RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 SREBF1P36956 1147 aa21.64■■□□□ 1.05
CSPG4P13-201ENST00000565545 TMEM132BQ14DG7 1078 aa21.64■■□□□ 1.05
CSPG4P13-201ENST00000565545 SNRNP48Q6IEG0 339 aaKnown RBP21.64■■□□□ 1.05
CSPG4P13-201ENST00000565545 CRYGNQ8WXF5 182 aa21.64■■□□□ 1.05
CSPG4P13-201ENST00000565545 TRERF1Q96PN7 1200 aa21.64■■□□□ 1.05
CSPG4P13-201ENST00000565545 ASCC2Q9H1I8 757 aaPredicted RBP21.64■■□□□ 1.05
CSPG4P13-201ENST00000565545 PNMA3Q9UL41 463 aa21.64■■□□□ 1.05
CSPG4P13-201ENST00000565545 ZSWIM8A7E2V4 1837 aa21.64■■□□□ 1.05
CSPG4P13-201ENST00000565545 CYP3A7-CYP3A51PA0A087WV96 503 aa21.63■■□□□ 1.05
CSPG4P13-201ENST00000565545 NEMFO60524 1076 aa21.63■■□□□ 1.05
CSPG4P13-201ENST00000565545 CYP3A4P08684 503 aa21.63■■□□□ 1.05
CSPG4P13-201ENST00000565545 TAL1P17542 331 aaPredicted RBP21.63■■□□□ 1.05
CSPG4P13-201ENST00000565545 CYP3A7P24462 503 aa21.63■■□□□ 1.05
CSPG4P13-201ENST00000565545 STAT3P40763 770 aa21.63■■□□□ 1.05
CSPG4P13-201ENST00000565545 FAM160A1Q05DH4 1040 aa21.63■■□□□ 1.05
CSPG4P13-201ENST00000565545 CCDC183Q5T5S1 534 aa21.63■■□□□ 1.05
CSPG4P13-201ENST00000565545 RESP18Q5W5W9 173 aa21.63■■□□□ 1.05
CSPG4P13-201ENST00000565545 SLAIN1Q8ND83 568 aa21.63■■□□□ 1.05
CSPG4P13-201ENST00000565545 P2RX7Q99572 595 aaKnown RBP21.63■■□□□ 1.05
CSPG4P13-201ENST00000565545 BRCA2P51587 3418 aa21.62■■□□□ 1.05
CSPG4P13-201ENST00000565545 LETM1O95202 739 aaPredicted RBP21.62■■□□□ 1.05
CSPG4P13-201ENST00000565545 LIG1P18858 919 aa21.62■■□□□ 1.05
CSPG4P13-201ENST00000565545 HOXA13P31271 388 aaPredicted RBP21.62■■□□□ 1.05
CSPG4P13-201ENST00000565545 HERVK_113P62684 666 aa21.62■■□□□ 1.05
CSPG4P13-201ENST00000565545 ARHGAP4P98171 946 aa21.62■■□□□ 1.05
CSPG4P13-201ENST00000565545 TPRNQ4KMQ1 711 aa21.62■■□□□ 1.05
CSPG4P13-201ENST00000565545 CHST13Q8NET6 341 aa21.62■■□□□ 1.05
CSPG4P13-201ENST00000565545 RNF146Q9NTX7 359 aa21.62■■□□□ 1.05
CSPG4P13-201ENST00000565545 FAM13BQ9NYF5 915 aa21.62■■□□□ 1.05
CSPG4P13-201ENST00000565545 GABRQQ9UN88 632 aa21.62■■□□□ 1.05
CSPG4P13-201ENST00000565545 NR2E3Q9Y5X4 410 aa21.62■■□□□ 1.05
CSPG4P13-201ENST00000565545 EDIL3O43854 480 aa21.61■■□□□ 1.05
CSPG4P13-201ENST00000565545 OR52Z1P0C646 297 aa21.61■■□□□ 1.05
CSPG4P13-201ENST00000565545 CIITAP33076 1130 aa21.61■■□□□ 1.05
CSPG4P13-201ENST00000565545 COPB2P35606 906 aa21.61■■□□□ 1.05
CSPG4P13-201ENST00000565545 SHC4Q6S5L8 630 aa21.61■■□□□ 1.05
CSPG4P13-201ENST00000565545 DTHD1Q6ZMT9 781 aa21.61■■□□□ 1.05
CSPG4P13-201ENST00000565545 RIOX2Q8IUF8 465 aa21.61■■□□□ 1.05
CSPG4P13-201ENST00000565545 ENGASEQ8NFI3 743 aa21.61■■□□□ 1.05
CSPG4P13-201ENST00000565545 SMCR8Q8TEV9 937 aaPredicted RBP21.61■■□□□ 1.05
CSPG4P13-201ENST00000565545 TBC1D5Q92609 795 aa21.61■■□□□ 1.05
CSPG4P13-201ENST00000565545 MBOAT7Q96N66 472 aa21.61■■□□□ 1.05
CSPG4P13-201ENST00000565545 CLIC6Q96NY7 704 aa21.61■■□□□ 1.05
CSPG4P13-201ENST00000565545 TMEM63CQ9P1W3 806 aa21.61■■□□□ 1.05
CSPG4P13-201ENST00000565545 FBXO40Q9UH90 709 aa21.61■■□□□ 1.05
CSPG4P13-201ENST00000565545 TRIOBPQ9H2D6 2365 aa21.61■■□□□ 1.05
CSPG4P13-201ENST00000565545 NFIBO00712 420 aa21.6■■□□□ 1.05
CSPG4P13-201ENST00000565545 ADCY3O60266 1144 aa21.6■■□□□ 1.05
CSPG4P13-201ENST00000565545 LONP1P36776 959 aaKnown RBP21.6■■□□□ 1.05
CSPG4P13-201ENST00000565545 MUM1L1Q5H9M0 696 aa21.6■■□□□ 1.05
CSPG4P13-201ENST00000565545 FCHSD1Q86WN1 690 aa21.6■■□□□ 1.05
CSPG4P13-201ENST00000565545 U2AF1L4Q8WU68 220 aaKnown RBP21.6■■□□□ 1.05
CSPG4P13-201ENST00000565545 UNC93B1Q9H1C4 597 aa21.6■■□□□ 1.05
CSPG4P13-201ENST00000565545 GOLPH3LQ9H4A5 285 aa21.6■■□□□ 1.05
CSPG4P13-201ENST00000565545 ACAD9Q9H845 621 aa21.6■■□□□ 1.05
CSPG4P13-201ENST00000565545 DACT1Q9NYF0 836 aa21.6■■□□□ 1.05
CSPG4P13-201ENST00000565545 HPSEQ9Y251 543 aa21.6■■□□□ 1.05
CSPG4P13-201ENST00000565545 A0A1B0GVL5 298 aa21.59■■□□□ 1.05
CSPG4P13-201ENST00000565545 TNPO2O14787 897 aaKnown RBP21.59■■□□□ 1.05
CSPG4P13-201ENST00000565545 FARP2O94887 1054 aaPredicted RBP21.59■■□□□ 1.05
CSPG4P13-201ENST00000565545 FLT3LGP49771 235 aa21.59■■□□□ 1.05
CSPG4P13-201ENST00000565545 SNW1Q13573 536 aaKnown RBP21.59■■□□□ 1.05
CSPG4P13-201ENST00000565545 PLS1Q14651 629 aa21.59■■□□□ 1.05
CSPG4P13-201ENST00000565545 CALCRLQ16602 461 aa21.59■■□□□ 1.05
CSPG4P13-201ENST00000565545 Q4G0T1 1027 aa21.59■■□□□ 1.05
CSPG4P13-201ENST00000565545 RNF207Q6ZRF8 634 aa21.59■■□□□ 1.05
CSPG4P13-201ENST00000565545 CSRNP2Q9H175 543 aa21.59■■□□□ 1.05
CSPG4P13-201ENST00000565545 TMEM60Q9H2L4 133 aa21.59■■□□□ 1.05
CSPG4P13-201ENST00000565545 HOMER2Q9NSB8 354 aa21.59■■□□□ 1.05
CSPG4P13-201ENST00000565545 DDX25Q9UHL0 483 aaKnown RBP21.59■■□□□ 1.05
CSPG4P13-201ENST00000565545 RIPK3Q9Y572 518 aa21.59■■□□□ 1.05
CSPG4P13-201ENST00000565545 MRVI1Q9Y6F6 885 aa21.59■■□□□ 1.05
CSPG4P13-201ENST00000565545 RPTORQ8N122 1335 aa21.58■■□□□ 1.05
CSPG4P13-201ENST00000565545 VWA3AA6NCI4 1184 aa21.58■■□□□ 1.05
CSPG4P13-201ENST00000565545 CTAGE5O15320 804 aa21.58■■□□□ 1.05
CSPG4P13-201ENST00000565545 KINO60870 393 aaKnown RBP21.58■■□□□ 1.05
CSPG4P13-201ENST00000565545 NR1I2O75469 434 aa21.58■■□□□ 1.05
CSPG4P13-201ENST00000565545 TDP2O95551 362 aa21.58■■□□□ 1.05
CSPG4P13-201ENST00000565545 SLC25A27O95847 323 aa21.58■■□□□ 1.05
CSPG4P13-201ENST00000565545 TFRCP02786 760 aaKnown RBP21.58■■□□□ 1.05
CSPG4P13-201ENST00000565545 ELNP15502 786 aa21.58■■□□□ 1.05
CSPG4P13-201ENST00000565545 PFKFB1P16118 471 aa21.58■■□□□ 1.05
CSPG4P13-201ENST00000565545 FMR1NBQ8N0W7 255 aaPredicted RBP21.58■■□□□ 1.05
CSPG4P13-201ENST00000565545 SYTL5Q8TDW5 730 aaPredicted RBP21.58■■□□□ 1.05
CSPG4P13-201ENST00000565545 AK8Q96MA6 479 aa21.58■■□□□ 1.05
CSPG4P13-201ENST00000565545 TIGD1Q96MW7 591 aa21.58■■□□□ 1.05
CSPG4P13-201ENST00000565545 MTMR9Q96QG7 549 aa21.58■■□□□ 1.05
CSPG4P13-201ENST00000565545 PYM1Q9BRP8 204 aaKnown RBP21.58■■□□□ 1.05
CSPG4P13-201ENST00000565545 SPATC1LQ9H0A9 340 aa21.58■■□□□ 1.05
CSPG4P13-201ENST00000565545 GZF1Q9H116 711 aaPredicted RBP21.58■■□□□ 1.05
CSPG4P13-201ENST00000565545 NUP62CLQ9H1M0 184 aa21.58■■□□□ 1.05
CSPG4P13-201ENST00000565545 BTBD7Q9P203 1132 aa21.58■■□□□ 1.05
CSPG4P13-201ENST00000565545 TBX3O15119 743 aa21.57■■□□□ 1.04
CSPG4P13-201ENST00000565545 SGPL1O95470 568 aa21.57■■□□□ 1.04
CSPG4P13-201ENST00000565545 SYKP43405 635 aa21.57■■□□□ 1.04
CSPG4P13-201ENST00000565545 NDUFA8P51970 172 aa21.57■■□□□ 1.04
CSPG4P13-201ENST00000565545 RPS6P62753 249 aaKnown RBP21.57■■□□□ 1.04
CSPG4P13-201ENST00000565545 ZSCAN23Q3MJ62 389 aa21.57■■□□□ 1.04
CSPG4P13-201ENST00000565545 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.57■■□□□ 1.04
CSPG4P13-201ENST00000565545 UBE2Q1Q7Z7E8 422 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms