RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 SEMA3FQ13275 785 aa17.09■□□□□ 0.33
RPUSD1-204ENST00000563560 PPP2R5BQ15173 497 aa17.09■□□□□ 0.33
RPUSD1-204ENST00000563560 RTN1Q16799 776 aa17.09■□□□□ 0.33
RPUSD1-204ENST00000563560 WWC2Q6AWC2 1192 aa17.09■□□□□ 0.33
RPUSD1-204ENST00000563560 USP17L6PQ6QN14 398 aa17.09■□□□□ 0.33
RPUSD1-204ENST00000563560 RUFY3Q7L099 469 aa17.09■□□□□ 0.33
RPUSD1-204ENST00000563560 BRF1Q92994 677 aa17.09■□□□□ 0.33
RPUSD1-204ENST00000563560 GLT1D1Q96MS3 346 aa17.09■□□□□ 0.33
RPUSD1-204ENST00000563560 MPHOSPH6Q99547 160 aaKnown RBP17.09■□□□□ 0.33
RPUSD1-204ENST00000563560 TANC1Q9C0D5 1861 aa17.08■□□□□ 0.33
RPUSD1-204ENST00000563560 B4DLN1 442 aa17.08■□□□□ 0.32
RPUSD1-204ENST00000563560 CABYRO75952 493 aa17.08■□□□□ 0.32
RPUSD1-204ENST00000563560 TXNP10599 105 aaKnown RBP17.08■□□□□ 0.32
RPUSD1-204ENST00000563560 ADD1P35611 737 aaKnown RBP17.08■□□□□ 0.32
RPUSD1-204ENST00000563560 MRPL12P52815 198 aaKnown RBP17.08■□□□□ 0.32
RPUSD1-204ENST00000563560 SP2Q02086 613 aa17.08■□□□□ 0.32
RPUSD1-204ENST00000563560 TTLL4Q14679 1199 aa17.08■□□□□ 0.32
RPUSD1-204ENST00000563560 LY6KQ17RY6 165 aa17.08■□□□□ 0.32
RPUSD1-204ENST00000563560 CCDC82Q8N4S0 544 aa17.08■□□□□ 0.32
RPUSD1-204ENST00000563560 GPKOWQ92917 476 aaPredicted RBP eCLIP17.08■□□□□ 0.32
RPUSD1-204ENST00000563560 AP5M1Q9H0R1 490 aa17.08■□□□□ 0.32
RPUSD1-204ENST00000563560 GOLGA8AA7E2F4 631 aa17.07■□□□□ 0.32
RPUSD1-204ENST00000563560 GOLGA8BA8MQT2 603 aa17.07■□□□□ 0.32
RPUSD1-204ENST00000563560 SOX1O00570 391 aaPredicted RBP17.07■□□□□ 0.32
RPUSD1-204ENST00000563560 PQBP1O60828 265 aaKnown RBP17.07■□□□□ 0.32
RPUSD1-204ENST00000563560 CLTBP09497 229 aa17.07■□□□□ 0.32
RPUSD1-204ENST00000563560 MDM2Q00987 491 aaPredicted RBP17.07■□□□□ 0.32
RPUSD1-204ENST00000563560 PKN1Q16512 942 aa17.07■□□□□ 0.32
RPUSD1-204ENST00000563560 SEPT14Q6ZU15 432 aa17.07■□□□□ 0.32
RPUSD1-204ENST00000563560 NOL8Q76FK4 1167 aaKnown RBP17.07■□□□□ 0.32
RPUSD1-204ENST00000563560 OR6J1Q8NGC5 347 aa17.07■□□□□ 0.32
RPUSD1-204ENST00000563560 INPP4AQ96PE3 977 aaPredicted RBP17.07■□□□□ 0.32
RPUSD1-204ENST00000563560 TRIP12Q14669 1992 aaPredicted RBP17.07■□□□□ 0.32
RPUSD1-204ENST00000563560 STXBP3O00186 592 aa17.06■□□□□ 0.32
RPUSD1-204ENST00000563560 ADAMTS3O15072 1205 aa17.06■□□□□ 0.32
RPUSD1-204ENST00000563560 SEC24BO95487 1268 aa17.06■□□□□ 0.32
RPUSD1-204ENST00000563560 PSMA5P28066 241 aa17.06■□□□□ 0.32
RPUSD1-204ENST00000563560 PDIA3P30101 505 aaKnown RBP17.06■□□□□ 0.32
RPUSD1-204ENST00000563560 ICAM3P32942 547 aa17.06■□□□□ 0.32
RPUSD1-204ENST00000563560 CPT1AP50416 773 aa17.06■□□□□ 0.32
RPUSD1-204ENST00000563560 PSMC6P62333 389 aa17.06■□□□□ 0.32
RPUSD1-204ENST00000563560 ITGA7Q13683 1181 aa17.06■□□□□ 0.32
RPUSD1-204ENST00000563560 FCHSD1Q86WN1 690 aa17.06■□□□□ 0.32
RPUSD1-204ENST00000563560 KAT2BQ92831 832 aa17.06■□□□□ 0.32
RPUSD1-204ENST00000563560 ZFP91Q96JP5 570 aaPredicted RBP17.06■□□□□ 0.32
RPUSD1-204ENST00000563560 CTAGE1Q96RT6 745 aa17.06■□□□□ 0.32
RPUSD1-204ENST00000563560 BCAS3Q9H6U6 928 aa17.06■□□□□ 0.32
RPUSD1-204ENST00000563560 SEC63Q9UGP8 760 aaKnown RBP17.06■□□□□ 0.32
RPUSD1-204ENST00000563560 MROH7Q68CQ1 1323 aa17.05■□□□□ 0.32
RPUSD1-204ENST00000563560 SCN5AQ14524 2016 aa17.05■□□□□ 0.32
RPUSD1-204ENST00000563560 MMP3P08254 477 aa17.05■□□□□ 0.32
RPUSD1-204ENST00000563560 CLK2P49760 499 aaKnown RBP17.05■□□□□ 0.32
RPUSD1-204ENST00000563560 EPHB4P54760 987 aa17.05■□□□□ 0.32
RPUSD1-204ENST00000563560 UBE2SQ16763 222 aa17.05■□□□□ 0.32
RPUSD1-204ENST00000563560 MYSM1Q5VVJ2 828 aa17.05■□□□□ 0.32
RPUSD1-204ENST00000563560 PCNX4Q63HM2 1172 aa17.05■□□□□ 0.32
RPUSD1-204ENST00000563560 PPP1R18Q6NYC8 613 aa17.05■□□□□ 0.32
RPUSD1-204ENST00000563560 SYNE3Q6ZMZ3 975 aa17.05■□□□□ 0.32
RPUSD1-204ENST00000563560 VWCEQ96DN2 955 aa17.05■□□□□ 0.32
RPUSD1-204ENST00000563560 SEZ6LQ9BYH1 1024 aa17.05■□□□□ 0.32
RPUSD1-204ENST00000563560 PSTPIP2Q9H939 334 aa17.05■□□□□ 0.32
RPUSD1-204ENST00000563560 POLR3EQ9NVU0 708 aa17.05■□□□□ 0.32
RPUSD1-204ENST00000563560 BARHL2Q9NY43 387 aa17.05■□□□□ 0.32
RPUSD1-204ENST00000563560 GTF3C3Q9Y5Q9 886 aa17.05■□□□□ 0.32
RPUSD1-204ENST00000563560 V9GY48 417 aaPredicted RBP17.05■□□□□ 0.32
RPUSD1-204ENST00000563560 COL6A3P12111 3177 aa17.05■□□□□ 0.32
RPUSD1-204ENST00000563560 CHD9Q3L8U1 2897 aa17.04■□□□□ 0.32
RPUSD1-204ENST00000563560 STAM2O75886 525 aa17.04■□□□□ 0.32
RPUSD1-204ENST00000563560 GH1P01241 217 aa17.04■□□□□ 0.32
RPUSD1-204ENST00000563560 MYCLP12524 364 aaPredicted RBP17.04■□□□□ 0.32
RPUSD1-204ENST00000563560 UBA1P22314 1058 aaKnown RBP17.04■□□□□ 0.32
RPUSD1-204ENST00000563560 CCND2P30279 289 aa17.04■□□□□ 0.32
RPUSD1-204ENST00000563560 METAP2P50579 478 aaKnown RBP eCLIP17.04■□□□□ 0.32
RPUSD1-204ENST00000563560 PFKFB3Q16875 520 aaPredicted RBP17.04■□□□□ 0.32
RPUSD1-204ENST00000563560 TEX2Q8IWB9 1127 aa17.04■□□□□ 0.32
RPUSD1-204ENST00000563560 TDHQ8IZJ6 230 aa17.04■□□□□ 0.32
RPUSD1-204ENST00000563560 AFG1LQ8WV93 481 aa17.04■□□□□ 0.32
RPUSD1-204ENST00000563560 BADQ92934 168 aa17.04■□□□□ 0.32
RPUSD1-204ENST00000563560 UPF3BQ9BZI7 483 aaKnown RBP17.04■□□□□ 0.32
RPUSD1-204ENST00000563560 ALDH8A1Q9H2A2 487 aaPredicted RBP17.04■□□□□ 0.32
RPUSD1-204ENST00000563560 RIC8AQ9NPQ8 531 aa17.04■□□□□ 0.32
RPUSD1-204ENST00000563560 WDR81Q562E7 1941 aa17.04■□□□□ 0.32
RPUSD1-204ENST00000563560 SPATA31C2B4DYI2 1134 aa17.03■□□□□ 0.32
RPUSD1-204ENST00000563560 hCG_1984214I3L0E3 225 aa17.03■□□□□ 0.32
RPUSD1-204ENST00000563560 ZEB2O60315 1214 aa17.03■□□□□ 0.32
RPUSD1-204ENST00000563560 TGFB3P10600 412 aa17.03■□□□□ 0.32
RPUSD1-204ENST00000563560 ANAPC15P60006 121 aa17.03■□□□□ 0.32
RPUSD1-204ENST00000563560 LRIT3Q3SXY7 679 aa17.03■□□□□ 0.32
RPUSD1-204ENST00000563560 CELF3Q5SZQ8 465 aaKnown RBP17.03■□□□□ 0.32
RPUSD1-204ENST00000563560 HEATR3Q7Z4Q2 680 aa17.03■□□□□ 0.32
RPUSD1-204ENST00000563560 ZNF713Q8N859 430 aaPredicted RBP17.03■□□□□ 0.32
RPUSD1-204ENST00000563560 PPTC7Q8NI37 304 aa17.03■□□□□ 0.32
RPUSD1-204ENST00000563560 CRYGNQ8WXF5 182 aa17.03■□□□□ 0.32
RPUSD1-204ENST00000563560 MTG1Q9BT17 334 aaPredicted RBP17.03■□□□□ 0.32
RPUSD1-204ENST00000563560 TELO2Q9Y4R8 837 aa17.03■□□□□ 0.32
RPUSD1-204ENST00000563560 DCDC2CA8MYV0 355 aa17.02■□□□□ 0.32
RPUSD1-204ENST00000563560 HAS3O00219 553 aa17.02■□□□□ 0.32
RPUSD1-204ENST00000563560 PRPF3O43395 683 aaKnown RBP17.02■□□□□ 0.32
RPUSD1-204ENST00000563560 B4GALT4O60513 344 aa17.02■□□□□ 0.32
RPUSD1-204ENST00000563560 KPNA6O60684 536 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms