RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 LMAN1P49257 510 aa8.46□□□□□ -1.06
ATXN3-249ENST00000564606 EPHB4P54760 987 aa8.46□□□□□ -1.06
ATXN3-249ENST00000564606 ERVK-24P63145 666 aa8.46□□□□□ -1.06
ATXN3-249ENST00000564606 AMPD2Q01433 879 aa8.46□□□□□ -1.06
ATXN3-249ENST00000564606 CFAP221Q4G0U5 840 aa8.46□□□□□ -1.06
ATXN3-249ENST00000564606 TRAPPC3LQ5T215 181 aa8.46□□□□□ -1.06
ATXN3-249ENST00000564606 RCSD1Q6JBY9 416 aa8.46□□□□□ -1.06
ATXN3-249ENST00000564606 MOXD1Q6UVY6 613 aa8.46□□□□□ -1.06
ATXN3-249ENST00000564606 STXBP4Q6ZWJ1 553 aa8.46□□□□□ -1.06
ATXN3-249ENST00000564606 ZNF572Q7Z3I7 529 aaPredicted RBP8.46□□□□□ -1.06
ATXN3-249ENST00000564606 IFT20Q8IY31 132 aa8.46□□□□□ -1.06
ATXN3-249ENST00000564606 TEX11Q8IYF3 940 aa8.46□□□□□ -1.06
ATXN3-249ENST00000564606 MARCH10Q8NA82 808 aaPredicted RBP8.46□□□□□ -1.06
ATXN3-249ENST00000564606 TAF4BQ92750 862 aa8.46□□□□□ -1.06
ATXN3-249ENST00000564606 CELF1Q92879 486 aaKnown RBP8.46□□□□□ -1.06
ATXN3-249ENST00000564606 CUL5Q93034 780 aa8.46□□□□□ -1.06
ATXN3-249ENST00000564606 ACSBG1Q96GR2 724 aa8.46□□□□□ -1.06
ATXN3-249ENST00000564606 TMEM47Q9BQJ4 181 aa8.46□□□□□ -1.06
ATXN3-249ENST00000564606 SELENOOQ9BVL4 669 aa8.46□□□□□ -1.06
ATXN3-249ENST00000564606 NDST4Q9H3R1 872 aa8.46□□□□□ -1.06
ATXN3-249ENST00000564606 ANKZF1Q9H8Y5 726 aa8.46□□□□□ -1.06
ATXN3-249ENST00000564606 GGA1Q9UJY5 639 aa8.46□□□□□ -1.06
ATXN3-249ENST00000564606 PCDHGA10Q9Y5H3 936 aa8.46□□□□□ -1.06
ATXN3-249ENST00000564606 CACNA1SQ13698 1873 aa8.46□□□□□ -1.06
ATXN3-249ENST00000564606 SCN7AQ01118 1682 aa8.46□□□□□ -1.06
ATXN3-249ENST00000564606 PLIN4Q96Q06 1357 aa8.46□□□□□ -1.06
ATXN3-249ENST00000564606 CASZ1Q86V15 1759 aa8.45□□□□□ -1.06
ATXN3-249ENST00000564606 PNMA6FA0A0J9YX94 578 aa8.45□□□□□ -1.06
ATXN3-249ENST00000564606 SHTN1A0MZ66 631 aa8.45□□□□□ -1.06
ATXN3-249ENST00000564606 GOLGA6L10A6NI86 522 aa8.45□□□□□ -1.06
ATXN3-249ENST00000564606 B4DLN1 442 aa8.45□□□□□ -1.06
ATXN3-249ENST00000564606 TBX3O15119 743 aa8.45□□□□□ -1.06
ATXN3-249ENST00000564606 KLRC4O43908 158 aa8.45□□□□□ -1.06
ATXN3-249ENST00000564606 HSF2BPO75031 334 aa8.45□□□□□ -1.06
ATXN3-249ENST00000564606 TRIM37O94972 964 aa8.45□□□□□ -1.06
ATXN3-249ENST00000564606 LCA5LO95447 670 aa8.45□□□□□ -1.06
ATXN3-249ENST00000564606 FOSP01100 380 aaPredicted RBP8.45□□□□□ -1.06
ATXN3-249ENST00000564606 RHOXF2BP0C7M4 288 aa8.45□□□□□ -1.06
ATXN3-249ENST00000564606 TNFRSF8P28908 595 aa8.45□□□□□ -1.06
ATXN3-249ENST00000564606 PRDX5P30044 214 aa8.45□□□□□ -1.06
ATXN3-249ENST00000564606 USP8P40818 1118 aa8.45□□□□□ -1.06
ATXN3-249ENST00000564606 ARHGAP25P42331 645 aa8.45□□□□□ -1.06
ATXN3-249ENST00000564606 CDK8P49336 464 aa8.45□□□□□ -1.06
ATXN3-249ENST00000564606 TNNC1P63316 161 aa8.45□□□□□ -1.06
ATXN3-249ENST00000564606 GOLGA8FQ08AF8 430 aa8.45□□□□□ -1.06
ATXN3-249ENST00000564606 GOLGA8DPQ0D2H9 430 aa8.45□□□□□ -1.06
ATXN3-249ENST00000564606 AP3B2Q13367 1082 aa8.45□□□□□ -1.06
ATXN3-249ENST00000564606 CCDC40Q4G0X9 1142 aa8.45□□□□□ -1.06
ATXN3-249ENST00000564606 EARS2Q5JPH6 523 aaKnown RBP8.45□□□□□ -1.06
ATXN3-249ENST00000564606 MICALCLQ6ZW33 695 aa8.45□□□□□ -1.06
ATXN3-249ENST00000564606 SMYD4Q8IYR2 804 aaPredicted RBP8.45□□□□□ -1.06
ATXN3-249ENST00000564606 MYOCDQ8IZQ8 938 aa8.45□□□□□ -1.06
ATXN3-249ENST00000564606 ARFGAP2Q8N6H7 521 aa8.45□□□□□ -1.06
ATXN3-249ENST00000564606 CNBD1Q8NA66 436 aa8.45□□□□□ -1.06
ATXN3-249ENST00000564606 ACRBPQ8NEB7 543 aa8.45□□□□□ -1.06
ATXN3-249ENST00000564606 FAM76AQ8TAV0 307 aa8.45□□□□□ -1.06
ATXN3-249ENST00000564606 COG1Q8WTW3 980 aa8.45□□□□□ -1.06
ATXN3-249ENST00000564606 PURBQ96QR8 312 aaKnown RBP8.45□□□□□ -1.06
ATXN3-249ENST00000564606 MED15Q96RN5 788 aa8.45□□□□□ -1.06
ATXN3-249ENST00000564606 RHOXF2Q9BQY4 288 aa8.45□□□□□ -1.06
ATXN3-249ENST00000564606 RIOX1Q9H6W3 641 aa8.45□□□□□ -1.06
ATXN3-249ENST00000564606 EHMT1Q9H9B1 1298 aa8.45□□□□□ -1.06
ATXN3-249ENST00000564606 METTL14Q9HCE5 456 aaKnown RBP8.45□□□□□ -1.06
ATXN3-249ENST00000564606 ABCB6Q9NP58 842 aa8.45□□□□□ -1.06
ATXN3-249ENST00000564606 CEP72Q9P209 647 aa8.45□□□□□ -1.06
ATXN3-249ENST00000564606 VPS18Q9P253 973 aa8.45□□□□□ -1.06
ATXN3-249ENST00000564606 MYO5AQ9Y4I1 1855 aaKnown RBP8.45□□□□□ -1.06
ATXN3-249ENST00000564606 SLIT2O94813 1529 aa8.44□□□□□ -1.06
ATXN3-249ENST00000564606 GOLGA6BA6NDN3 693 aa8.44□□□□□ -1.06
ATXN3-249ENST00000564606 FAM205CA6NFA0 338 aa8.44□□□□□ -1.06
ATXN3-249ENST00000564606 ERICH4A6NGS2 130 aa8.44□□□□□ -1.06
ATXN3-249ENST00000564606 UBE2Q2LH0YL09 131 aa8.44□□□□□ -1.06
ATXN3-249ENST00000564606 CETN3O15182 167 aa8.44□□□□□ -1.06
ATXN3-249ENST00000564606 PJA2O43164 708 aa8.44□□□□□ -1.06
ATXN3-249ENST00000564606 TOM1O60784 492 aa8.44□□□□□ -1.06
ATXN3-249ENST00000564606 GFPT2O94808 682 aa8.44□□□□□ -1.06
ATXN3-249ENST00000564606 ERLIN2O94905 339 aa8.44□□□□□ -1.06
ATXN3-249ENST00000564606 SEC31AO94979 1220 aaKnown RBP8.44□□□□□ -1.06
ATXN3-249ENST00000564606 TTLL1O95922 423 aa8.44□□□□□ -1.06
ATXN3-249ENST00000564606 SERPING1P05155 500 aa8.44□□□□□ -1.06
ATXN3-249ENST00000564606 IL1R1P14778 569 aa8.44□□□□□ -1.06
ATXN3-249ENST00000564606 RASA1P20936 1047 aa8.44□□□□□ -1.06
ATXN3-249ENST00000564606 BTDP43251 543 aa8.44□□□□□ -1.06
ATXN3-249ENST00000564606 MAGEA1P43355 309 aa8.44□□□□□ -1.06
ATXN3-249ENST00000564606 NOVP48745 357 aa8.44□□□□□ -1.06
ATXN3-249ENST00000564606 USP11P51784 963 aa8.44□□□□□ -1.06
ATXN3-249ENST00000564606 PAK2Q13177 524 aa8.44□□□□□ -1.06
ATXN3-249ENST00000564606 MTF1Q14872 753 aa8.44□□□□□ -1.06
ATXN3-249ENST00000564606 VPS72Q15906 364 aa8.44□□□□□ -1.06
ATXN3-249ENST00000564606 CDC37Q16543 378 aaPredicted RBP8.44□□□□□ -1.06
ATXN3-249ENST00000564606 TXNRD1Q16881 649 aa8.44□□□□□ -1.06
ATXN3-249ENST00000564606 EDRF1Q3B7T1 1238 aa8.44□□□□□ -1.06
ATXN3-249ENST00000564606 NAALADL2Q58DX5 795 aa8.44□□□□□ -1.06
ATXN3-249ENST00000564606 SFMBT2Q5VUG0 894 aa8.44□□□□□ -1.06
ATXN3-249ENST00000564606 TBC1D9BQ66K14 1250 aa8.44□□□□□ -1.06
ATXN3-249ENST00000564606 BICDL1Q6ZP65 573 aa8.44□□□□□ -1.06
ATXN3-249ENST00000564606 CROCCP2Q86T23 111 aa8.44□□□□□ -1.06
ATXN3-249ENST00000564606 SYCE1Q8N0S2 351 aa8.44□□□□□ -1.06
ATXN3-249ENST00000564606 TBCKQ8TEA7 893 aa8.44□□□□□ -1.06
ATXN3-249ENST00000564606 TGFBRAP1Q8WUH2 860 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms