RNA–Protein interactions for RNA: ENST00000563963.1

TUBGCP4-207, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 2

Gene TUBGCP4, Length 4,379 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-207ENST00000563963 EDARQ9UNE0 448 aa6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 GTF2A1LQ9UNN4 478 aa6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 PA2G4Q9UQ80 394 aaKnown RBP6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 RPAP1Q9BWH6 1393 aaPredicted RBP6.49□□□□□ -1.37
TUBGCP4-207ENST00000563963 A6NCN8 305 aa6.49□□□□□ -1.37
TUBGCP4-207ENST00000563963 GOLGA8CPA6NN73 597 aa6.49□□□□□ -1.37
TUBGCP4-207ENST00000563963 YKT6O15498 198 aa6.49□□□□□ -1.37
TUBGCP4-207ENST00000563963 MBD3O95983 291 aa6.49□□□□□ -1.37
TUBGCP4-207ENST00000563963 ZFYP08048 801 aaPredicted RBP6.49□□□□□ -1.37
TUBGCP4-207ENST00000563963 CASTP20810 708 aaKnown RBP6.49□□□□□ -1.37
TUBGCP4-207ENST00000563963 MTTPP55157 894 aa6.49□□□□□ -1.37
TUBGCP4-207ENST00000563963 EVCP57679 992 aa6.49□□□□□ -1.37
TUBGCP4-207ENST00000563963 MLLT1Q03111 559 aaPredicted RBP6.49□□□□□ -1.37
TUBGCP4-207ENST00000563963 MTX1Q13505 466 aa6.49□□□□□ -1.37
TUBGCP4-207ENST00000563963 CYP26C1Q6V0L0 522 aa6.49□□□□□ -1.37
TUBGCP4-207ENST00000563963 ZNF354CQ86Y25 554 aa6.49□□□□□ -1.37
TUBGCP4-207ENST00000563963 TMEM151BQ8IW70 566 aa6.49□□□□□ -1.37
TUBGCP4-207ENST00000563963 NPLOC4Q8TAT6 608 aa6.49□□□□□ -1.37
TUBGCP4-207ENST00000563963 BEGAINQ9BUH8 593 aa6.49□□□□□ -1.37
TUBGCP4-207ENST00000563963 CHST12Q9NRB3 414 aa6.49□□□□□ -1.37
TUBGCP4-207ENST00000563963 NDFIP2Q9NV92 336 aa6.49□□□□□ -1.37
TUBGCP4-207ENST00000563963 MYO1AQ9UBC5 1043 aa6.49□□□□□ -1.37
TUBGCP4-207ENST00000563963 FHOD1Q9Y613 1164 aa6.49□□□□□ -1.37
TUBGCP4-207ENST00000563963 CCDC141Q6ZP82 1450 aa6.49□□□□□ -1.37
TUBGCP4-207ENST00000563963 SYCP2Q9BX26 1530 aa6.49□□□□□ -1.37
TUBGCP4-207ENST00000563963 PALM3A6NDB9 673 aaPredicted RBP6.49□□□□□ -1.37
TUBGCP4-207ENST00000563963 APOL1O14791 398 aa6.49□□□□□ -1.37
TUBGCP4-207ENST00000563963 PRMT3O60678 531 aa6.49□□□□□ -1.37
TUBGCP4-207ENST00000563963 RNF40O75150 1001 aa6.49□□□□□ -1.37
TUBGCP4-207ENST00000563963 NPHP4O75161 1426 aaPredicted RBP6.49□□□□□ -1.37
TUBGCP4-207ENST00000563963 MAP3K6O95382 1288 aa6.49□□□□□ -1.37
TUBGCP4-207ENST00000563963 CLTAP09496 248 aa6.49□□□□□ -1.37
TUBGCP4-207ENST00000563963 BTF3P20290 206 aaKnown RBP6.49□□□□□ -1.37
TUBGCP4-207ENST00000563963 PRKACBP22694 351 aa6.49□□□□□ -1.37
TUBGCP4-207ENST00000563963 PRKAR1BP31321 381 aa6.49□□□□□ -1.37
TUBGCP4-207ENST00000563963 LRRC74AQ0VAA2 488 aa6.49□□□□□ -1.37
TUBGCP4-207ENST00000563963 OASLQ15646 514 aaKnown RBP6.49□□□□□ -1.37
TUBGCP4-207ENST00000563963 TCERG1LQ5VWI1 586 aa6.49□□□□□ -1.37
TUBGCP4-207ENST00000563963 E2F7Q96AV8 911 aa6.49□□□□□ -1.37
TUBGCP4-207ENST00000563963 COG8Q96MW5 612 aa6.49□□□□□ -1.37
TUBGCP4-207ENST00000563963 CATSPER2Q96P56 530 aa6.49□□□□□ -1.37
TUBGCP4-207ENST00000563963 HNRNPABQ99729 332 aaKnown RBP6.49□□□□□ -1.37
TUBGCP4-207ENST00000563963 SEMA4AQ9H3S1 761 aa6.49□□□□□ -1.37
TUBGCP4-207ENST00000563963 CLK4Q9HAZ1 481 aaKnown RBP6.49□□□□□ -1.37
TUBGCP4-207ENST00000563963 CAPN10Q9HC96 672 aa6.49□□□□□ -1.37
TUBGCP4-207ENST00000563963 ARFGAP3Q9NP61 516 aa6.49□□□□□ -1.37
TUBGCP4-207ENST00000563963 RHBDL2Q9NX52 303 aa6.49□□□□□ -1.37
TUBGCP4-207ENST00000563963 GOLGA8IPA6NC78 632 aa6.49□□□□□ -1.37
TUBGCP4-207ENST00000563963 ZBTB39O15060 712 aa6.49□□□□□ -1.37
TUBGCP4-207ENST00000563963 BIRC5O15392 142 aa6.49□□□□□ -1.37
TUBGCP4-207ENST00000563963 ARIH2O95376 493 aa6.49□□□□□ -1.37
TUBGCP4-207ENST00000563963 MAP3K9P80192 1104 aa6.49□□□□□ -1.37
TUBGCP4-207ENST00000563963 PUM3Q15397 648 aaKnown RBP6.49□□□□□ -1.37
TUBGCP4-207ENST00000563963 CCDC116Q8IYX3 515 aa6.49□□□□□ -1.37
TUBGCP4-207ENST00000563963 NOC3LQ8WTT2 800 aaKnown RBP6.49□□□□□ -1.37
TUBGCP4-207ENST00000563963 APBA2Q99767 749 aa6.49□□□□□ -1.37
TUBGCP4-207ENST00000563963 BRD9Q9H8M2 597 aa6.49□□□□□ -1.37
TUBGCP4-207ENST00000563963 CCDC144AA2RUR9 1427 aa6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 GOLGA8MH3BSY2 632 aa6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 SEC24DO94855 1032 aaPredicted RBP6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 GBP1P32455 592 aa6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 KIAA1614Q5VZ46 1190 aa6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 SLC15A3Q8IY34 581 aa6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 DZIP1LQ8IYY4 767 aaKnown RBP6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 FAM200AQ8TCP9 573 aa6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 RTFDC1Q9BY42 306 aaPredicted RBP6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 VPS18Q9P253 973 aa6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 TMEM5Q9Y2B1 443 aa6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 FAM169AQ9Y6X4 670 aa6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 NEURL4Q96JN8 1562 aa6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 SRGAP3O43295 1099 aa6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 PRLRP16471 622 aa6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 PLCG2P16885 1265 aa6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 ATF3P18847 181 aa6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 ATP5JP18859 108 aa6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 MTHFRP42898 656 aa6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 AP1B1Q10567 949 aa6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 MSLNQ13421 630 aaPredicted RBP6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 PRKG1Q13976 671 aa6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 KRT71Q3SY84 523 aa6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 HYIQ5T013 277 aa6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 C20orf194Q5TEA3 1177 aa6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 HIBCHQ6NVY1 386 aaPredicted RBP6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 CFAP161Q6P656 301 aa6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 POTEAQ6S8J7 498 aa6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 VPS36Q86VN1 386 aa6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 NPAS4Q8IUM7 802 aa6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 IFT81Q8WYA0 676 aa6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 DPF3Q92784 378 aa6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 CNKSR1Q969H4 720 aa6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 TBC1D32Q96NH3 1257 aa6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 PSTPIP2Q9H939 334 aa6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 C8orf4Q9NR00 106 aa6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 STAP2Q9UGK3 403 aa6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 RANBP6O60518 1105 aaKnown RBP6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 BUB1BO60566 1050 aaPredicted RBP6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 KATNA1O75449 491 aa6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 LCA5LO95447 670 aa6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 SWSAP1Q6NVH7 229 aa6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 ZNF554Q86TJ5 538 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms