RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 A1CFQ9NQ94 594 aaKnown RBP11.61□□□□□ -0.55
CAPN3-216ENST00000567071 RCAN3Q9UKA8 241 aa11.61□□□□□ -0.55
CAPN3-216ENST00000567071 RALYQ9UKM9 306 aaKnown RBP11.61□□□□□ -0.55
CAPN3-216ENST00000567071 MAGEB6P1A0A0J9YX57 407 aa11.6□□□□□ -0.55
CAPN3-216ENST00000567071 MMP1P03956 469 aa11.6□□□□□ -0.55
CAPN3-216ENST00000567071 BMPR1AP36894 532 aa11.6□□□□□ -0.55
CAPN3-216ENST00000567071 G3BP1Q13283 466 aaKnown RBP eCLIP11.6□□□□□ -0.55
CAPN3-216ENST00000567071 PPP2R5BQ15173 497 aa11.6□□□□□ -0.55
CAPN3-216ENST00000567071 TKFCQ3LXA3 575 aa11.6□□□□□ -0.55
CAPN3-216ENST00000567071 TMEM63BQ5T3F8 832 aa11.6□□□□□ -0.55
CAPN3-216ENST00000567071 GDF6Q6KF10 455 aaPredicted RBP11.6□□□□□ -0.55
CAPN3-216ENST00000567071 ZC3H14Q6PJT7 736 aaKnown RBP11.6□□□□□ -0.55
CAPN3-216ENST00000567071 MRPL50Q8N5N7 158 aaKnown RBP11.6□□□□□ -0.55
CAPN3-216ENST00000567071 IL17RAQ96F46 866 aa11.6□□□□□ -0.55
CAPN3-216ENST00000567071 IFIH1Q9BYX4 1025 aaKnown RBP11.6□□□□□ -0.55
CAPN3-216ENST00000567071 RNF146Q9NTX7 359 aa11.6□□□□□ -0.55
CAPN3-216ENST00000567071 CLEC1BQ9P126 229 aa11.6□□□□□ -0.55
CAPN3-216ENST00000567071 FEM1BQ9UK73 627 aa11.6□□□□□ -0.55
CAPN3-216ENST00000567071 NR2E1Q9Y466 385 aa11.6□□□□□ -0.55
CAPN3-216ENST00000567071 FSD2A1L4K1 749 aa11.59□□□□□ -0.55
CAPN3-216ENST00000567071 SESTD1Q86VW0 696 aa11.59□□□□□ -0.55
CAPN3-216ENST00000567071 FLCNQ8NFG4 579 aa11.59□□□□□ -0.55
CAPN3-216ENST00000567071 DBF4BQ8NFT6 615 aa11.59□□□□□ -0.55
CAPN3-216ENST00000567071 DHX38Q92620 1227 aaKnown RBP11.59□□□□□ -0.55
CAPN3-216ENST00000567071 TOP1MTQ969P6 601 aa11.59□□□□□ -0.55
CAPN3-216ENST00000567071 DYNLL2Q96FJ2 89 aa11.59□□□□□ -0.55
CAPN3-216ENST00000567071 ADD3Q9UEY8 706 aaKnown RBP11.59□□□□□ -0.55
CAPN3-216ENST00000567071 BARX2Q9UMQ3 279 aaPredicted RBP11.59□□□□□ -0.55
CAPN3-216ENST00000567071 MYO10Q9HD67 2058 aa11.59□□□□□ -0.55
CAPN3-216ENST00000567071 A6NJR5 290 aa11.58□□□□□ -0.56
CAPN3-216ENST00000567071 F5H6K3 240 aa11.58□□□□□ -0.56
CAPN3-216ENST00000567071 SRGAP2BP0DMP2 458 aa11.58□□□□□ -0.56
CAPN3-216ENST00000567071 FXR2P51116 673 aaKnown RBP eCLIP11.58□□□□□ -0.56
CAPN3-216ENST00000567071 PDE4BQ07343 736 aa11.58□□□□□ -0.56
CAPN3-216ENST00000567071 KLRC3Q07444 240 aa11.58□□□□□ -0.56
CAPN3-216ENST00000567071 PTK7Q13308 1070 aa11.58□□□□□ -0.56
CAPN3-216ENST00000567071 CCDC105Q8IYK2 499 aa11.58□□□□□ -0.56
CAPN3-216ENST00000567071 C7orf31Q8N865 590 aa11.58□□□□□ -0.56
CAPN3-216ENST00000567071 SEPT8Q92599 483 aa11.58□□□□□ -0.56
CAPN3-216ENST00000567071 ZNF512BQ96KM6 892 aaPredicted RBP11.58□□□□□ -0.56
CAPN3-216ENST00000567071 MPHOSPH6Q99547 160 aaKnown RBP11.58□□□□□ -0.56
CAPN3-216ENST00000567071 RTP3Q9BQQ7 232 aa11.58□□□□□ -0.56
CAPN3-216ENST00000567071 CDV3Q9UKY7 258 aaKnown RBP11.58□□□□□ -0.56
CAPN3-216ENST00000567071 ISY1Q9ULR0 285 aaKnown RBP11.58□□□□□ -0.56
CAPN3-216ENST00000567071 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.58□□□□□ -0.56
CAPN3-216ENST00000567071 ZFYVE26Q68DK2 2539 aa11.57□□□□□ -0.56
CAPN3-216ENST00000567071 NDUFB10O96000 172 aa11.57□□□□□ -0.56
CAPN3-216ENST00000567071 CYP2D6P10635 497 aa11.57□□□□□ -0.56
CAPN3-216ENST00000567071 NRIP1P48552 1158 aa11.57□□□□□ -0.56
CAPN3-216ENST00000567071 CDK8P49336 464 aa11.57□□□□□ -0.56
CAPN3-216ENST00000567071 EVX2Q03828 476 aa11.57□□□□□ -0.56
CAPN3-216ENST00000567071 ZNF618Q5T7W0 954 aa11.57□□□□□ -0.56
CAPN3-216ENST00000567071 LRRC47Q8N1G4 583 aaKnown RBP11.57□□□□□ -0.56
CAPN3-216ENST00000567071 GPR161Q8N6U8 529 aaKnown RBP11.57□□□□□ -0.56
CAPN3-216ENST00000567071 DDRGK1Q96HY6 314 aa11.57□□□□□ -0.56
CAPN3-216ENST00000567071 TRERF1Q96PN7 1200 aa11.57□□□□□ -0.56
CAPN3-216ENST00000567071 RIOK1Q9BRS2 568 aaKnown RBP11.57□□□□□ -0.56
CAPN3-216ENST00000567071 PLVAPQ9BX97 442 aa11.57□□□□□ -0.56
CAPN3-216ENST00000567071 DCP1AQ9NPI6 582 aaPredicted RBP11.57□□□□□ -0.56
CAPN3-216ENST00000567071 SUPT16HQ9Y5B9 1047 aaKnown RBP11.57□□□□□ -0.56
CAPN3-216ENST00000567071 DDX49Q9Y6V7 483 aaKnown RBP11.57□□□□□ -0.56
CAPN3-216ENST00000567071 FLNBO75369 2602 aaKnown RBP11.57□□□□□ -0.56
CAPN3-216ENST00000567071 LOC102724159A0A0B4J2E5 919 aa11.56□□□□□ -0.56
CAPN3-216ENST00000567071 BRD1O95696 1058 aa11.56□□□□□ -0.56
CAPN3-216ENST00000567071 ADRB1P08588 477 aa11.56□□□□□ -0.56
CAPN3-216ENST00000567071 CT47B1P0C2W7 299 aaPredicted RBP11.56□□□□□ -0.56
CAPN3-216ENST00000567071 ALAS1P13196 640 aa11.56□□□□□ -0.56
CAPN3-216ENST00000567071 RARSP54136 660 aaKnown RBP11.56□□□□□ -0.56
CAPN3-216ENST00000567071 IKQ13123 557 aaPredicted RBP11.56□□□□□ -0.56
CAPN3-216ENST00000567071 PWP2Q15269 919 aaKnown RBP11.56□□□□□ -0.56
CAPN3-216ENST00000567071 RBM23Q86U06 439 aaKnown RBP11.56□□□□□ -0.56
CAPN3-216ENST00000567071 DTWD2Q8NBA8 298 aa11.56□□□□□ -0.56
CAPN3-216ENST00000567071 MORC4Q8TE76 937 aa11.56□□□□□ -0.56
CAPN3-216ENST00000567071 SCFD2Q8WU76 684 aa11.56□□□□□ -0.56
CAPN3-216ENST00000567071 SUSD6Q92537 303 aa11.56□□□□□ -0.56
CAPN3-216ENST00000567071 NEK1Q96PY6 1258 aa11.56□□□□□ -0.56
CAPN3-216ENST00000567071 DBNDD2Q9BQY9 259 aa11.56□□□□□ -0.56
CAPN3-216ENST00000567071 GPR108Q9NPR9 543 aa11.56□□□□□ -0.56
CAPN3-216ENST00000567071 TSHZ2Q9NRE2 1034 aa11.56□□□□□ -0.56
CAPN3-216ENST00000567071 SMC4Q9NTJ3 1288 aa11.56□□□□□ -0.56
CAPN3-216ENST00000567071 CYP39A1Q9NYL5 469 aa11.56□□□□□ -0.56
CAPN3-216ENST00000567071 GTF2IRD1Q9UHL9 959 aa11.56□□□□□ -0.56
CAPN3-216ENST00000567071 R4GN57 208 aa11.56□□□□□ -0.56
CAPN3-216ENST00000567071 RBM47A0AV96 593 aaKnown RBP11.55□□□□□ -0.56
CAPN3-216ENST00000567071 PRR5-ARHGAP8B1AHC4 643 aa11.55□□□□□ -0.56
CAPN3-216ENST00000567071 RSPH10B2B2RC85 870 aa11.55□□□□□ -0.56
CAPN3-216ENST00000567071 BCAR3O75815 825 aa11.55□□□□□ -0.56
CAPN3-216ENST00000567071 RSPH10BP0C881 870 aa11.55□□□□□ -0.56
CAPN3-216ENST00000567071 AOC1P19801 751 aa11.55□□□□□ -0.56
CAPN3-216ENST00000567071 SP100P23497 879 aaPredicted RBP11.55□□□□□ -0.56
CAPN3-216ENST00000567071 ATXN1P54253 815 aaKnown RBP11.55□□□□□ -0.56
CAPN3-216ENST00000567071 ARHGAP8P85298 464 aa11.55□□□□□ -0.56
CAPN3-216ENST00000567071 PLEKHG4Q58EX7 1191 aa11.55□□□□□ -0.56
CAPN3-216ENST00000567071 NSMFQ6X4W1 530 aa11.55□□□□□ -0.56
CAPN3-216ENST00000567071 SDR42E1Q8WUS8 393 aa11.55□□□□□ -0.56
CAPN3-216ENST00000567071 SSH1Q8WYL5 1049 aa11.55□□□□□ -0.56
CAPN3-216ENST00000567071 CTAGE1Q96RT6 745 aa11.55□□□□□ -0.56
CAPN3-216ENST00000567071 KATNAL1Q9BW62 490 aa11.55□□□□□ -0.56
CAPN3-216ENST00000567071 ADGRA3Q8IWK6 1321 aa11.55□□□□□ -0.56
CAPN3-216ENST00000567071 GLP2RO95838 553 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms