RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 ZSWIM6Q9HCJ5 1215 aa15.73■□□□□ 0.11
CNOT1-206ENST00000564557 POLR3EQ9NVU0 708 aa15.73■□□□□ 0.11
CNOT1-206ENST00000564557 MRVI1Q9Y6F6 885 aa15.73■□□□□ 0.11
CNOT1-206ENST00000564557 V9GY48 417 aaPredicted RBP15.73■□□□□ 0.11
CNOT1-206ENST00000564557 SPDYE3A6NKU9 549 aa15.72■□□□□ 0.11
CNOT1-206ENST00000564557 TLR3O15455 904 aaKnown RBP15.72■□□□□ 0.11
CNOT1-206ENST00000564557 GH1P01241 217 aa15.72■□□□□ 0.11
CNOT1-206ENST00000564557 MYL3P08590 195 aa15.72■□□□□ 0.11
CNOT1-206ENST00000564557 NAPAP54920 295 aa15.72■□□□□ 0.11
CNOT1-206ENST00000564557 NKX3-2P78367 333 aa15.72■□□□□ 0.11
CNOT1-206ENST00000564557 SNX17Q15036 470 aa15.72■□□□□ 0.11
CNOT1-206ENST00000564557 PGM5Q15124 567 aa15.72■□□□□ 0.11
CNOT1-206ENST00000564557 USP17L6PQ6QN14 398 aa15.72■□□□□ 0.11
CNOT1-206ENST00000564557 CXCL17Q6UXB2 119 aa15.72■□□□□ 0.11
CNOT1-206ENST00000564557 FBXL16Q8N461 479 aa15.72■□□□□ 0.11
CNOT1-206ENST00000564557 EHMT1Q9H9B1 1298 aa15.72■□□□□ 0.11
CNOT1-206ENST00000564557 PDRG1Q9NUG6 133 aa15.72■□□□□ 0.11
CNOT1-206ENST00000564557 hCG_1984214I3L0E3 225 aa15.71■□□□□ 0.11
CNOT1-206ENST00000564557 ARVCFO00192 962 aa15.71■□□□□ 0.11
CNOT1-206ENST00000564557 KPNA6O60684 536 aa15.71■□□□□ 0.11
CNOT1-206ENST00000564557 CLTBP09497 229 aa15.71■□□□□ 0.11
CNOT1-206ENST00000564557 ADD1P35611 737 aaKnown RBP15.71■□□□□ 0.11
CNOT1-206ENST00000564557 GNPTABQ3T906 1256 aa15.71■□□□□ 0.11
CNOT1-206ENST00000564557 HABP4Q5JVS0 413 aaKnown RBP15.71■□□□□ 0.11
CNOT1-206ENST00000564557 TMEM63BQ5T3F8 832 aa15.71■□□□□ 0.11
CNOT1-206ENST00000564557 VSIG10LQ86VR7 867 aa15.71■□□□□ 0.11
CNOT1-206ENST00000564557 ZNF713Q8N859 430 aaPredicted RBP15.71■□□□□ 0.11
CNOT1-206ENST00000564557 GPKOWQ92917 476 aaPredicted RBP eCLIP15.71■□□□□ 0.11
CNOT1-206ENST00000564557 TMEM39AQ9NV64 488 aa15.71■□□□□ 0.11
CNOT1-206ENST00000564557 RBM27Q9P2N5 1060 aaKnown RBP15.71■□□□□ 0.11
CNOT1-206ENST00000564557 LRRC37A2A6NM11 1700 aa15.71■□□□□ 0.1
CNOT1-206ENST00000564557 CNTNAP5Q8WYK1 1306 aa15.7■□□□□ 0.1
CNOT1-206ENST00000564557 PIK3CDO00329 1044 aa15.7■□□□□ 0.1
CNOT1-206ENST00000564557 CTAGE5O15320 804 aa15.7■□□□□ 0.1
CNOT1-206ENST00000564557 STAM2O75886 525 aa15.7■□□□□ 0.1
CNOT1-206ENST00000564557 PTGS1P23219 599 aa15.7■□□□□ 0.1
CNOT1-206ENST00000564557 CDC27P30260 824 aa15.7■□□□□ 0.1
CNOT1-206ENST00000564557 MAGEA10P43363 369 aaPredicted RBP15.7■□□□□ 0.1
CNOT1-206ENST00000564557 ANAPC15P60006 121 aa15.7■□□□□ 0.1
CNOT1-206ENST00000564557 MDM2Q00987 491 aaPredicted RBP15.7■□□□□ 0.1
CNOT1-206ENST00000564557 LY6KQ17RY6 165 aa15.7■□□□□ 0.1
CNOT1-206ENST00000564557 DHX37Q8IY37 1157 aaKnown RBP15.7■□□□□ 0.1
CNOT1-206ENST00000564557 COPS5Q92905 334 aa15.7■□□□□ 0.1
CNOT1-206ENST00000564557 TOX2Q96NM4 488 aa15.7■□□□□ 0.1
CNOT1-206ENST00000564557 SEZ6LQ9BYH1 1024 aa15.7■□□□□ 0.1
CNOT1-206ENST00000564557 UPF3BQ9BZI7 483 aaKnown RBP15.7■□□□□ 0.1
CNOT1-206ENST00000564557 UBE2OQ9C0C9 1292 aaKnown RBP15.7■□□□□ 0.1
CNOT1-206ENST00000564557 GLT8D2Q9H1C3 349 aa15.7■□□□□ 0.1
CNOT1-206ENST00000564557 CEP290O15078 2479 aa15.7■□□□□ 0.1
CNOT1-206ENST00000564557 CPLX1O14810 134 aa15.69■□□□□ 0.1
CNOT1-206ENST00000564557 RAG1P15918 1043 aa15.69■□□□□ 0.1
CNOT1-206ENST00000564557 CCT2P78371 535 aaKnown RBP15.69■□□□□ 0.1
CNOT1-206ENST00000564557 ITGA7Q13683 1181 aa15.69■□□□□ 0.1
CNOT1-206ENST00000564557 LAMC2Q13753 1193 aa15.69■□□□□ 0.1
CNOT1-206ENST00000564557 WWC2Q6AWC2 1192 aa15.69■□□□□ 0.1
CNOT1-206ENST00000564557 PPP1R18Q6NYC8 613 aa15.69■□□□□ 0.1
CNOT1-206ENST00000564557 XRRA1Q6P2D8 792 aa15.69■□□□□ 0.1
CNOT1-206ENST00000564557 CCDC62Q6P9F0 684 aa15.69■□□□□ 0.1
CNOT1-206ENST00000564557 CPLX2Q6PUV4 134 aaKnown RBP15.69■□□□□ 0.1
CNOT1-206ENST00000564557 CCDC12Q8WUD4 166 aaPredicted RBP15.69■□□□□ 0.1
CNOT1-206ENST00000564557 MTG1Q9BT17 334 aaPredicted RBP15.69■□□□□ 0.1
CNOT1-206ENST00000564557 AGXT2Q9BYV1 514 aa15.69■□□□□ 0.1
CNOT1-206ENST00000564557 DDX41Q9UJV9 622 aaKnown RBP15.69■□□□□ 0.1
CNOT1-206ENST00000564557 SMCO2A6NFE2 343 aa15.68■□□□□ 0.1
CNOT1-206ENST00000564557 MEIS2O14770 477 aa15.68■□□□□ 0.1
CNOT1-206ENST00000564557 ARIH2O95376 493 aa15.68■□□□□ 0.1
CNOT1-206ENST00000564557 TGFB3P10600 412 aa15.68■□□□□ 0.1
CNOT1-206ENST00000564557 PDIA3P30101 505 aaKnown RBP15.68■□□□□ 0.1
CNOT1-206ENST00000564557 ADCY7P51828 1080 aa15.68■□□□□ 0.1
CNOT1-206ENST00000564557 NUBP1P53384 320 aa15.68■□□□□ 0.1
CNOT1-206ENST00000564557 CHMP4BP1P59074 171 aa15.68■□□□□ 0.1
CNOT1-206ENST00000564557 ANKRD33Q7Z3H0 272 aa15.68■□□□□ 0.1
CNOT1-206ENST00000564557 NLRX1Q86UT6 975 aa15.68■□□□□ 0.1
CNOT1-206ENST00000564557 TRIM22Q8IYM9 498 aa15.68■□□□□ 0.1
CNOT1-206ENST00000564557 ZFP91Q96JP5 570 aaPredicted RBP15.68■□□□□ 0.1
CNOT1-206ENST00000564557 GDF15Q99988 308 aa15.68■□□□□ 0.1
CNOT1-206ENST00000564557 MLXIPQ9HAP2 919 aa15.68■□□□□ 0.1
CNOT1-206ENST00000564557 PDLIM7Q9NR12 457 aa15.68■□□□□ 0.1
CNOT1-206ENST00000564557 FAM217BQ9NTX9 383 aaPredicted RBP15.68■□□□□ 0.1
CNOT1-206ENST00000564557 RTEL1Q9NZ71 1219 aa15.68■□□□□ 0.1
CNOT1-206ENST00000564557 KIAA1217Q5T5P2 1943 aa15.67■□□□□ 0.1
CNOT1-206ENST00000564557 A0A1W2PPC1 479 aa15.67■□□□□ 0.1
CNOT1-206ENST00000564557 A6NJR5 290 aa15.67■□□□□ 0.1
CNOT1-206ENST00000564557 PRPF3O43395 683 aaKnown RBP15.67■□□□□ 0.1
CNOT1-206ENST00000564557 SCG2P13521 617 aa15.67■□□□□ 0.1
CNOT1-206ENST00000564557 BMP8BP34820 402 aa15.67■□□□□ 0.1
CNOT1-206ENST00000564557 PURAQ00577 322 aaKnown RBP15.67■□□□□ 0.1
CNOT1-206ENST00000564557 FUT2Q10981 343 aa15.67■□□□□ 0.1
CNOT1-206ENST00000564557 ANKRD1Q15327 319 aa15.67■□□□□ 0.1
CNOT1-206ENST00000564557 DGKDQ16760 1214 aa15.67■□□□□ 0.1
CNOT1-206ENST00000564557 UBE2SQ16763 222 aa15.67■□□□□ 0.1
CNOT1-206ENST00000564557 FAM47CQ5HY64 1035 aa15.67■□□□□ 0.1
CNOT1-206ENST00000564557 PCNX4Q63HM2 1172 aa15.67■□□□□ 0.1
CNOT1-206ENST00000564557 TEX2Q8IWB9 1127 aa15.67■□□□□ 0.1
CNOT1-206ENST00000564557 IL31RAQ8NI17 732 aa15.67■□□□□ 0.1
CNOT1-206ENST00000564557 AFG1LQ8WV93 481 aa15.67■□□□□ 0.1
CNOT1-206ENST00000564557 ZNF274Q96GC6 653 aaPredicted RBP15.67■□□□□ 0.1
CNOT1-206ENST00000564557 SLC26A6Q9BXS9 759 aa15.67■□□□□ 0.1
CNOT1-206ENST00000564557 RIC8AQ9NPQ8 531 aa15.67■□□□□ 0.1
CNOT1-206ENST00000564557 BARHL2Q9NY43 387 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms