RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 ITGB8P26012 769 aa11.11□□□□□ -0.63
UBFD1-203ENST00000564106 SLC1A4P43007 532 aa11.11□□□□□ -0.63
UBFD1-203ENST00000564106 ME1P48163 572 aa11.11□□□□□ -0.63
UBFD1-203ENST00000564106 RTP1P59025 263 aa11.11□□□□□ -0.63
UBFD1-203ENST00000564106 ZNF445P59923 1031 aa11.11□□□□□ -0.63
UBFD1-203ENST00000564106 TMEM63BQ5T3F8 832 aa11.11□□□□□ -0.63
UBFD1-203ENST00000564106 L1TD1Q5T7N2 865 aaKnown RBP11.11□□□□□ -0.63
UBFD1-203ENST00000564106 SLFN13Q68D06 897 aa11.11□□□□□ -0.63
UBFD1-203ENST00000564106 CCDC73Q6ZRK6 1079 aa11.11□□□□□ -0.63
UBFD1-203ENST00000564106 TEX2Q8IWB9 1127 aa11.11□□□□□ -0.63
UBFD1-203ENST00000564106 LINC00301Q8NCQ3 95 aa11.11□□□□□ -0.63
UBFD1-203ENST00000564106 AGBL1Q96MI9 1066 aa11.11□□□□□ -0.63
UBFD1-203ENST00000564106 PURBQ96QR8 312 aaKnown RBP11.11□□□□□ -0.63
UBFD1-203ENST00000564106 TINF2Q9BSI4 451 aa11.11□□□□□ -0.63
UBFD1-203ENST00000564106 GLT8D2Q9H1C3 349 aa11.11□□□□□ -0.63
UBFD1-203ENST00000564106 GJB4Q9NTQ9 266 aa11.11□□□□□ -0.63
UBFD1-203ENST00000564106 KCNJ14Q9UNX9 436 aa11.11□□□□□ -0.63
UBFD1-203ENST00000564106 MTMR7Q9Y216 660 aa11.11□□□□□ -0.63
UBFD1-203ENST00000564106 BAZ2BQ9UIF8 2168 aaKnown RBP11.1□□□□□ -0.63
UBFD1-203ENST00000564106 PNMA6FA0A0J9YX94 578 aa11.1□□□□□ -0.63
UBFD1-203ENST00000564106 A0A1W2PQ27 194 aa11.1□□□□□ -0.63
UBFD1-203ENST00000564106 A0A1W2PQ64 194 aa11.1□□□□□ -0.63
UBFD1-203ENST00000564106 A0A1W2PQD8 194 aa11.1□□□□□ -0.63
UBFD1-203ENST00000564106 GOLGA6L3A6NEY3 463 aa11.1□□□□□ -0.63
UBFD1-203ENST00000564106 DNM1LO00429 736 aa11.1□□□□□ -0.63
UBFD1-203ENST00000564106 CYTH3O43739 400 aa11.1□□□□□ -0.63
UBFD1-203ENST00000564106 ADAMTS4O75173 837 aa11.1□□□□□ -0.63
UBFD1-203ENST00000564106 SLC25A27O95847 323 aa11.1□□□□□ -0.63
UBFD1-203ENST00000564106 MYCNP04198 464 aaPredicted RBP11.1□□□□□ -0.63
UBFD1-203ENST00000564106 GOLGA8HP0CJ92 632 aa11.1□□□□□ -0.63
UBFD1-203ENST00000564106 BMP8BP34820 402 aa11.1□□□□□ -0.63
UBFD1-203ENST00000564106 ADCYAP1R1P41586 468 aa11.1□□□□□ -0.63
UBFD1-203ENST00000564106 NAPAP54920 295 aa11.1□□□□□ -0.63
UBFD1-203ENST00000564106 CNTN2Q02246 1040 aa11.1□□□□□ -0.63
UBFD1-203ENST00000564106 CEBPZQ03701 1054 aaKnown RBP11.1□□□□□ -0.63
UBFD1-203ENST00000564106 SLC39A14Q15043 492 aa11.1□□□□□ -0.63
UBFD1-203ENST00000564106 ZSCAN23Q3MJ62 389 aa11.1□□□□□ -0.63
UBFD1-203ENST00000564106 TRIM60Q495X7 471 aa11.1□□□□□ -0.63
UBFD1-203ENST00000564106 ADALQ6DHV7 355 aa11.1□□□□□ -0.63
UBFD1-203ENST00000564106 TTBK2Q6IQ55 1244 aa11.1□□□□□ -0.63
UBFD1-203ENST00000564106 KCTD1Q719H9 257 aa11.1□□□□□ -0.63
UBFD1-203ENST00000564106 HEATR3Q7Z4Q2 680 aa11.1□□□□□ -0.63
UBFD1-203ENST00000564106 BLIDQ8IZY5 108 aa11.1□□□□□ -0.63
UBFD1-203ENST00000564106 TEX13BQ9BXU2 312 aa11.1□□□□□ -0.63
UBFD1-203ENST00000564106 KATNBL1Q9H079 304 aa11.1□□□□□ -0.63
UBFD1-203ENST00000564106 C6orf50Q9HD87 102 aa11.1□□□□□ -0.63
UBFD1-203ENST00000564106 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.1□□□□□ -0.63
UBFD1-203ENST00000564106 HOMER2Q9NSB8 354 aa11.1□□□□□ -0.63
UBFD1-203ENST00000564106 PCDHA4Q9UN74 947 aa11.1□□□□□ -0.63
UBFD1-203ENST00000564106 CDH23Q9H251 3354 aa11.1□□□□□ -0.63
UBFD1-203ENST00000564106 hCG_1642624A0A1W2PR95 340 aa11.09□□□□□ -0.63
UBFD1-203ENST00000564106 TRIM43BA6NCK2 446 aa11.09□□□□□ -0.63
UBFD1-203ENST00000564106 SOWAHBA6NEL2 793 aa11.09□□□□□ -0.63
UBFD1-203ENST00000564106 TMEM232C9JQI7 657 aa11.09□□□□□ -0.63
UBFD1-203ENST00000564106 STXBP3O00186 592 aa11.09□□□□□ -0.63
UBFD1-203ENST00000564106 ATP2A1O14983 1001 aa11.09□□□□□ -0.63
UBFD1-203ENST00000564106 BMP3P12645 472 aa11.09□□□□□ -0.63
UBFD1-203ENST00000564106 CAPN2P17655 700 aa11.09□□□□□ -0.63
UBFD1-203ENST00000564106 SNX17Q15036 470 aa11.09□□□□□ -0.63
UBFD1-203ENST00000564106 MUM1L1Q5H9M0 696 aa11.09□□□□□ -0.63
UBFD1-203ENST00000564106 MCTP2Q6DN12 878 aa11.09□□□□□ -0.63
UBFD1-203ENST00000564106 SLC39A5Q6ZMH5 540 aa11.09□□□□□ -0.63
UBFD1-203ENST00000564106 HOMER1Q86YM7 354 aa11.09□□□□□ -0.63
UBFD1-203ENST00000564106 PRPF38AQ8NAV1 312 aaKnown RBP11.09□□□□□ -0.63
UBFD1-203ENST00000564106 TRIM43Q96BQ3 446 aaPredicted RBP11.09□□□□□ -0.63
UBFD1-203ENST00000564106 ZMYND12Q9H0C1 365 aa11.09□□□□□ -0.63
UBFD1-203ENST00000564106 TMEM63CQ9P1W3 806 aa11.09□□□□□ -0.63
UBFD1-203ENST00000564106 ATP11BQ9Y2G3 1177 aa11.09□□□□□ -0.63
UBFD1-203ENST00000564106 FRMPD2Q68DX3 1309 aaPredicted RBP11.09□□□□□ -0.63
UBFD1-203ENST00000564106 SYNRGQ9UMZ2 1314 aa11.09□□□□□ -0.63
UBFD1-203ENST00000564106 CCDC194A0A1B0GVG4 234 aa11.08□□□□□ -0.64
UBFD1-203ENST00000564106 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.08□□□□□ -0.64
UBFD1-203ENST00000564106 ZBTB5O15062 677 aa11.08□□□□□ -0.64
UBFD1-203ENST00000564106 CTAGE5O15320 804 aa11.08□□□□□ -0.64
UBFD1-203ENST00000564106 CUTAO60888 179 aa11.08□□□□□ -0.64
UBFD1-203ENST00000564106 SLC16A2P36021 539 aa11.08□□□□□ -0.64
UBFD1-203ENST00000564106 EPHB4P54760 987 aa11.08□□□□□ -0.64
UBFD1-203ENST00000564106 FAM160A1Q05DH4 1040 aa11.08□□□□□ -0.64
UBFD1-203ENST00000564106 NR5A1Q13285 461 aa11.08□□□□□ -0.64
UBFD1-203ENST00000564106 ORC2Q13416 577 aaPredicted RBP11.08□□□□□ -0.64
UBFD1-203ENST00000564106 KCTD2Q14681 263 aa11.08□□□□□ -0.64
UBFD1-203ENST00000564106 C9orf50Q5SZB4 431 aa11.08□□□□□ -0.64
UBFD1-203ENST00000564106 WWC2Q6AWC2 1192 aa11.08□□□□□ -0.64
UBFD1-203ENST00000564106 CCSAPQ6IQ19 270 aaPredicted RBP11.08□□□□□ -0.64
UBFD1-203ENST00000564106 CCDC174Q6PII3 467 aa11.08□□□□□ -0.64
UBFD1-203ENST00000564106 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.08□□□□□ -0.64
UBFD1-203ENST00000564106 KRT25Q7Z3Z0 450 aa11.08□□□□□ -0.64
UBFD1-203ENST00000564106 MRPS27Q92552 414 aaKnown RBP11.08□□□□□ -0.64
UBFD1-203ENST00000564106 PIGSQ96S52 555 aa11.08□□□□□ -0.64
UBFD1-203ENST00000564106 NUP62CLQ9H1M0 184 aa11.08□□□□□ -0.64
UBFD1-203ENST00000564106 CPVLQ9H3G5 476 aa11.08□□□□□ -0.64
UBFD1-203ENST00000564106 GPCPD1Q9NPB8 672 aa11.08□□□□□ -0.64
UBFD1-203ENST00000564106 PDLIM7Q9NR12 457 aa11.08□□□□□ -0.64
UBFD1-203ENST00000564106 CLIC4Q9Y696 253 aa11.08□□□□□ -0.64
UBFD1-203ENST00000564106 EYSQ5T1H1 3165 aa11.07□□□□□ -0.64
UBFD1-203ENST00000564106 MSCO60682 206 aa11.07□□□□□ -0.64
UBFD1-203ENST00000564106 KINO60870 393 aaKnown RBP11.07□□□□□ -0.64
UBFD1-203ENST00000564106 STAT2P52630 851 aa11.07□□□□□ -0.64
UBFD1-203ENST00000564106 IKQ13123 557 aaPredicted RBP11.07□□□□□ -0.64
UBFD1-203ENST00000564106 NPY5RQ15761 445 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms