RNA–Protein interactions for RNA: ENST00000564480.1

KNOP1-202, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS ALT2 TSL 2

Gene KNOP1, Length 1,020 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-202ENST00000564480 LRFN3Q9BTN0 628 aa16.13■□□□□ 0.17
KNOP1-202ENST00000564480 C1QTNF1Q9BXJ1 281 aa16.13■□□□□ 0.17
KNOP1-202ENST00000564480 DDX41Q9UJV9 622 aaKnown RBP16.13■□□□□ 0.17
KNOP1-202ENST00000564480 COG5Q9UP83 839 aa16.13■□□□□ 0.17
KNOP1-202ENST00000564480 CCDC171Q6TFL3 1326 aa16.13■□□□□ 0.17
KNOP1-202ENST00000564480 OPLAHO14841 1288 aa16.12■□□□□ 0.17
KNOP1-202ENST00000564480 CXCL10P02778 98 aa16.12■□□□□ 0.17
KNOP1-202ENST00000564480 CKBP12277 381 aa16.12■□□□□ 0.17
KNOP1-202ENST00000564480 RBL2Q08999 1139 aa16.12■□□□□ 0.17
KNOP1-202ENST00000564480 TRIM71Q2Q1W2 868 aaKnown RBP16.12■□□□□ 0.17
KNOP1-202ENST00000564480 QRICH1Q2TAL8 776 aa16.12■□□□□ 0.17
KNOP1-202ENST00000564480 GPATCH4Q5T3I0 446 aaKnown RBP16.12■□□□□ 0.17
KNOP1-202ENST00000564480 DGKHQ86XP1 1220 aa16.12■□□□□ 0.17
KNOP1-202ENST00000564480 CAGE1Q8TC20 777 aa16.12■□□□□ 0.17
KNOP1-202ENST00000564480 CRBNQ96SW2 442 aa16.12■□□□□ 0.17
KNOP1-202ENST00000564480 MPHOSPH6Q99547 160 aaKnown RBP16.12■□□□□ 0.17
KNOP1-202ENST00000564480 SUGCTQ9HAC7 445 aa16.12■□□□□ 0.17
KNOP1-202ENST00000564480 C11orf16Q9NQ32 467 aa16.12■□□□□ 0.17
KNOP1-202ENST00000564480 GTF2IRD1Q9UHL9 959 aa16.12■□□□□ 0.17
KNOP1-202ENST00000564480 B4DLN1 442 aa16.11■□□□□ 0.17
KNOP1-202ENST00000564480 HAS3O00219 553 aa16.11■□□□□ 0.17
KNOP1-202ENST00000564480 KDM4AO75164 1064 aa16.11■□□□□ 0.17
KNOP1-202ENST00000564480 EIF2AK2P19525 551 aaKnown RBP16.11■□□□□ 0.17
KNOP1-202ENST00000564480 KCNJ6P48051 423 aa16.11■□□□□ 0.17
KNOP1-202ENST00000564480 MRPL12P52815 198 aaKnown RBP16.11■□□□□ 0.17
KNOP1-202ENST00000564480 CNKSR3Q6P9H4 555 aa16.11■□□□□ 0.17
KNOP1-202ENST00000564480 PNMA1Q8ND90 353 aa16.11■□□□□ 0.17
KNOP1-202ENST00000564480 NSUN6Q8TEA1 469 aaKnown RBP16.11■□□□□ 0.17
KNOP1-202ENST00000564480 ANKS1AQ92625 1134 aa16.11■□□□□ 0.17
KNOP1-202ENST00000564480 ESR2Q92731 530 aa16.11■□□□□ 0.17
KNOP1-202ENST00000564480 RMDN3Q96TC7 470 aa16.11■□□□□ 0.17
KNOP1-202ENST00000564480 ALG1Q9BT22 464 aa16.11■□□□□ 0.17
KNOP1-202ENST00000564480 MTUS1Q9ULD2 1270 aa16.11■□□□□ 0.17
KNOP1-202ENST00000564480 ABCB11O95342 1321 aa16.11■□□□□ 0.17
KNOP1-202ENST00000564480 COL4A4P53420 1690 aaPredicted RBP16.11■□□□□ 0.17
KNOP1-202ENST00000564480 RGS20O76081 388 aa16.1■□□□□ 0.17
KNOP1-202ENST00000564480 GJB5O95377 273 aa16.1■□□□□ 0.17
KNOP1-202ENST00000564480 ZNF286BP0CG31 522 aa16.1■□□□□ 0.17
KNOP1-202ENST00000564480 PCP11498 1178 aaKnown RBP16.1■□□□□ 0.17
KNOP1-202ENST00000564480 CASTP20810 708 aaKnown RBP16.1■□□□□ 0.17
KNOP1-202ENST00000564480 PSEN2P49810 448 aa16.1■□□□□ 0.17
KNOP1-202ENST00000564480 STXBP2Q15833 593 aa16.1■□□□□ 0.17
KNOP1-202ENST00000564480 ZNF618Q5T7W0 954 aa16.1■□□□□ 0.17
KNOP1-202ENST00000564480 FAM117BQ6P1L5 589 aa16.1■□□□□ 0.17
KNOP1-202ENST00000564480 FAM122AQ96E09 287 aa16.1■□□□□ 0.17
KNOP1-202ENST00000564480 ZBED2Q9BTP6 218 aa16.1■□□□□ 0.17
KNOP1-202ENST00000564480 JMJD4Q9H9V9 463 aa16.1■□□□□ 0.17
KNOP1-202ENST00000564480 VAT1LQ9HCJ6 419 aa16.1■□□□□ 0.17
KNOP1-202ENST00000564480 LINC01553A4QN01 128 aa16.09■□□□□ 0.17
KNOP1-202ENST00000564480 TRIM6-TRIM34B2RNG4 842 aa16.09■□□□□ 0.17
KNOP1-202ENST00000564480 B4E1Z4 1266 aa16.09■□□□□ 0.17
KNOP1-202ENST00000564480 SORBS3O60504 671 aa16.09■□□□□ 0.17
KNOP1-202ENST00000564480 PPP1R11O60927 126 aaPredicted RBP16.09■□□□□ 0.17
KNOP1-202ENST00000564480 F2P00734 622 aa16.09■□□□□ 0.17
KNOP1-202ENST00000564480 NR3C2P08235 984 aa16.09■□□□□ 0.17
KNOP1-202ENST00000564480 SDSP20132 328 aa16.09■□□□□ 0.17
KNOP1-202ENST00000564480 ERVK-21P61565 698 aa16.09■□□□□ 0.17
KNOP1-202ENST00000564480 HDAC1Q13547 482 aaPredicted RBP16.09■□□□□ 0.17
KNOP1-202ENST00000564480 DGKDQ16760 1214 aa16.09■□□□□ 0.17
KNOP1-202ENST00000564480 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.09■□□□□ 0.17
KNOP1-202ENST00000564480 CCDC155Q8N6L0 562 aa16.09■□□□□ 0.17
KNOP1-202ENST00000564480 ENAHQ8N8S7 591 aaPredicted RBP16.09■□□□□ 0.17
KNOP1-202ENST00000564480 RILPL2Q969X0 211 aa16.09■□□□□ 0.17
KNOP1-202ENST00000564480 EMID1Q96A84 441 aaPredicted RBP16.09■□□□□ 0.17
KNOP1-202ENST00000564480 ZFP91Q96JP5 570 aaPredicted RBP16.09■□□□□ 0.17
KNOP1-202ENST00000564480 IWS1Q96ST2 819 aa16.09■□□□□ 0.17
KNOP1-202ENST00000564480 RAD9AQ99638 391 aa16.09■□□□□ 0.17
KNOP1-202ENST00000564480 OSBPL7Q9BZF2 842 aa16.09■□□□□ 0.17
KNOP1-202ENST00000564480 LNPKQ9C0E8 428 aa16.09■□□□□ 0.17
KNOP1-202ENST00000564480 ABHD14A-ACY1A0A1B0GW23 586 aa16.08■□□□□ 0.16
KNOP1-202ENST00000564480 ZNF213O14771 459 aa16.08■□□□□ 0.16
KNOP1-202ENST00000564480 EIF3JO75822 258 aaKnown RBP16.08■□□□□ 0.16
KNOP1-202ENST00000564480 RRP1P56182 461 aaKnown RBP16.08■□□□□ 0.16
KNOP1-202ENST00000564480 SP2Q02086 613 aa16.08■□□□□ 0.16
KNOP1-202ENST00000564480 MKRN4PQ13434 485 aaPredicted RBP16.08■□□□□ 0.16
KNOP1-202ENST00000564480 MFSD10Q14728 455 aa16.08■□□□□ 0.16
KNOP1-202ENST00000564480 KIAA0753Q2KHM9 967 aa16.08■□□□□ 0.16
KNOP1-202ENST00000564480 ARHGEF16Q5VV41 709 aa16.08■□□□□ 0.16
KNOP1-202ENST00000564480 FBXO11Q86XK2 927 aa16.08■□□□□ 0.16
KNOP1-202ENST00000564480 STAG2Q8N3U4 1231 aa16.08■□□□□ 0.16
KNOP1-202ENST00000564480 C7orf31Q8N865 590 aa16.08■□□□□ 0.16
KNOP1-202ENST00000564480 ZSCAN10Q96SZ4 725 aaPredicted RBP16.08■□□□□ 0.16
KNOP1-202ENST00000564480 MAF1Q9H063 256 aa16.08■□□□□ 0.16
KNOP1-202ENST00000564480 RNF41Q9H4P4 317 aaPredicted RBP16.08■□□□□ 0.16
KNOP1-202ENST00000564480 BCAS3Q9H6U6 928 aa16.08■□□□□ 0.16
KNOP1-202ENST00000564480 PXMP2Q9NR77 195 aa16.08■□□□□ 0.16
KNOP1-202ENST00000564480 ZSWIM5Q9P217 1185 aa16.08■□□□□ 0.16
KNOP1-202ENST00000564480 ZBTB47Q9UFB7 747 aaPredicted RBP16.08■□□□□ 0.16
KNOP1-202ENST00000564480 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.07■□□□□ 0.16
KNOP1-202ENST00000564480 FAM86C2PA6NEL3 165 aa16.07■□□□□ 0.16
KNOP1-202ENST00000564480 CFBP00751 764 aa16.07■□□□□ 0.16
KNOP1-202ENST00000564480 HOXD8P13378 290 aaPredicted RBP16.07■□□□□ 0.16
KNOP1-202ENST00000564480 HSD17B4P51659 736 aa16.07■□□□□ 0.16
KNOP1-202ENST00000564480 PTK7Q13308 1070 aa16.07■□□□□ 0.16
KNOP1-202ENST00000564480 SLC35G1Q2M3R5 365 aa16.07■□□□□ 0.16
KNOP1-202ENST00000564480 HSDL1Q3SXM5 330 aa16.07■□□□□ 0.16
KNOP1-202ENST00000564480 TICAM2Q86XR7 235 aa16.07■□□□□ 0.16
KNOP1-202ENST00000564480 MCF2L2Q86YR7 1114 aa16.07■□□□□ 0.16
KNOP1-202ENST00000564480 IL31RAQ8NI17 732 aa16.07■□□□□ 0.16
KNOP1-202ENST00000564480 PPTC7Q8NI37 304 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 133.7 ms