RNA–Protein interactions for RNA: ENST00000564890.1

PKD1-229, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 574 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-229ENST00000564890 ARIH2O95376 493 aa21.37■■□□□ 1.01
PKD1-229ENST00000564890 ADCY7P51828 1080 aa21.37■■□□□ 1.01
PKD1-229ENST00000564890 PKN1Q16512 942 aa21.37■■□□□ 1.01
PKD1-229ENST00000564890 FSCN1Q16658 493 aaKnown RBP21.37■■□□□ 1.01
PKD1-229ENST00000564890 PRPF38BQ5VTL8 546 aaKnown RBP21.37■■□□□ 1.01
PKD1-229ENST00000564890 SLC39A5Q6ZMH5 540 aa21.37■■□□□ 1.01
PKD1-229ENST00000564890 C7orf61Q8IZ16 206 aa21.37■■□□□ 1.01
PKD1-229ENST00000564890 OR6J1Q8NGC5 347 aa21.37■■□□□ 1.01
PKD1-229ENST00000564890 COPS5Q92905 334 aa21.37■■□□□ 1.01
PKD1-229ENST00000564890 ZFP91Q96JP5 570 aaPredicted RBP21.37■■□□□ 1.01
PKD1-229ENST00000564890 C22orf23Q9BZE7 217 aa21.37■■□□□ 1.01
PKD1-229ENST00000564890 SLKQ9H2G2 1235 aaPredicted RBP21.37■■□□□ 1.01
PKD1-229ENST00000564890 RIC8AQ9NPQ8 531 aa21.37■■□□□ 1.01
PKD1-229ENST00000564890 NR2E3Q9Y5X4 410 aa21.37■■□□□ 1.01
PKD1-229ENST00000564890 SMCO2A6NFE2 343 aa21.36■■□□□ 1.01
PKD1-229ENST00000564890 ASGR1P07306 291 aa21.36■■□□□ 1.01
PKD1-229ENST00000564890 SSRP1Q08945 709 aaKnown RBP21.36■■□□□ 1.01
PKD1-229ENST00000564890 CCDC62Q6P9F0 684 aa21.36■■□□□ 1.01
PKD1-229ENST00000564890 CPLX2Q6PUV4 134 aaKnown RBP21.36■■□□□ 1.01
PKD1-229ENST00000564890 TRIM22Q8IYM9 498 aa21.36■■□□□ 1.01
PKD1-229ENST00000564890 KIAA1217Q5T5P2 1943 aa21.35■■□□□ 1.01
PKD1-229ENST00000564890 SPDYE3A6NKU9 549 aa21.35■■□□□ 1.01
PKD1-229ENST00000564890 H0YGN5 161 aa21.35■■□□□ 1.01
PKD1-229ENST00000564890 ZEB2O60315 1214 aa21.35■■□□□ 1.01
PKD1-229ENST00000564890 RGS20O76081 388 aa21.35■■□□□ 1.01
PKD1-229ENST00000564890 RTP1P59025 263 aa21.35■■□□□ 1.01
PKD1-229ENST00000564890 SCRN1Q12765 414 aa21.35■■□□□ 1.01
PKD1-229ENST00000564890 LY6KQ17RY6 165 aa21.35■■□□□ 1.01
PKD1-229ENST00000564890 MRVI1Q9Y6F6 885 aa21.35■■□□□ 1.01
PKD1-229ENST00000564890 PFKFB2O60825 505 aa21.34■■□□□ 1.01
PKD1-229ENST00000564890 MRPS9P82933 396 aaKnown RBP21.34■■□□□ 1.01
PKD1-229ENST00000564890 PCNX4Q63HM2 1172 aa21.34■■□□□ 1.01
PKD1-229ENST00000564890 TEX2Q8IWB9 1127 aa21.34■■□□□ 1.01
PKD1-229ENST00000564890 CCDC12Q8WUD4 166 aaPredicted RBP21.34■■□□□ 1.01
PKD1-229ENST00000564890 GLT1D1Q96MS3 346 aa21.34■■□□□ 1.01
PKD1-229ENST00000564890 GLT8D2Q9H1C3 349 aa21.34■■□□□ 1.01
PKD1-229ENST00000564890 STARD7Q9NQZ5 370 aa21.34■■□□□ 1.01
PKD1-229ENST00000564890 PCDHA6Q9UN73 950 aa21.34■■□□□ 1.01
PKD1-229ENST00000564890 PCDHA8Q9Y5H6 950 aa21.34■■□□□ 1.01
PKD1-229ENST00000564890 STAM2O75886 525 aa21.33■■□□□ 1.01
PKD1-229ENST00000564890 GH1P01241 217 aa21.33■■□□□ 1.01
PKD1-229ENST00000564890 RBM25P49756 843 aaKnown RBP21.33■■□□□ 1.01
PKD1-229ENST00000564890 CPT1AP50416 773 aa21.33■■□□□ 1.01
PKD1-229ENST00000564890 SNX17Q15036 470 aa21.33■■□□□ 1.01
PKD1-229ENST00000564890 XRRA1Q6P2D8 792 aa21.33■■□□□ 1.01
PKD1-229ENST00000564890 VTI1AQ96AJ9 217 aa21.33■■□□□ 1.01
PKD1-229ENST00000564890 KIF2CQ99661 725 aa21.33■■□□□ 1.01
PKD1-229ENST00000564890 EHMT1Q9H9B1 1298 aa21.33■■□□□ 1.01
PKD1-229ENST00000564890 UPF2Q9HAU5 1272 aaKnown RBP21.33■■□□□ 1.01
PKD1-229ENST00000564890 RTEL1Q9NZ71 1219 aa21.33■■□□□ 1.01
PKD1-229ENST00000564890 DDX41Q9UJV9 622 aaKnown RBP21.33■■□□□ 1.01
PKD1-229ENST00000564890 ATP11BQ9Y2G3 1177 aa21.33■■□□□ 1.01
PKD1-229ENST00000564890 ESYT2A0FGR8 921 aa21.32■■□□□ 1
PKD1-229ENST00000564890 CDKL5O76039 1030 aa21.32■■□□□ 1
PKD1-229ENST00000564890 LARGE1O95461 756 aa21.32■■□□□ 1
PKD1-229ENST00000564890 TRIM60Q495X7 471 aa21.32■■□□□ 1
PKD1-229ENST00000564890 C1orf53Q5VUE5 145 aa21.32■■□□□ 1
PKD1-229ENST00000564890 KCNV1Q6PIU1 500 aa21.32■■□□□ 1
PKD1-229ENST00000564890 CXCL17Q6UXB2 119 aa21.32■■□□□ 1
PKD1-229ENST00000564890 INPP4AQ96PE3 977 aaPredicted RBP21.32■■□□□ 1
PKD1-229ENST00000564890 ZMYND12Q9H0C1 365 aa21.32■■□□□ 1
PKD1-229ENST00000564890 ELP1O95163 1332 aa21.31■■□□□ 1
PKD1-229ENST00000564890 DEXIO95424 95 aa21.31■■□□□ 1
PKD1-229ENST00000564890 FOSP01100 380 aaPredicted RBP21.31■■□□□ 1
PKD1-229ENST00000564890 ARHGAP1Q07960 439 aa21.31■■□□□ 1
PKD1-229ENST00000564890 ME3Q16798 604 aa21.31■■□□□ 1
PKD1-229ENST00000564890 GNPTABQ3T906 1256 aa21.31■■□□□ 1
PKD1-229ENST00000564890 BRDTQ58F21 947 aaPredicted RBP21.31■■□□□ 1
PKD1-229ENST00000564890 NECAB1Q8N987 351 aa21.31■■□□□ 1
PKD1-229ENST00000564890 CCDC148Q8NFR7 591 aa21.31■■□□□ 1
PKD1-229ENST00000564890 PGBD1Q96JS3 809 aa21.31■■□□□ 1
PKD1-229ENST00000564890 C6orf50Q9HD87 102 aa21.31■■□□□ 1
PKD1-229ENST00000564890 TMEM260Q9NX78 707 aa21.31■■□□□ 1
PKD1-229ENST00000564890 VPS54Q9P1Q0 977 aa21.31■■□□□ 1
PKD1-229ENST00000564890 ZMYND8Q9ULU4 1186 aaPredicted RBP21.31■■□□□ 1
PKD1-229ENST00000564890 A6NJR5 290 aa21.3■■□□□ 1
PKD1-229ENST00000564890 CABYRO75952 493 aa21.3■■□□□ 1
PKD1-229ENST00000564890 MYL3P08590 195 aa21.3■■□□□ 1
PKD1-229ENST00000564890 CLK2P49760 499 aaKnown RBP21.3■■□□□ 1
PKD1-229ENST00000564890 AP3B2Q13367 1082 aa21.3■■□□□ 1
PKD1-229ENST00000564890 AFG1LQ8WV93 481 aa21.3■■□□□ 1
PKD1-229ENST00000564890 ANO3Q9BYT9 981 aa21.3■■□□□ 1
PKD1-229ENST00000564890 SH3GLB2Q9NR46 395 aa21.3■■□□□ 1
PKD1-229ENST00000564890 POLR3EQ9NVU0 708 aa21.3■■□□□ 1
PKD1-229ENST00000564890 CEP290O15078 2479 aa21.3■■□□□ 1
PKD1-229ENST00000564890 A0A0U1RQG5 324 aaPredicted RBP21.29■■□□□ 1
PKD1-229ENST00000564890 SORBS3O60504 671 aa21.29■■□□□ 1
PKD1-229ENST00000564890 TGFB3P10600 412 aa21.29■■□□□ 1
PKD1-229ENST00000564890 SYN1P17600 705 aa21.29■■□□□ 1
PKD1-229ENST00000564890 UBA1P22314 1058 aaKnown RBP21.29■■□□□ 1
PKD1-229ENST00000564890 GNA11P29992 359 aa21.29■■□□□ 1
PKD1-229ENST00000564890 ICAM3P32942 547 aa21.29■■□□□ 1
PKD1-229ENST00000564890 JAKMIP3Q5VZ66 844 aa21.29■■□□□ 1
PKD1-229ENST00000564890 NLRX1Q86UT6 975 aa21.29■■□□□ 1
PKD1-229ENST00000564890 DHX37Q8IY37 1157 aaKnown RBP21.29■■□□□ 1
PKD1-229ENST00000564890 GTF3C6Q969F1 213 aa21.29■■□□□ 1
PKD1-229ENST00000564890 SPATA31C2B4DYI2 1134 aa21.28■■□□□ 1
PKD1-229ENST00000564890 ADAMTS3O15072 1205 aa21.28■■□□□ 1
PKD1-229ENST00000564890 FIBPO43427 364 aa21.28■■□□□ 1
PKD1-229ENST00000564890 DTNBO60941 627 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms