RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, human

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HERPUD1-208	ENST00000563911	WDR64	B1ANS9	1081 aa		8.04	□□□□□ -1.12
HERPUD1-208	ENST00000563911	SHOX	O15266	292 aa		8.04	□□□□□ -1.12
HERPUD1-208	ENST00000563911	ITGA4	P13612	1032 aa		8.04	□□□□□ -1.12
HERPUD1-208	ENST00000563911	CANX	P27824	592 aa	Known RBP	8.04	□□□□□ -1.12
HERPUD1-208	ENST00000563911	ARHGAP27	Q6ZUM4	889 aa		8.04	□□□□□ -1.12
HERPUD1-208	ENST00000563911	LRRC47	Q8N1G4	583 aa	Known RBP	8.04	□□□□□ -1.12
HERPUD1-208	ENST00000563911	LRRN4CL	Q8ND94	238 aa		8.04	□□□□□ -1.12
HERPUD1-208	ENST00000563911	THAP3	Q8WTV1	239 aa	Predicted RBP	8.04	□□□□□ -1.12
HERPUD1-208	ENST00000563911	SYTL4	Q96C24	671 aa	Predicted RBP	8.04	□□□□□ -1.12
HERPUD1-208	ENST00000563911	LTV1	Q96GA3	475 aa	Predicted RBP	8.04	□□□□□ -1.12
HERPUD1-208	ENST00000563911	DBNDD2	Q9BQY9	259 aa		8.04	□□□□□ -1.12
HERPUD1-208	ENST00000563911	SPATA9	Q9BWV2	254 aa		8.04	□□□□□ -1.12
HERPUD1-208	ENST00000563911	OSBPL1A	Q9BXW6	950 aa		8.04	□□□□□ -1.12
HERPUD1-208	ENST00000563911	PRDM14	Q9GZV8	571 aa		8.04	□□□□□ -1.12
HERPUD1-208	ENST00000563911	ASCC2	Q9H1I8	757 aa	Predicted RBP	8.04	□□□□□ -1.12
HERPUD1-208	ENST00000563911	KANSL2	Q9H9L4	492 aa		8.04	□□□□□ -1.12
HERPUD1-208	ENST00000563911	WHRN	Q9P202	907 aa		8.04	□□□□□ -1.12
HERPUD1-208	ENST00000563911	APEX2	Q9UBZ4	518 aa		8.04	□□□□□ -1.12
HERPUD1-208	ENST00000563911	KTN1	Q86UP2	1357 aa	Known RBP	8.03	□□□□□ -1.12
HERPUD1-208	ENST00000563911	ANKRD36B	Q8N2N9	1353 aa		8.03	□□□□□ -1.12
HERPUD1-208	ENST00000563911	PRR33	A8MZF0	331 aa		8.03	□□□□□ -1.12
HERPUD1-208	ENST00000563911	IGF2BP3	O00425	579 aa	Known RBP eCLIP	8.03	□□□□□ -1.12
HERPUD1-208	ENST00000563911	SNW1	Q13573	536 aa	Known RBP	8.03	□□□□□ -1.12
HERPUD1-208	ENST00000563911	C2orf27A	Q580R0	203 aa		8.03	□□□□□ -1.12
HERPUD1-208	ENST00000563911	DTWD2	Q8NBA8	298 aa		8.03	□□□□□ -1.12
HERPUD1-208	ENST00000563911	ADCY4	Q8NFM4	1077 aa		8.03	□□□□□ -1.12
HERPUD1-208	ENST00000563911	BRF1	Q92994	677 aa		8.03	□□□□□ -1.12
HERPUD1-208	ENST00000563911		Q96M66	194 aa		8.03	□□□□□ -1.12
HERPUD1-208	ENST00000563911	CCNL1	Q9UK58	526 aa	Predicted RBP	8.03	□□□□□ -1.12
HERPUD1-208	ENST00000563911	CD2AP	Q9Y5K6	639 aa		8.03	□□□□□ -1.12
HERPUD1-208	ENST00000563911	EVC2	Q86UK5	1308 aa		8.03	□□□□□ -1.12
HERPUD1-208	ENST00000563911	FAM155A	B1AL88	458 aa	Predicted RBP	8.02	□□□□□ -1.13
HERPUD1-208	ENST00000563911	NOP56	O00567	594 aa	Known RBP	8.02	□□□□□ -1.13
HERPUD1-208	ENST00000563911	GSC2	O15499	205 aa		8.02	□□□□□ -1.13
HERPUD1-208	ENST00000563911	CLSTN1	O94985	981 aa		8.02	□□□□□ -1.13
HERPUD1-208	ENST00000563911	IGLV1-40	P01703	118 aa		8.02	□□□□□ -1.13
HERPUD1-208	ENST00000563911	H2AFB1	P0C5Y9	115 aa		8.02	□□□□□ -1.13
HERPUD1-208	ENST00000563911	H2AFB2	P0C5Z0	115 aa		8.02	□□□□□ -1.13
HERPUD1-208	ENST00000563911	FST	P19883	344 aa		8.02	□□□□□ -1.13
HERPUD1-208	ENST00000563911	ZNF445	P59923	1031 aa		8.02	□□□□□ -1.13
HERPUD1-208	ENST00000563911	MFSD4A	Q8N468	514 aa		8.02	□□□□□ -1.13
HERPUD1-208	ENST00000563911	BVES	Q8NE79	360 aa		8.02	□□□□□ -1.13
HERPUD1-208	ENST00000563911	SHKBP1	Q8TBC3	707 aa		8.02	□□□□□ -1.13
HERPUD1-208	ENST00000563911	IP6K1	Q92551	441 aa		8.02	□□□□□ -1.13
HERPUD1-208	ENST00000563911	SGSM3	Q96HU1	749 aa		8.02	□□□□□ -1.13
HERPUD1-208	ENST00000563911	METTL22	Q9BUU2	404 aa	Predicted RBP	8.02	□□□□□ -1.13
HERPUD1-208	ENST00000563911	SLC12A5	Q9H2X9	1139 aa		8.02	□□□□□ -1.13
HERPUD1-208	ENST00000563911	LRRC4C	Q9HCJ2	640 aa		8.02	□□□□□ -1.13
HERPUD1-208	ENST00000563911	GFOD1	Q9NXC2	390 aa		8.02	□□□□□ -1.13
HERPUD1-208	ENST00000563911	AKT3	Q9Y243	479 aa		8.02	□□□□□ -1.13
HERPUD1-208	ENST00000563911	PCNT	O95613	3336 aa		8.02	□□□□□ -1.13
HERPUD1-208	ENST00000563911	MEGF6	O75095	1541 aa		8.02	□□□□□ -1.13
HERPUD1-208	ENST00000563911	FAM208A	Q9UK61	1670 aa	Known RBP	8.02	□□□□□ -1.13
HERPUD1-208	ENST00000563911	DOT1L	Q8TEK3	1739 aa		8.01	□□□□□ -1.13
HERPUD1-208	ENST00000563911	TOGARAM1	Q9Y4F4	1720 aa		8.01	□□□□□ -1.13
HERPUD1-208	ENST00000563911		A0A1W2PQU0	124 aa		8.01	□□□□□ -1.13
HERPUD1-208	ENST00000563911	ITGAV	P06756	1048 aa		8.01	□□□□□ -1.13
HERPUD1-208	ENST00000563911	FAM153B	P0C7A2	387 aa		8.01	□□□□□ -1.13
HERPUD1-208	ENST00000563911	ZNF865	P0CJ78	1059 aa	Predicted RBP	8.01	□□□□□ -1.13
HERPUD1-208	ENST00000563911	PPP2R5D	Q14738	602 aa		8.01	□□□□□ -1.13
HERPUD1-208	ENST00000563911	TMC3	Q7Z5M5	1100 aa		8.01	□□□□□ -1.13
HERPUD1-208	ENST00000563911	FAM181A	Q8N9Y4	354 aa		8.01	□□□□□ -1.13
HERPUD1-208	ENST00000563911	DSCC1	Q9BVC3	393 aa		8.01	□□□□□ -1.13
HERPUD1-208	ENST00000563911	LGR4	Q9BXB1	951 aa		8.01	□□□□□ -1.13
HERPUD1-208	ENST00000563911	NOL6	Q9H6R4	1146 aa	Known RBP	8.01	□□□□□ -1.13
HERPUD1-208	ENST00000563911	LEMD3	Q9Y2U8	911 aa		8.01	□□□□□ -1.13
HERPUD1-208	ENST00000563911	CAPN6	Q9Y6Q1	641 aa		8.01	□□□□□ -1.13
HERPUD1-208	ENST00000563911	LTN1	O94822	1766 aa		8.01	□□□□□ -1.13
HERPUD1-208	ENST00000563911	USP54	Q70EL1	1684 aa		8.01	□□□□□ -1.13
HERPUD1-208	ENST00000563911	KAT6B	Q8WYB5	2073 aa		8.01	□□□□□ -1.13
HERPUD1-208	ENST00000563911	IGSF1	Q8N6C5	1336 aa		8.01	□□□□□ -1.13
HERPUD1-208	ENST00000563911	MON2	Q7Z3U7	1717 aa		8	□□□□□ -1.13
HERPUD1-208	ENST00000563911	RGPD2	P0DJD1	1756 aa		8	□□□□□ -1.13
HERPUD1-208	ENST00000563911		A0A087WZG4	1122 aa		8	□□□□□ -1.13
HERPUD1-208	ENST00000563911	ESYT3	A0FGR9	886 aa		8	□□□□□ -1.13
HERPUD1-208	ENST00000563911	MEIS1	O00470	390 aa		8	□□□□□ -1.13
HERPUD1-208	ENST00000563911	ITIH2	P19823	946 aa		8	□□□□□ -1.13
HERPUD1-208	ENST00000563911	HSD3B2	P26439	372 aa		8	□□□□□ -1.13
HERPUD1-208	ENST00000563911	TNK2	Q07912	1038 aa		8	□□□□□ -1.13
HERPUD1-208	ENST00000563911	NMI	Q13287	307 aa	Predicted RBP	8	□□□□□ -1.13
HERPUD1-208	ENST00000563911	HSP90AA2P	Q14568	343 aa	Predicted RBP	8	□□□□□ -1.13
HERPUD1-208	ENST00000563911	CLEC16A	Q2KHT3	1053 aa		8	□□□□□ -1.13
HERPUD1-208	ENST00000563911	C22orf34	Q6ZV56	151 aa		8	□□□□□ -1.13
HERPUD1-208	ENST00000563911	HOMER1	Q86YM7	354 aa		8	□□□□□ -1.13
HERPUD1-208	ENST00000563911	FIBCD1	Q8N539	461 aa		8	□□□□□ -1.13
HERPUD1-208	ENST00000563911	USHBP1	Q8N6Y0	703 aa		8	□□□□□ -1.13
HERPUD1-208	ENST00000563911	ZNF513	Q8N8E2	541 aa	Predicted RBP	8	□□□□□ -1.13
HERPUD1-208	ENST00000563911	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	8	□□□□□ -1.13
HERPUD1-208	ENST00000563911	ZCRB1	Q8TBF4	217 aa	Known RBP	8	□□□□□ -1.13
HERPUD1-208	ENST00000563911	PIWIL2	Q8TC59	973 aa	Known RBP	8	□□□□□ -1.13
HERPUD1-208	ENST00000563911	RCC1L	Q96I51	464 aa	Known RBP	8	□□□□□ -1.13
HERPUD1-208	ENST00000563911	NMRK2	Q9NPI5	230 aa		8	□□□□□ -1.13
HERPUD1-208	ENST00000563911	FANCL	Q9NW38	375 aa		8	□□□□□ -1.13
HERPUD1-208	ENST00000563911	DIS3	Q9Y2L1	958 aa	Known RBP	8	□□□□□ -1.13
HERPUD1-208	ENST00000563911	FHOD1	Q9Y613	1164 aa		8	□□□□□ -1.13
HERPUD1-208	ENST00000563911	ENPP3	O14638	875 aa		7.99	□□□□□ -1.13
HERPUD1-208	ENST00000563911	MSTN	O14793	375 aa		7.99	□□□□□ -1.13
HERPUD1-208	ENST00000563911	SIGLEC6	O43699	453 aa		7.99	□□□□□ -1.13
HERPUD1-208	ENST00000563911	CDC45	O75419	566 aa		7.99	□□□□□ -1.13
HERPUD1-208	ENST00000563911	SQSTM1	Q13501	440 aa		7.99	□□□□□ -1.13

Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms