RNA–Protein interactions for RNA: ENST00000565481.5

KIFC3-222, Transcript of kinesin family member C3, human

TSL 5

Gene KIFC3, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KIFC3-222	ENST00000565481	VWCE	Q96DN2	955 aa		13.51	□□□□□ -0.25
KIFC3-222	ENST00000565481	SPZ1	Q9BXG8	430 aa		13.51	□□□□□ -0.25
KIFC3-222	ENST00000565481	SEMA6B	Q9H3T3	888 aa		13.51	□□□□□ -0.25
KIFC3-222	ENST00000565481	GPHN	Q9NQX3	736 aa	Predicted RBP	13.51	□□□□□ -0.25
KIFC3-222	ENST00000565481	TRMT13	Q9NUP7	481 aa	Known RBP	13.51	□□□□□ -0.25
KIFC3-222	ENST00000565481	DDX41	Q9UJV9	622 aa	Known RBP	13.51	□□□□□ -0.25
KIFC3-222	ENST00000565481	SH2B2	O14492	632 aa	Predicted RBP	13.5	□□□□□ -0.25
KIFC3-222	ENST00000565481	PRC1	O43663	620 aa		13.5	□□□□□ -0.25
KIFC3-222	ENST00000565481	MMP3	P08254	477 aa		13.5	□□□□□ -0.25
KIFC3-222	ENST00000565481	SUPT20HL2	P0C7V6	817 aa		13.5	□□□□□ -0.25
KIFC3-222	ENST00000565481	HOXD8	P13378	290 aa	Predicted RBP	13.5	□□□□□ -0.25
KIFC3-222	ENST00000565481	MCM5	P33992	734 aa		13.5	□□□□□ -0.25
KIFC3-222	ENST00000565481	LY6K	Q17RY6	165 aa		13.5	□□□□□ -0.25
KIFC3-222	ENST00000565481	CREB3L3	Q68CJ9	461 aa		13.5	□□□□□ -0.25
KIFC3-222	ENST00000565481	ZNF365	Q70YC5	407 aa		13.5	□□□□□ -0.25
KIFC3-222	ENST00000565481	VSIG10L	Q86VR7	867 aa		13.5	□□□□□ -0.25
KIFC3-222	ENST00000565481	HOMER1	Q86YM7	354 aa		13.5	□□□□□ -0.25
KIFC3-222	ENST00000565481	AFG1L	Q8WV93	481 aa		13.5	□□□□□ -0.25
KIFC3-222	ENST00000565481	HERVK_113	Q902F9	699 aa		13.5	□□□□□ -0.25
KIFC3-222	ENST00000565481	TMEM87B	Q96K49	555 aa		13.5	□□□□□ -0.25
KIFC3-222	ENST00000565481	FAM161B	Q96MY7	647 aa		13.5	□□□□□ -0.25
KIFC3-222	ENST00000565481	PTPRS	Q13332	1948 aa		13.5	□□□□□ -0.25
KIFC3-222	ENST00000565481	GCOM1	H8Y6P7	765 aa	Predicted RBP	13.49	□□□□□ -0.25
KIFC3-222	ENST00000565481	POLR2M	P0CAP2	368 aa		13.49	□□□□□ -0.25
KIFC3-222	ENST00000565481	ACR	P10323	421 aa		13.49	□□□□□ -0.25
KIFC3-222	ENST00000565481	HOXA13	P31271	388 aa	Predicted RBP	13.49	□□□□□ -0.25
KIFC3-222	ENST00000565481	LIFR	P42702	1097 aa		13.49	□□□□□ -0.25
KIFC3-222	ENST00000565481	PGM5	Q15124	567 aa		13.49	□□□□□ -0.25
KIFC3-222	ENST00000565481	CASC1	Q6TDU7	716 aa		13.49	□□□□□ -0.25
KIFC3-222	ENST00000565481	SESTD1	Q86VW0	696 aa		13.49	□□□□□ -0.25
KIFC3-222	ENST00000565481	SKAP1	Q86WV1	359 aa		13.49	□□□□□ -0.25
KIFC3-222	ENST00000565481	TMTC2	Q8N394	836 aa		13.49	□□□□□ -0.25
KIFC3-222	ENST00000565481	IL31RA	Q8NI17	732 aa		13.49	□□□□□ -0.25
KIFC3-222	ENST00000565481	KAT2B	Q92831	832 aa		13.49	□□□□□ -0.25
KIFC3-222	ENST00000565481	CTAGE1	Q96RT6	745 aa		13.49	□□□□□ -0.25
KIFC3-222	ENST00000565481	CDX2	Q99626	313 aa	Predicted RBP	13.49	□□□□□ -0.25
KIFC3-222	ENST00000565481	VCAN	P13611	3396 aa		13.48	□□□□□ -0.25
KIFC3-222	ENST00000565481	KAT6A	Q92794	2004 aa		13.48	□□□□□ -0.25
KIFC3-222	ENST00000565481	PITPNM1	O00562	1244 aa		13.48	□□□□□ -0.25
KIFC3-222	ENST00000565481	CYP2C9	P11712	490 aa		13.48	□□□□□ -0.25
KIFC3-222	ENST00000565481	DNAJB2	P25686	324 aa		13.48	□□□□□ -0.25
KIFC3-222	ENST00000565481	KIF5B	P33176	963 aa		13.48	□□□□□ -0.25
KIFC3-222	ENST00000565481	CCL23	P55773	120 aa		13.48	□□□□□ -0.25
KIFC3-222	ENST00000565481	KCNV1	Q6PIU1	500 aa		13.48	□□□□□ -0.25
KIFC3-222	ENST00000565481	SLC17A8	Q8NDX2	589 aa		13.48	□□□□□ -0.25
KIFC3-222	ENST00000565481	PPTC7	Q8NI37	304 aa		13.48	□□□□□ -0.25
KIFC3-222	ENST00000565481	CTCFL	Q8NI51	663 aa	Predicted RBP	13.48	□□□□□ -0.25
KIFC3-222	ENST00000565481	LZTS2	Q9BRK4	669 aa		13.48	□□□□□ -0.25
KIFC3-222	ENST00000565481	MYL10	Q9BUA6	226 aa		13.48	□□□□□ -0.25
KIFC3-222	ENST00000565481	ANO2	Q9NQ90	1003 aa		13.48	□□□□□ -0.25
KIFC3-222	ENST00000565481	CXXC1	Q9P0U4	656 aa	Predicted RBP	13.48	□□□□□ -0.25
KIFC3-222	ENST00000565481	MRVI1	Q9Y6F6	885 aa		13.48	□□□□□ -0.25
KIFC3-222	ENST00000565481	TTC28	Q96AY4	2481 aa		13.48	□□□□□ -0.25
KIFC3-222	ENST00000565481	FGB	P02675	491 aa		13.47	□□□□□ -0.25
KIFC3-222	ENST00000565481	TGFB3	P10600	412 aa		13.47	□□□□□ -0.25
KIFC3-222	ENST00000565481	CAST	P20810	708 aa	Known RBP	13.47	□□□□□ -0.25
KIFC3-222	ENST00000565481	CCND2	P30279	289 aa		13.47	□□□□□ -0.25
KIFC3-222	ENST00000565481	LAMC2	Q13753	1193 aa		13.47	□□□□□ -0.25
KIFC3-222	ENST00000565481	DGKD	Q16760	1214 aa		13.47	□□□□□ -0.25
KIFC3-222	ENST00000565481	MYSM1	Q5VVJ2	828 aa		13.47	□□□□□ -0.25
KIFC3-222	ENST00000565481	SGMS1	Q86VZ5	419 aa		13.47	□□□□□ -0.25
KIFC3-222	ENST00000565481	RPUSD2	Q8IZ73	545 aa	Known RBP	13.47	□□□□□ -0.25
KIFC3-222	ENST00000565481	SCLY	Q96I15	445 aa		13.47	□□□□□ -0.25
KIFC3-222	ENST00000565481	SPTBN5	Q9NRC6	3674 aa	Known RBP	13.46	□□□□□ -0.25
KIFC3-222	ENST00000565481	GRXCR1	A8MXD5	290 aa		13.46	□□□□□ -0.25
KIFC3-222	ENST00000565481	HAS3	O00219	553 aa		13.46	□□□□□ -0.25
KIFC3-222	ENST00000565481	PIK3CD	O00329	1044 aa		13.46	□□□□□ -0.25
KIFC3-222	ENST00000565481	PLEKHA8P1	O95397	391 aa		13.46	□□□□□ -0.25
KIFC3-222	ENST00000565481	F2	P00734	622 aa		13.46	□□□□□ -0.25
KIFC3-222	ENST00000565481	PFKM	P08237	780 aa		13.46	□□□□□ -0.25
KIFC3-222	ENST00000565481	CALM1	P0DP23	149 aa		13.46	□□□□□ -0.25
KIFC3-222	ENST00000565481	CALM2	P0DP24	149 aa		13.46	□□□□□ -0.25
KIFC3-222	ENST00000565481	CALM3	P0DP25	149 aa		13.46	□□□□□ -0.25
KIFC3-222	ENST00000565481	MYCL	P12524	364 aa	Predicted RBP	13.46	□□□□□ -0.25
KIFC3-222	ENST00000565481	GNAQ	P50148	359 aa		13.46	□□□□□ -0.25
KIFC3-222	ENST00000565481	TSGA10IP	Q3SY00	556 aa		13.46	□□□□□ -0.25
KIFC3-222	ENST00000565481	FAM47C	Q5HY64	1035 aa		13.46	□□□□□ -0.25
KIFC3-222	ENST00000565481	SRBD1	Q8N5C6	995 aa	Known RBP	13.46	□□□□□ -0.25
KIFC3-222	ENST00000565481	PPP1R13L	Q8WUF5	828 aa		13.46	□□□□□ -0.25
KIFC3-222	ENST00000565481	RRP36	Q96EU6	259 aa	Known RBP	13.46	□□□□□ -0.25
KIFC3-222	ENST00000565481	PBX4	Q9BYU1	374 aa		13.46	□□□□□ -0.25
KIFC3-222	ENST00000565481	MTIF3	Q9H2K0	278 aa	Known RBP	13.46	□□□□□ -0.25
KIFC3-222	ENST00000565481	CCDC69	A6NI79	296 aa		13.45	□□□□□ -0.26
KIFC3-222	ENST00000565481	PPFIA4	O75335	1185 aa		13.45	□□□□□ -0.26
KIFC3-222	ENST00000565481	STAM2	O75886	525 aa		13.45	□□□□□ -0.26
KIFC3-222	ENST00000565481	UBA1	P22314	1058 aa	Known RBP	13.45	□□□□□ -0.26
KIFC3-222	ENST00000565481	ICAM3	P32942	547 aa		13.45	□□□□□ -0.26
KIFC3-222	ENST00000565481	RFC2	P35250	354 aa		13.45	□□□□□ -0.26
KIFC3-222	ENST00000565481	PBX2	P40425	430 aa		13.45	□□□□□ -0.26
KIFC3-222	ENST00000565481	MRPS9	P82933	396 aa	Known RBP	13.45	□□□□□ -0.26
KIFC3-222	ENST00000565481	SP2	Q02086	613 aa		13.45	□□□□□ -0.26
KIFC3-222	ENST00000565481	RBL2	Q08999	1139 aa		13.45	□□□□□ -0.26
KIFC3-222	ENST00000565481	CELF3	Q5SZQ8	465 aa	Known RBP	13.45	□□□□□ -0.26
KIFC3-222	ENST00000565481	RNF20	Q5VTR2	975 aa		13.45	□□□□□ -0.26
KIFC3-222	ENST00000565481	GDF6	Q6KF10	455 aa	Predicted RBP	13.45	□□□□□ -0.26
KIFC3-222	ENST00000565481	NFXL1	Q6ZNB6	911 aa		13.45	□□□□□ -0.26
KIFC3-222	ENST00000565481	FCHSD1	Q86WN1	690 aa		13.45	□□□□□ -0.26
KIFC3-222	ENST00000565481	DHX37	Q8IY37	1157 aa	Known RBP	13.45	□□□□□ -0.26
KIFC3-222	ENST00000565481	MYLIP	Q8WY64	445 aa		13.45	□□□□□ -0.26
KIFC3-222	ENST00000565481	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	13.45	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 14 ms