAPN3-218ENST00000568153 LOC100996750A0A140TA64 210 aa7.21□□□□□ -1.26
CAPN3-218ENST00000568153 F8W735 103 aaPredicted RBP7.21□□□□□ -1.26
CAPN3-218ENST00000568153 FOXP2O15409 715 aa7.21□□□□□ -1.26
CAPN3-218ENST00000568153 PRKAB2O43741 272 aa7.21□□□□□ -1.26
CAPN3-218ENST00000568153 TDO2P48775 406 aa7.21□□□□□ -1.26
CAPN3-218ENST00000568153 HAND2P61296 217 aa7.21□□□□□ -1.26
CAPN3-218ENST00000568153 TOB2Q14106 344 aaPredicted RBP7.21□□□□□ -1.26
CAPN3-218ENST00000568153 RAB3GAP1Q15042 981 aa7.21□□□□□ -1.26
CAPN3-218ENST00000568153 ME3Q16798 604 aa7.21□□□□□ -1.26
CAPN3-218ENST00000568153 MFSD6Q6ZSS7 791 aa7.21□□□□□ -1.26
CAPN3-218ENST00000568153 STOX1Q6ZVD7 989 aa7.21□□□□□ -1.26
CAPN3-218ENST00000568153 RALYLQ86SE5 291 aaKnown RBP7.21□□□□□ -1.26
CAPN3-218ENST00000568153 DZIP1Q86YF9 867 aaKnown RBP7.21□□□□□ -1.26
CAPN3-218ENST00000568153 LCORLQ8N3X6 602 aa7.21□□□□□ -1.26
CAPN3-218ENST00000568153 FBXL16Q8N461 479 aa7.21□□□□□ -1.26
CAPN3-218ENST00000568153 UBASH3BQ8TF42 649 aa7.21□□□□□ -1.26
CAPN3-218ENST00000568153 GPR101Q96P66 508 aaPredicted RBP7.21□□□□□ -1.26
CAPN3-218ENST00000568153 TRIM56Q9BRZ2 755 aaKnown RBP7.21□□□□□ -1.26
CAPN3-218ENST00000568153 NOL10Q9BSC4 688 aaKnown RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms