RNA–Protein interactions for RNA: ENST00000563824.5

TCF4-220, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-220ENST00000563824 RAD17O75943 681 aa7.24□□□□□ -1.25
TCF4-220ENST00000563824 GJB6O95452 261 aa7.24□□□□□ -1.25
TCF4-220ENST00000563824 TNNT2P45379 298 aaPredicted RBP7.24□□□□□ -1.25
TCF4-220ENST00000563824 ID3Q02535 119 aa7.24□□□□□ -1.25
TCF4-220ENST00000563824 TCIRG1Q13488 830 aa7.24□□□□□ -1.25
TCF4-220ENST00000563824 DUOXA2Q1HG44 320 aa7.24□□□□□ -1.25
TCF4-220ENST00000563824 C6orf15Q6UXA7 325 aaPredicted RBP7.24□□□□□ -1.25
TCF4-220ENST00000563824 NLRC3Q7RTR2 1065 aa7.24□□□□□ -1.25
TCF4-220ENST00000563824 DTWD1Q8N5C7 304 aa7.24□□□□□ -1.25
TCF4-220ENST00000563824 SH3TC2Q8TF17 1288 aa7.24□□□□□ -1.25
TCF4-220ENST00000563824 UBASH3BQ8TF42 649 aa7.24□□□□□ -1.25
TCF4-220ENST00000563824 ZNF333Q96JL9 665 aa7.24□□□□□ -1.25
TCF4-220ENST00000563824 DNAJC7Q99615 494 aa7.24□□□□□ -1.25
TCF4-220ENST00000563824 HTATIP2Q9BUP3 242 aa7.24□□□□□ -1.25
TCF4-220ENST00000563824 KDM3BQ7LBC6 1761 aa7.23□□□□□ -1.25
TCF4-220ENST00000563824 MANSC4A6NHS7 340 aaPredicted RBP7.23□□□□□ -1.25
TCF4-220ENST00000563824 ENPP3O14638 875 aa7.23□□□□□ -1.25
TCF4-220ENST00000563824 SNRPA1P09661 255 aaKnown RBP7.23□□□□□ -1.25
TCF4-220ENST00000563824 RAG1P15918 1043 aa7.23□□□□□ -1.25
TCF4-220ENST00000563824 IL13P35225 146 aa7.23□□□□□ -1.25
TCF4-220ENST00000563824 NF2P35240 595 aa7.23□□□□□ -1.25
TCF4-220ENST00000563824 RAC1P63000 192 aa7.23□□□□□ -1.25
TCF4-220ENST00000563824 SLC4A8Q2Y0W8 1093 aa7.23□□□□□ -1.25
TCF4-220ENST00000563824 TBC1D10BQ4KMP7 808 aaPredicted RBP7.23□□□□□ -1.25
TCF4-220ENST00000563824 ARSHQ5FYA8 562 aa7.23□□□□□ -1.25
TCF4-220ENST00000563824 PPM1JQ5JR12 505 aa7.23□□□□□ -1.25
TCF4-220ENST00000563824 OTUD7BQ6GQQ9 843 aa7.23□□□□□ -1.25
TCF4-220ENST00000563824 CYFIP1Q7L576 1253 aa7.23□□□□□ -1.25
TCF4-220ENST00000563824 FAM178BQ8IXR5 827 aa7.23□□□□□ -1.25
TCF4-220ENST00000563824 MICAL1Q8TDZ2 1067 aa7.23□□□□□ -1.25
TCF4-220ENST00000563824 RNPC3Q96LT9 517 aaKnown RBP7.23□□□□□ -1.25
TCF4-220ENST00000563824 RUSC1Q9BVN2 902 aa7.23□□□□□ -1.25
TCF4-220ENST00000563824 ADAM30Q9UKF2 790 aa7.23□□□□□ -1.25
TCF4-220ENST00000563824 AP4E1Q9UPM8 1137 aa7.23□□□□□ -1.25
TCF4-220ENST00000563824 HIF3AQ9Y2N7 669 aa7.23□□□□□ -1.25
TCF4-220ENST00000563824 COL6A3P12111 3177 aa7.22□□□□□ -1.25
TCF4-220ENST00000563824 ZNF609O15014 1411 aa7.22□□□□□ -1.25
TCF4-220ENST00000563824 DEAF1O75398 565 aaPredicted RBP7.22□□□□□ -1.25
TCF4-220ENST00000563824 CDC45O75419 566 aa7.22□□□□□ -1.25
TCF4-220ENST00000563824 CELA2BP08218 269 aaPredicted RBP7.22□□□□□ -1.25
TCF4-220ENST00000563824 NME1P15531 152 aaKnown RBP7.22□□□□□ -1.25
TCF4-220ENST00000563824 MMP14P50281 582 aa7.22□□□□□ -1.25
TCF4-220ENST00000563824 ERVK-24P63145 666 aa7.22□□□□□ -1.25
TCF4-220ENST00000563824 ZC3H12AQ5D1E8 599 aaKnown RBP7.22□□□□□ -1.25
TCF4-220ENST00000563824 VHLLQ6RSH7 139 aa7.22□□□□□ -1.25
TCF4-220ENST00000563824 PPP1R42Q7Z4L9 355 aa7.22□□□□□ -1.25
TCF4-220ENST00000563824 ANKRD13AQ8IZ07 590 aa7.22□□□□□ -1.25
TCF4-220ENST00000563824 TAB3Q8N5C8 712 aaPredicted RBP7.22□□□□□ -1.25
TCF4-220ENST00000563824 FAM13CQ8NE31 585 aa7.22□□□□□ -1.25
TCF4-220ENST00000563824 NEDD1Q8NHV4 660 aa7.22□□□□□ -1.25
TCF4-220ENST00000563824 DPF3Q92784 378 aa7.22□□□□□ -1.25
TCF4-220ENST00000563824 ATG4CQ96DT6 458 aa7.22□□□□□ -1.25
TCF4-220ENST00000563824 WNT10AQ9GZT5 417 aa7.22□□□□□ -1.25
TCF4-220ENST00000563824 KCNK4Q9NYG8 393 aa7.22□□□□□ -1.25
TCF4-220ENST00000563824 GGA3Q9NZ52 723 aa7.22□□□□□ -1.25
TCF4-220ENST00000563824 ADAMTS8Q9UP79 889 aa7.22□□□□□ -1.25
TCF4-220ENST00000563824 SIPA1L3O60292 1781 aaPredicted RBP7.22□□□□□ -1.25
TCF4-220ENST00000563824 DDX60Q8IY21 1712 aaKnown RBP7.21□□□□□ -1.25
TCF4-220ENST00000563824 SLC22A31A6NKX4 558 aa7.21□□□□□ -1.26
TCF4-220ENST00000563824 YDJCA8MPS7 323 aa7.21□□□□□ -1.26
TCF4-220ENST00000563824 GNAT3A8MTJ3 354 aa7.21□□□□□ -1.26
TCF4-220ENST00000563824 PSMD14O00487 310 aa7.21□□□□□ -1.26
TCF4-220ENST00000563824 TMPRSS2O15393 492 aa7.21□□□□□ -1.26
TCF4-220ENST00000563824 DLGAP3O95886 979 aa7.21□□□□□ -1.26
TCF4-220ENST00000563824 SLURP2P0DP57 97 aa7.21□□□□□ -1.26
TCF4-220ENST00000563824 DGKGP49619 791 aa7.21□□□□□ -1.26
TCF4-220ENST00000563824 YARSP54577 528 aaKnown RBP7.21□□□□□ -1.26
TCF4-220ENST00000563824 MTHFSDQ2M296 383 aaKnown RBP7.21□□□□□ -1.26
TCF4-220ENST00000563824 SLC9C1Q4G0N8 1177 aa7.21□□□□□ -1.26
TCF4-220ENST00000563824 PARP10Q53GL7 1025 aa7.21□□□□□ -1.26
TCF4-220ENST00000563824 SLC10A5Q5PT55 438 aa7.21□□□□□ -1.26
TCF4-220ENST00000563824 EXOSC6Q5RKV6 272 aaKnown RBP7.21□□□□□ -1.26
TCF4-220ENST00000563824 TMEM201Q5SNT2 666 aa7.21□□□□□ -1.26
TCF4-220ENST00000563824 XP32Q5T750 250 aa7.21□□□□□ -1.26
TCF4-220ENST00000563824 RNF187Q5TA31 235 aaPredicted RBP7.21□□□□□ -1.26
TCF4-220ENST00000563824 LYPD4Q6UWN0 246 aa7.21□□□□□ -1.26
TCF4-220ENST00000563824 ACAD11Q709F0 780 aa7.21□□□□□ -1.26
TCF4-220ENST00000563824 ARMC9Q7Z3E5 817 aa7.21□□□□□ -1.26
TCF4-220ENST00000563824 PHACTR4Q8IZ21 702 aa7.21□□□□□ -1.26
TCF4-220ENST00000563824 AGBL3Q8NEM8 1001 aa7.21□□□□□ -1.26
TCF4-220ENST00000563824 SLKQ9H2G2 1235 aaPredicted RBP7.21□□□□□ -1.26
TCF4-220ENST00000563824 PHAXQ9H814 394 aaKnown RBP7.21□□□□□ -1.26
TCF4-220ENST00000563824 PCDHGC5Q9Y5F6 944 aa7.21□□□□□ -1.26
TCF4-220ENST00000563824 USP16Q9Y5T5 823 aa7.21□□□□□ -1.26
TCF4-220ENST00000563824 ABCC12Q96J65 1359 aa7.2□□□□□ -1.26
TCF4-220ENST00000563824 LAMB1P07942 1786 aa7.2□□□□□ -1.26
TCF4-220ENST00000563824 NUP98P52948 1817 aa7.2□□□□□ -1.26
TCF4-220ENST00000563824 DNAJA2O60884 412 aa7.2□□□□□ -1.26
TCF4-220ENST00000563824 VIL1P09327 827 aaKnown RBP7.2□□□□□ -1.26
TCF4-220ENST00000563824 ZBTB48P10074 688 aaPredicted RBP7.2□□□□□ -1.26
TCF4-220ENST00000563824 PRMT2P55345 433 aa7.2□□□□□ -1.26
TCF4-220ENST00000563824 ZNF280AP59817 542 aaPredicted RBP7.2□□□□□ -1.26
TCF4-220ENST00000563824 SP3Q02447 781 aa7.2□□□□□ -1.26
TCF4-220ENST00000563824 DLK2Q6UY11 383 aa7.2□□□□□ -1.26
TCF4-220ENST00000563824 UNC5AQ6ZN44 842 aa7.2□□□□□ -1.26
TCF4-220ENST00000563824 EEPD1Q7L9B9 569 aa7.2□□□□□ -1.26
TCF4-220ENST00000563824 APPBP2Q92624 585 aa7.2□□□□□ -1.26
TCF4-220ENST00000563824 ACSF2Q96CM8 615 aaPredicted RBP7.2□□□□□ -1.26
TCF4-220ENST00000563824 EYA3Q99504 573 aa7.2□□□□□ -1.26
TCF4-220ENST00000563824 CNNM2Q9H8M5 875 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms