RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 TMEM109Q9BVC6 243 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 RANBP17Q9H2T7 1088 aaKnown RBP3.19□□□□□ -1.9
CHD9-218ENST00000566029 BABAM1Q9NWV8 329 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 INPP5FQ9Y2H2 1132 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 NEXMIFQ5QGS0 1516 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 E7EVH7 732 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 WBP4O75554 376 aaKnown RBP3.19□□□□□ -1.9
CHD9-218ENST00000566029 PLS1Q14651 629 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 PPP1R15BQ5SWA1 713 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 FOXB2Q5VYV0 432 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 SETDB2Q96T68 719 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 CCDC28BQ9BUN5 200 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 YIPF2Q9BWQ6 316 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 UBE2OQ9C0C9 1292 aaKnown RBP3.19□□□□□ -1.9
CHD9-218ENST00000566029 LRRC4CQ9HCJ2 640 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 MROH7Q68CQ1 1323 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 NPATQ14207 1427 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 DPPA5A6NC42 116 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 PABPN1LA6NDY0 278 aaKnown RBP3.19□□□□□ -1.9
CHD9-218ENST00000566029 PPP1R3GB7ZBB8 358 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 PPP6R2O75170 966 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 GYPCP04921 128 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 PABPC4Q13310 644 aaKnown RBP eCLIP3.19□□□□□ -1.9
CHD9-218ENST00000566029 LAMB3Q13751 1172 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 KRT31Q15323 416 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 UAP1Q16222 522 aaPredicted RBP3.19□□□□□ -1.9
CHD9-218ENST00000566029 LRRC34Q8IZ02 419 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 GLT8D2Q9H1C3 349 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 NCOA5Q9HCD5 579 aaKnown RBP3.19□□□□□ -1.9
CHD9-218ENST00000566029 ZNF219Q9P2Y4 722 aaPredicted RBP3.19□□□□□ -1.9
CHD9-218ENST00000566029 RCCD1A6NED2 376 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 SNAPC5O75971 98 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 MBD4O95243 580 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 NDUFA10O95299 355 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 CYP21A2P08686 494 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 EEF2P13639 858 aaKnown RBP3.19□□□□□ -1.9
CHD9-218ENST00000566029 FBLN1P23142 703 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 RPL13P26373 211 aaKnown RBP3.19□□□□□ -1.9
CHD9-218ENST00000566029 BNIP1Q12981 228 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 CCDC129Q6ZRS4 1044 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 ARHGAP18Q8N392 663 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 IRGQQ8WZA9 623 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 PBXIP1Q96AQ6 731 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 RNF25Q96BH1 459 aaPredicted RBP3.19□□□□□ -1.9
CHD9-218ENST00000566029 RBM12Q9NTZ6 932 aaKnown RBP3.19□□□□□ -1.9
CHD9-218ENST00000566029 EHD2Q9NZN4 543 aa3.19□□□□□ -1.9
CHD9-218ENST00000566029 POTEB3A0JP26 581 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 GMNCA6NCL1 334 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 OCRLQ01968 901 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 POTEBQ6S5H4 581 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 KSR1Q8IVT5 923 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 LRRC1Q9BTT6 524 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 MLXIPQ9HAP2 919 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 STIM2Q9P246 746 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 SATB2Q9UPW6 733 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 EPN1Q9Y6I3 576 aaPredicted RBP3.18□□□□□ -1.9
CHD9-218ENST00000566029 CAPN6Q9Y6Q1 641 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 hCG_2014768A0A024R1R8 64 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 NCK2O43639 380 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 HNRNPCP07910 306 aaKnown RBP eCLIP3.18□□□□□ -1.91e-6■■□□□ 14.2
CHD9-218ENST00000566029 TRIM14Q14142 442 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 ITIH4Q14624 930 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 PARP6Q2NL67 630 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 FKBP15Q5T1M5 1219 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 MB21D2Q8IYB1 491 aaPredicted RBP3.18□□□□□ -1.9
CHD9-218ENST00000566029 CCDC197Q8NCU1 140 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 TAOK3Q9H2K8 898 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 C6orf203Q9P0P8 240 aaPredicted RBP3.18□□□□□ -1.9
CHD9-218ENST00000566029 TMCO1Q9UM00 188 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 PALLDQ8WX93 1383 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 IGF2BP3O00425 579 aaKnown RBP eCLIP3.18□□□□□ -1.9
CHD9-218ENST00000566029 NAALADL2Q58DX5 795 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 ACBD5Q5T8D3 534 aaPredicted RBP3.18□□□□□ -1.9
CHD9-218ENST00000566029 RC3H1Q5TC82 1133 aaKnown RBP3.18□□□□□ -1.9
CHD9-218ENST00000566029 PIAS4Q8N2W9 510 aaPredicted RBP3.18□□□□□ -1.9
CHD9-218ENST00000566029 ZNF507Q8TCN5 953 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 ABHD10Q9NUJ1 306 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 SETD1AO15047 1707 aaKnown RBP3.18□□□□□ -1.9
CHD9-218ENST00000566029 A0A0G2JS52 829 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 FAM200BP0CF97 657 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 EIF4BP23588 611 aaKnown RBP3.18□□□□□ -1.9
CHD9-218ENST00000566029 KIAA0753Q2KHM9 967 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 KCTD16Q68DU8 428 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 SYCP3Q8IZU3 236 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 TEX9Q8N6V9 391 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 KCNV2Q8TDN2 545 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 SH3TC2Q8TF17 1288 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 SMARCAL1Q9NZC9 954 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 KCNH3Q9ULD8 1083 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 RPL26L1Q9UNX3 145 aaKnown RBP3.18□□□□□ -1.9
CHD9-218ENST00000566029 LRRC42Q9Y546 428 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 COMMD10Q9Y6G5 202 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 SYNDIG1LA6NDD5 238 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 SRGAP2O75044 1071 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 HEXIM1O94992 359 aaKnown RBP3.18□□□□□ -1.9
CHD9-218ENST00000566029 FOSP01100 380 aaPredicted RBP3.18□□□□□ -1.9
CHD9-218ENST00000566029 POLE2P56282 527 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 ARMC3Q5W041 872 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 GRAMD1CQ8IYS0 662 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 PHC3Q8NDX5 983 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms