RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 FGFR1OPO95684 399 aaKnown RBP15.8■□□□□ 0.12
CDH1-209ENST00000566510 RASSF7Q02833 373 aa15.8■□□□□ 0.12
CDH1-209ENST00000566510 GFPT1Q06210 699 aaPredicted RBP15.8■□□□□ 0.12
CDH1-209ENST00000566510 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.8■□□□□ 0.12
CDH1-209ENST00000566510 UNC13DQ70J99 1090 aa15.8■□□□□ 0.12
CDH1-209ENST00000566510 FNBP4Q8N3X1 1017 aaPredicted RBP15.8■□□□□ 0.12
CDH1-209ENST00000566510 GLIS3Q8NEA6 775 aa15.8■□□□□ 0.12
CDH1-209ENST00000566510 DMGDHQ9UI17 866 aaKnown RBP15.8■□□□□ 0.12
CDH1-209ENST00000566510 SIK3Q9Y2K2 1263 aa15.8■□□□□ 0.12
CDH1-209ENST00000566510 TNNI2P48788 182 aa15.79■□□□□ 0.12
CDH1-209ENST00000566510 PPP4CP60510 307 aa15.79■□□□□ 0.12
CDH1-209ENST00000566510 KRT79Q5XKE5 535 aa15.79■□□□□ 0.12
CDH1-209ENST00000566510 SPATA4Q8NEY3 305 aa15.79■□□□□ 0.12
CDH1-209ENST00000566510 NEDD1Q8NHV4 660 aa15.79■□□□□ 0.12
CDH1-209ENST00000566510 DDX12PQ92771 950 aa15.79■□□□□ 0.12
CDH1-209ENST00000566510 GJA10Q969M2 543 aa15.79■□□□□ 0.12
CDH1-209ENST00000566510 OSBPL9Q96SU4 736 aa15.79■□□□□ 0.12
CDH1-209ENST00000566510 NUDT12Q9BQG2 462 aa15.79■□□□□ 0.12
CDH1-209ENST00000566510 RTFDC1Q9BY42 306 aaPredicted RBP15.79■□□□□ 0.12
CDH1-209ENST00000566510 PODXL2Q9NZ53 605 aa15.79■□□□□ 0.12
CDH1-209ENST00000566510 TBC1D7Q9P0N9 293 aa15.79■□□□□ 0.12
CDH1-209ENST00000566510 ROBO1Q9Y6N7 1651 aa15.79■□□□□ 0.12
CDH1-209ENST00000566510 COL5A3P25940 1745 aaPredicted RBP15.79■□□□□ 0.12
CDH1-209ENST00000566510 PRPF6O94906 941 aaKnown RBP15.79■□□□□ 0.12
CDH1-209ENST00000566510 C16orf86Q6ZW13 317 aa15.79■□□□□ 0.12
CDH1-209ENST00000566510 LRRC47Q8N1G4 583 aaKnown RBP15.79■□□□□ 0.12
CDH1-209ENST00000566510 PNMA5Q96PV4 448 aa15.79■□□□□ 0.12
CDH1-209ENST00000566510 RAB34Q9BZG1 259 aa15.79■□□□□ 0.12
CDH1-209ENST00000566510 NAV1Q8NEY1 1877 aa15.78■□□□□ 0.12
CDH1-209ENST00000566510 RPS6KA4O75676 772 aa15.78■□□□□ 0.12
CDH1-209ENST00000566510 NT5C2P49902 561 aa15.78■□□□□ 0.12
CDH1-209ENST00000566510 ENOX2Q16206 610 aaKnown RBP15.78■□□□□ 0.12
CDH1-209ENST00000566510 TSG101Q99816 390 aa15.78■□□□□ 0.12
CDH1-209ENST00000566510 GPCPD1Q9NPB8 672 aa15.78■□□□□ 0.12
CDH1-209ENST00000566510 FAM184BQ9ULE4 1060 aa15.78■□□□□ 0.12
CDH1-209ENST00000566510 LEMD3Q9Y2U8 911 aa15.78■□□□□ 0.12
CDH1-209ENST00000566510 RTCBQ9Y3I0 505 aaKnown RBP15.78■□□□□ 0.12
CDH1-209ENST00000566510 CNTNAP4Q9C0A0 1308 aa15.78■□□□□ 0.12
CDH1-209ENST00000566510 IRS2Q9Y4H2 1338 aa15.78■□□□□ 0.12
CDH1-209ENST00000566510 GOLGA6CA6NDK9 693 aa15.78■□□□□ 0.12
CDH1-209ENST00000566510 GOLGA6DP0CG33 693 aa15.78■□□□□ 0.12
CDH1-209ENST00000566510 ADCY7P51828 1080 aa15.78■□□□□ 0.12
CDH1-209ENST00000566510 AMIGO3Q86WK7 504 aa15.78■□□□□ 0.12
CDH1-209ENST00000566510 GOLGA6AQ9NYA3 693 aa15.78■□□□□ 0.12
CDH1-209ENST00000566510 STK17AQ9UEE5 414 aa15.78■□□□□ 0.12
CDH1-209ENST00000566510 PVALEFA0A1B0GWK0 134 aa15.77■□□□□ 0.12
CDH1-209ENST00000566510 TRAF5O00463 557 aa15.77■□□□□ 0.12
CDH1-209ENST00000566510 PAFAH1B1P43034 410 aa15.77■□□□□ 0.12
CDH1-209ENST00000566510 ARID5AQ03989 594 aa15.77■□□□□ 0.12
CDH1-209ENST00000566510 PICALMQ13492 652 aa15.77■□□□□ 0.12
CDH1-209ENST00000566510 CCDC40Q4G0X9 1142 aa15.77■□□□□ 0.12
CDH1-209ENST00000566510 KCNK18Q7Z418 384 aa15.77■□□□□ 0.12
CDH1-209ENST00000566510 GUF1Q8N442 669 aaKnown RBP15.77■□□□□ 0.12
CDH1-209ENST00000566510 FAM76AQ8TAV0 307 aa15.77■□□□□ 0.12
CDH1-209ENST00000566510 ARHGEF1Q92888 912 aaKnown RBP15.77■□□□□ 0.12
CDH1-209ENST00000566510 IQCDQ96DY2 449 aa15.77■□□□□ 0.12
CDH1-209ENST00000566510 MTMR9Q96QG7 549 aa15.77■□□□□ 0.12
CDH1-209ENST00000566510 SALL4Q9UJQ4 1053 aa15.77■□□□□ 0.12
CDH1-209ENST00000566510 HYOU1Q9Y4L1 999 aa15.77■□□□□ 0.12
CDH1-209ENST00000566510 AGPSO00116 658 aa15.77■□□□□ 0.11
CDH1-209ENST00000566510 HNRNPH3P31942 346 aaKnown RBP15.77■□□□□ 0.11
CDH1-209ENST00000566510 UBE2SQ16763 222 aa15.77■□□□□ 0.11
CDH1-209ENST00000566510 TMC4Q7Z404 712 aa15.77■□□□□ 0.11
CDH1-209ENST00000566510 CLEC10AQ8IUN9 316 aa15.77■□□□□ 0.11
CDH1-209ENST00000566510 RAD54LQ92698 747 aa15.77■□□□□ 0.11
CDH1-209ENST00000566510 RABEP2Q9H5N1 569 aa15.77■□□□□ 0.11
CDH1-209ENST00000566510 KANSL2Q9H9L4 492 aa15.77■□□□□ 0.11
CDH1-209ENST00000566510 ZC3H4Q9UPT8 1303 aaKnown RBP15.76■□□□□ 0.11
CDH1-209ENST00000566510 RPS6KA5O75582 802 aa15.76■□□□□ 0.11
CDH1-209ENST00000566510 UFL1O94874 794 aa15.76■□□□□ 0.11
CDH1-209ENST00000566510 TCP1P17987 556 aaKnown RBP15.76■□□□□ 0.11
CDH1-209ENST00000566510 SLC1A4P43007 532 aa15.76■□□□□ 0.11
CDH1-209ENST00000566510 LRRC63Q05C16 580 aa15.76■□□□□ 0.11
CDH1-209ENST00000566510 GRAPQ13588 217 aa15.76■□□□□ 0.11
CDH1-209ENST00000566510 FAM182BQ5T319 152 aa15.76■□□□□ 0.11
CDH1-209ENST00000566510 MMGT1Q8N4V1 131 aa15.76■□□□□ 0.11
CDH1-209ENST00000566510 GRAPLQ8TC17 118 aaPredicted RBP15.76■□□□□ 0.11
CDH1-209ENST00000566510 SNED1Q8TER0 1413 aa15.76■□□□□ 0.11
CDH1-209ENST00000566510 PDHBP11177 359 aa15.76■□□□□ 0.11
CDH1-209ENST00000566510 DNAJC21Q5F1R6 531 aaKnown RBP15.76■□□□□ 0.11
CDH1-209ENST00000566510 MFSD14BQ5SR56 506 aa15.76■□□□□ 0.11
CDH1-209ENST00000566510 MS4A14Q96JA4 679 aa15.76■□□□□ 0.11
CDH1-209ENST00000566510 RAD21O60216 631 aa15.75■□□□□ 0.11
CDH1-209ENST00000566510 RFC4P35249 363 aa15.75■□□□□ 0.11
CDH1-209ENST00000566510 FXR2P51116 673 aaKnown RBP eCLIP15.75■□□□□ 0.11
CDH1-209ENST00000566510 COBLL1Q53SF7 1204 aa15.75■□□□□ 0.11
CDH1-209ENST00000566510 NELFCDQ8IXH7 590 aa15.75■□□□□ 0.11
CDH1-209ENST00000566510 MYOCDQ8IZQ8 938 aa15.75■□□□□ 0.11
CDH1-209ENST00000566510 AENQ8WTP8 325 aaKnown RBP15.75■□□□□ 0.11
CDH1-209ENST00000566510 NOX5Q96PH1 765 aa15.75■□□□□ 0.11
CDH1-209ENST00000566510 RUFY1Q96T51 708 aa15.75■□□□□ 0.11
CDH1-209ENST00000566510 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.75■□□□□ 0.11
CDH1-209ENST00000566510 CD209Q9NNX6 404 aa15.75■□□□□ 0.11
CDH1-209ENST00000566510 C8orf74Q6P047 294 aa15.75■□□□□ 0.11
CDH1-209ENST00000566510 BAP1Q92560 729 aa15.75■□□□□ 0.11
CDH1-209ENST00000566510 MTMR8Q96EF0 704 aa15.75■□□□□ 0.11
CDH1-209ENST00000566510 ZHX3Q9H4I2 956 aa15.75■□□□□ 0.11
CDH1-209ENST00000566510 CCNL1Q9UK58 526 aaPredicted RBP15.75■□□□□ 0.11
CDH1-209ENST00000566510 RNASE9P60153 205 aaKnown RBP15.74■□□□□ 0.11
CDH1-209ENST00000566510 GPSM2P81274 684 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms