RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 TBC1D5Q92609 795 aa21.83■■□□□ 1.09
NME3-204ENST00000563498 EMID1Q96A84 441 aaPredicted RBP21.83■■□□□ 1.09
NME3-204ENST00000563498 RMDN3Q96TC7 470 aa21.83■■□□□ 1.09
NME3-204ENST00000563498 C1QTNF1Q9BXJ1 281 aa21.83■■□□□ 1.09
NME3-204ENST00000563498 LAMA4Q16363 1823 aa21.83■■□□□ 1.08
NME3-204ENST00000563498 TET1Q8NFU7 2136 aa21.82■■□□□ 1.08
NME3-204ENST00000563498 SDSP20132 328 aa21.82■■□□□ 1.08
NME3-204ENST00000563498 CHMP4BP1P59074 171 aa21.82■■□□□ 1.08
NME3-204ENST00000563498 WDR5P61964 334 aaKnown RBP21.82■■□□□ 1.08
NME3-204ENST00000563498 GPNMBQ14956 572 aa21.82■■□□□ 1.08
NME3-204ENST00000563498 DGKDQ16760 1214 aa21.82■■□□□ 1.08
NME3-204ENST00000563498 LRRC8DQ7L1W4 858 aa21.82■■□□□ 1.08
NME3-204ENST00000563498 RILPL2Q969X0 211 aa21.82■■□□□ 1.08
NME3-204ENST00000563498 CRBNQ96SW2 442 aa21.82■■□□□ 1.08
NME3-204ENST00000563498 KAT14Q9H8E8 782 aa21.82■■□□□ 1.08
NME3-204ENST00000563498 DDX41Q9UJV9 622 aaKnown RBP21.82■■□□□ 1.08
NME3-204ENST00000563498 MRPL11Q9Y3B7 192 aaKnown RBP21.82■■□□□ 1.08
NME3-204ENST00000563498 KIAA1217Q5T5P2 1943 aa21.82■■□□□ 1.08
NME3-204ENST00000563498 KDM4AO75164 1064 aa21.81■■□□□ 1.08
NME3-204ENST00000563498 EIF3JO75822 258 aaKnown RBP21.81■■□□□ 1.08
NME3-204ENST00000563498 CXCL10P02778 98 aa21.81■■□□□ 1.08
NME3-204ENST00000563498 GRB10Q13322 594 aa21.81■■□□□ 1.08
NME3-204ENST00000563498 CNKSR3Q6P9H4 555 aa21.81■■□□□ 1.08
NME3-204ENST00000563498 DHX38Q92620 1227 aaKnown RBP21.81■■□□□ 1.08
NME3-204ENST00000563498 ZSCAN10Q96SZ4 725 aaPredicted RBP21.81■■□□□ 1.08
NME3-204ENST00000563498 KATNAL1Q9BW62 490 aa21.81■■□□□ 1.08
NME3-204ENST00000563498 GTF2IRD1Q9UHL9 959 aa21.81■■□□□ 1.08
NME3-204ENST00000563498 TCF20Q9UGU0 1960 aaKnown RBP21.81■■□□□ 1.08
NME3-204ENST00000563498 PTPRSQ13332 1948 aa21.8■■□□□ 1.08
NME3-204ENST00000563498 TRIP12Q14669 1992 aaPredicted RBP21.8■■□□□ 1.08
NME3-204ENST00000563498 LPXNO60711 386 aa21.8■■□□□ 1.08
NME3-204ENST00000563498 QRICH1Q2TAL8 776 aa21.8■■□□□ 1.08
NME3-204ENST00000563498 KRT40Q6A162 431 aa21.8■■□□□ 1.08
NME3-204ENST00000563498 CHST3Q7LGC8 479 aa21.8■■□□□ 1.08
NME3-204ENST00000563498 FBXO11Q86XK2 927 aa21.8■■□□□ 1.08
NME3-204ENST00000563498 C7orf31Q8N865 590 aa21.8■■□□□ 1.08
NME3-204ENST00000563498 HLA-CQ95604 372 aa21.8■■□□□ 1.08
NME3-204ENST00000563498 LNPKQ9C0E8 428 aa21.8■■□□□ 1.08
NME3-204ENST00000563498 LMCD1Q9NZU5 365 aa21.8■■□□□ 1.08
NME3-204ENST00000563498 ABHD14A-ACY1A0A1B0GW23 586 aa21.79■■□□□ 1.08
NME3-204ENST00000563498 F2P00734 622 aa21.79■■□□□ 1.08
NME3-204ENST00000563498 CKBP12277 381 aa21.79■■□□□ 1.08
NME3-204ENST00000563498 LAMC2Q13753 1193 aa21.79■■□□□ 1.08
NME3-204ENST00000563498 ARHGEF16Q5VV41 709 aa21.79■■□□□ 1.08
NME3-204ENST00000563498 ENAHQ8N8S7 591 aaPredicted RBP21.79■■□□□ 1.08
NME3-204ENST00000563498 PPTC7Q8NI37 304 aa21.79■■□□□ 1.08
NME3-204ENST00000563498 JMJD4Q9H9V9 463 aa21.79■■□□□ 1.08
NME3-204ENST00000563498 NBNO60934 754 aa21.78■■□□□ 1.08
NME3-204ENST00000563498 EFCAB14O75071 495 aa21.78■■□□□ 1.08
NME3-204ENST00000563498 NR3C2P08235 984 aa21.78■■□□□ 1.08
NME3-204ENST00000563498 PARP1P09874 1014 aaKnown RBP21.78■■□□□ 1.08
NME3-204ENST00000563498 PSEN2P49810 448 aa21.78■■□□□ 1.08
NME3-204ENST00000563498 GHRHRQ02643 423 aa21.78■■□□□ 1.08
NME3-204ENST00000563498 PTK7Q13308 1070 aa21.78■■□□□ 1.08
NME3-204ENST00000563498 AAMPQ13685 434 aa21.78■■□□□ 1.08
NME3-204ENST00000563498 SMC5Q8IY18 1101 aa21.78■■□□□ 1.08
NME3-204ENST00000563498 ZBED2Q9BTP6 218 aa21.78■■□□□ 1.08
NME3-204ENST00000563498 OSBPL3Q9H4L5 887 aa21.78■■□□□ 1.08
NME3-204ENST00000563498 PXMP2Q9NR77 195 aa21.78■■□□□ 1.08
NME3-204ENST00000563498 HDAC6Q9UBN7 1215 aa21.78■■□□□ 1.08
NME3-204ENST00000563498 RAPGEFL1Q9UHV5 662 aa21.78■■□□□ 1.08
NME3-204ENST00000563498 MRVI1Q9Y6F6 885 aa21.78■■□□□ 1.08
NME3-204ENST00000563498 COL4A4P53420 1690 aaPredicted RBP21.78■■□□□ 1.08
NME3-204ENST00000563498 LCHNA4D1U4 455 aa21.77■■□□□ 1.08
NME3-204ENST00000563498 B4E1Z4 1266 aa21.77■■□□□ 1.08
NME3-204ENST00000563498 HAS3O00219 553 aa21.77■■□□□ 1.08
NME3-204ENST00000563498 DHX16O60231 1041 aaKnown RBP21.77■■□□□ 1.08
NME3-204ENST00000563498 GJB5O95377 273 aa21.77■■□□□ 1.08
NME3-204ENST00000563498 HOXD8P13378 290 aaPredicted RBP21.77■■□□□ 1.08
NME3-204ENST00000563498 EIF2AK2P19525 551 aaKnown RBP21.77■■□□□ 1.08
NME3-204ENST00000563498 HSD17B4P51659 736 aa21.77■■□□□ 1.08
NME3-204ENST00000563498 MFSD10Q14728 455 aa21.77■■□□□ 1.08
NME3-204ENST00000563498 MAP3K20Q9NYL2 800 aaKnown RBP21.77■■□□□ 1.08
NME3-204ENST00000563498 ZSWIM5Q9P217 1185 aa21.77■■□□□ 1.08
NME3-204ENST00000563498 DEFB103AP81534 67 aa21.76■■□□□ 1.07
NME3-204ENST00000563498 KIAA0753Q2KHM9 967 aa21.76■■□□□ 1.07
NME3-204ENST00000563498 KCNV1Q6PIU1 500 aa21.76■■□□□ 1.07
NME3-204ENST00000563498 CWC27Q6UX04 472 aaKnown RBP21.76■■□□□ 1.07
NME3-204ENST00000563498 SPRED2Q7Z698 418 aa21.76■■□□□ 1.07
NME3-204ENST00000563498 RAD9AQ99638 391 aa21.76■■□□□ 1.07
NME3-204ENST00000563498 DSCC1Q9BVC3 393 aa21.76■■□□□ 1.07
NME3-204ENST00000563498 AMNQ9BXJ7 453 aa21.76■■□□□ 1.07
NME3-204ENST00000563498 KRT23Q9C075 422 aa21.76■■□□□ 1.07
NME3-204ENST00000563498 DIAPH3Q9NSV4 1193 aa21.76■■□□□ 1.07
NME3-204ENST00000563498 MYH6P13533 1939 aa21.75■■□□□ 1.07
NME3-204ENST00000563498 HIP1O00291 1037 aa21.75■■□□□ 1.07
NME3-204ENST00000563498 OPLAHO14841 1288 aa21.75■■□□□ 1.07
NME3-204ENST00000563498 PPFIA4O75335 1185 aa21.75■■□□□ 1.07
NME3-204ENST00000563498 CFBP00751 764 aa21.75■■□□□ 1.07
NME3-204ENST00000563498 PLA2G5P39877 138 aa21.75■■□□□ 1.07
NME3-204ENST00000563498 IKBKEQ14164 716 aa21.75■■□□□ 1.07
NME3-204ENST00000563498 IMMTQ16891 758 aaKnown RBP21.75■■□□□ 1.07
NME3-204ENST00000563498 TRIM71Q2Q1W2 868 aaKnown RBP21.75■■□□□ 1.07
NME3-204ENST00000563498 TRAF7Q6Q0C0 670 aa21.75■■□□□ 1.07
NME3-204ENST00000563498 TMCO2Q7Z6W1 182 aaPredicted RBP21.75■■□□□ 1.07
NME3-204ENST00000563498 PLEKHM2Q8IWE5 1019 aa21.75■■□□□ 1.07
NME3-204ENST00000563498 DHX37Q8IY37 1157 aaKnown RBP21.75■■□□□ 1.07
NME3-204ENST00000563498 SAMD3Q8N6K7 520 aa21.75■■□□□ 1.07
NME3-204ENST00000563498 ALG1Q9BT22 464 aa21.75■■□□□ 1.07
NME3-204ENST00000563498 CNNM2Q9H8M5 875 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms