RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.03□□□□□ -1.28
SHCBP1-206ENST00000567698 TCRBV5S4A2TA0A5A2 114 aa7.02□□□□□ -1.29
SHCBP1-206ENST00000567698 NTRK1P04629 796 aa7.02□□□□□ -1.29
SHCBP1-206ENST00000567698 POU3F2P20265 443 aaPredicted RBP7.02□□□□□ -1.29
SHCBP1-206ENST00000567698 MASP1P48740 699 aa7.02□□□□□ -1.29
SHCBP1-206ENST00000567698 PAK1Q13153 545 aa7.02□□□□□ -1.29
SHCBP1-206ENST00000567698 TARS2Q9BW92 718 aaKnown RBP7.02□□□□□ -1.29
SHCBP1-206ENST00000567698 MTFR1LQ9H019 292 aa7.02□□□□□ -1.29
SHCBP1-206ENST00000567698 KLHL14Q9P2G3 628 aa7.02□□□□□ -1.29
SHCBP1-206ENST00000567698 MAGEC2Q9UBF1 373 aaPredicted RBP7.02□□□□□ -1.29
SHCBP1-206ENST00000567698 CBLCQ9ULV8 474 aa7.02□□□□□ -1.29
SHCBP1-206ENST00000567698 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.02□□□□□ -1.29
SHCBP1-206ENST00000567698 HCFC2Q9Y5Z7 792 aa7.02□□□□□ -1.29
SHCBP1-206ENST00000567698 LOC100996750A0A140TA64 210 aa7.01□□□□□ -1.29
SHCBP1-206ENST00000567698 ASLP04424 464 aa7.01□□□□□ -1.29
SHCBP1-206ENST00000567698 VIL1P09327 827 aaKnown RBP7.01□□□□□ -1.29
SHCBP1-206ENST00000567698 JUNBP17275 347 aaPredicted RBP7.01□□□□□ -1.29
SHCBP1-206ENST00000567698 YBX1P67809 324 aaKnown RBP7.01□□□□□ -1.29
SHCBP1-206ENST00000567698 MROH9Q5TGP6 573 aa7.01□□□□□ -1.29
SHCBP1-206ENST00000567698 LRRTM3Q86VH5 581 aa7.01□□□□□ -1.29
SHCBP1-206ENST00000567698 SH3RF2Q8TEC5 729 aa7.01□□□□□ -1.29
SHCBP1-206ENST00000567698 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.01□□□□□ -1.29
SHCBP1-206ENST00000567698 FAM168AQ92567 244 aa7.01□□□□□ -1.29
SHCBP1-206ENST00000567698 TRMT2BQ96GJ1 504 aaKnown RBP7.01□□□□□ -1.29
SHCBP1-206ENST00000567698 LIN37Q96GY3 246 aaPredicted RBP7.01□□□□□ -1.29
SHCBP1-206ENST00000567698 KRTAP4-6Q9BYQ5 205 aa7.01□□□□□ -1.29
SHCBP1-206ENST00000567698 RXFP1Q9HBX9 757 aa7.01□□□□□ -1.29
SHCBP1-206ENST00000567698 PLA2G2DQ9UNK4 145 aa7.01□□□□□ -1.29
SHCBP1-206ENST00000567698 SIT1Q9Y3P8 196 aa7.01□□□□□ -1.29
SHCBP1-206ENST00000567698 FAM47E-STBD1D6RA91 191 aa7□□□□□ -1.29
SHCBP1-206ENST00000567698 AMY2AP04746 511 aa7□□□□□ -1.29
SHCBP1-206ENST00000567698 NAT1P18440 290 aa7□□□□□ -1.29
SHCBP1-206ENST00000567698 AMY2BP19961 511 aa7□□□□□ -1.29
SHCBP1-206ENST00000567698 IGFALSP35858 605 aa7□□□□□ -1.29
SHCBP1-206ENST00000567698 SLC6A11P48066 632 aa7□□□□□ -1.29
SHCBP1-206ENST00000567698 MECP2P51608 486 aaKnown RBP7□□□□□ -1.29
SHCBP1-206ENST00000567698 IRAK1P51617 712 aa7□□□□□ -1.29
SHCBP1-206ENST00000567698 KCNMB1Q16558 191 aa7□□□□□ -1.29
SHCBP1-206ENST00000567698 EMC4Q5J8M3 183 aa7□□□□□ -1.29
SHCBP1-206ENST00000567698 XP32Q5T750 250 aa7□□□□□ -1.29
SHCBP1-206ENST00000567698 BICRALQ6AI39 1079 aa7□□□□□ -1.29
SHCBP1-206ENST00000567698 ZCCHC8Q6NZY4 707 aaKnown RBP7□□□□□ -1.29
SHCBP1-206ENST00000567698 RPTNQ6XPR3 784 aa7□□□□□ -1.29
SHCBP1-206ENST00000567698 OTOP3Q7RTS5 596 aa7□□□□□ -1.29
SHCBP1-206ENST00000567698 OVCH1Q7RTY7 1134 aa7□□□□□ -1.29
SHCBP1-206ENST00000567698 IRF2BP1Q8IU81 584 aa7□□□□□ -1.29
SHCBP1-206ENST00000567698 NETO2Q8NC67 525 aa7□□□□□ -1.29
SHCBP1-206ENST00000567698 DDX1Q92499 740 aaKnown RBP7□□□□□ -1.29
SHCBP1-206ENST00000567698 CHAMP1Q96JM3 812 aa7□□□□□ -1.29
SHCBP1-206ENST00000567698 ALG1Q9BT22 464 aa7□□□□□ -1.29
SHCBP1-206ENST00000567698 CELF4Q9BZC1 486 aaKnown RBP7□□□□□ -1.29
SHCBP1-206ENST00000567698 SLC6A17Q9H1V8 727 aa7□□□□□ -1.29
SHCBP1-206ENST00000567698 EPB41L1Q9H4G0 881 aa7□□□□□ -1.29
SHCBP1-206ENST00000567698 COQ6Q9Y2Z9 468 aa7□□□□□ -1.29
SHCBP1-206ENST00000567698 A0A1W2PQ27 194 aa6.99□□□□□ -1.29
SHCBP1-206ENST00000567698 A0A1W2PQ64 194 aa6.99□□□□□ -1.29
SHCBP1-206ENST00000567698 A0A1W2PQC6 194 aa6.99□□□□□ -1.29
SHCBP1-206ENST00000567698 A0A1W2PQD8 194 aa6.99□□□□□ -1.29
SHCBP1-206ENST00000567698 BIN1O00499 593 aa6.99□□□□□ -1.29
SHCBP1-206ENST00000567698 NKRFO15226 690 aaKnown RBP eCLIP6.99□□□□□ -1.29
SHCBP1-206ENST00000567698 SGSM2O43147 1006 aa6.99□□□□□ -1.29
SHCBP1-206ENST00000567698 TADA3O75528 432 aa6.99□□□□□ -1.29
SHCBP1-206ENST00000567698 GLRX3O76003 335 aaKnown RBP6.99□□□□□ -1.29
SHCBP1-206ENST00000567698 CYBBP04839 570 aa6.99□□□□□ -1.29
SHCBP1-206ENST00000567698 SRGAP2CP0DJJ0 459 aa6.99□□□□□ -1.29
SHCBP1-206ENST00000567698 PYGMP11217 842 aa6.99□□□□□ -1.29
SHCBP1-206ENST00000567698 YBX3P16989 372 aaKnown RBP eCLIP6.99□□□□□ -1.29
SHCBP1-206ENST00000567698 TAL1P17542 331 aaPredicted RBP6.99□□□□□ -1.29
SHCBP1-206ENST00000567698 POU3F3P20264 500 aaPredicted RBP6.99□□□□□ -1.29
SHCBP1-206ENST00000567698 ADGRF1Q5T601 910 aa6.99□□□□□ -1.29
SHCBP1-206ENST00000567698 C16orf59Q7L2K0 433 aa6.99□□□□□ -1.29
SHCBP1-206ENST00000567698 RNF180Q86T96 592 aa6.99□□□□□ -1.29
SHCBP1-206ENST00000567698 ORAI3Q9BRQ5 295 aa6.99□□□□□ -1.29
SHCBP1-206ENST00000567698 ZC3H12DA2A288 527 aaKnown RBP6.98□□□□□ -1.29
SHCBP1-206ENST00000567698 ZNF561-AS1K7EIQ3 104 aa6.98□□□□□ -1.29
SHCBP1-206ENST00000567698 COL6A2P12110 1019 aa6.98□□□□□ -1.29
SHCBP1-206ENST00000567698 FBLN1P23142 703 aa6.98□□□□□ -1.29
SHCBP1-206ENST00000567698 ARL4AP40617 200 aa6.98□□□□□ -1.29
SHCBP1-206ENST00000567698 LACTBP83111 547 aaPredicted RBP6.98□□□□□ -1.29
SHCBP1-206ENST00000567698 PCBP1Q15365 356 aaKnown RBP eCLIP6.98□□□□□ -1.29
SHCBP1-206ENST00000567698 SEPT7Q16181 437 aaKnown RBP6.98□□□□□ -1.29
SHCBP1-206ENST00000567698 FSTL4Q6MZW2 842 aa6.98□□□□□ -1.29
SHCBP1-206ENST00000567698 PAQR3Q6TCH7 311 aa6.98□□□□□ -1.29
SHCBP1-206ENST00000567698 IGSF22Q8N9C0 903 aa6.98□□□□□ -1.29
SHCBP1-206ENST00000567698 PIP4K2CQ8TBX8 421 aa6.98□□□□□ -1.29
SHCBP1-206ENST00000567698 FBXW5Q969U6 566 aa6.98□□□□□ -1.29
SHCBP1-206ENST00000567698 KCNJ15Q99712 375 aa6.98□□□□□ -1.29
SHCBP1-206ENST00000567698 ZNF552Q9H707 407 aaPredicted RBP6.98□□□□□ -1.29
SHCBP1-206ENST00000567698 KCNK12Q9HB15 430 aa6.98□□□□□ -1.29
SHCBP1-206ENST00000567698 SMURF1Q9HCE7 757 aa6.98□□□□□ -1.29
SHCBP1-206ENST00000567698 TELO2Q9Y4R8 837 aa6.98□□□□□ -1.29
SHCBP1-206ENST00000567698 CCDC66A2RUB6 948 aa6.97□□□□□ -1.29
SHCBP1-206ENST00000567698 NUDT19A8MXV4 375 aa6.97□□□□□ -1.29
SHCBP1-206ENST00000567698 TRAF5O00463 557 aa6.97□□□□□ -1.29
SHCBP1-206ENST00000567698 OPA1O60313 960 aa6.97□□□□□ -1.29
SHCBP1-206ENST00000567698 PDE8AO60658 829 aa6.97□□□□□ -1.29
SHCBP1-206ENST00000567698 MYCLP1P12525 358 aaPredicted RBP6.97□□□□□ -1.29
SHCBP1-206ENST00000567698 RBM10P98175 930 aaKnown RBP6.97□□□□□ -1.29
SHCBP1-206ENST00000567698 PLEKHN1Q494U1 663 aaPredicted RBP6.97□□□□□ -1.29
SHCBP1-206ENST00000567698 CDCA2Q69YH5 1023 aaPredicted RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms