RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 PTPRZ1P23471 2315 aaPredicted RBP9.21□□□□□ -0.93
HERPUD1-206ENST00000563343 GSG1L2A8MUP6 293 aa9.21□□□□□ -0.94
HERPUD1-206ENST00000563343 NKRFO15226 690 aaKnown RBP eCLIP9.21□□□□□ -0.94
HERPUD1-206ENST00000563343 EFCAB14O75071 495 aa9.21□□□□□ -0.94
HERPUD1-206ENST00000563343 TBX10O75333 385 aa9.21□□□□□ -0.94
HERPUD1-206ENST00000563343 LGR5O75473 907 aa9.21□□□□□ -0.94
HERPUD1-206ENST00000563343 ARIH2O95376 493 aa9.21□□□□□ -0.94
HERPUD1-206ENST00000563343 TTLL1O95922 423 aa9.21□□□□□ -0.94
HERPUD1-206ENST00000563343 LINC00271P0C7V0 271 aa9.21□□□□□ -0.94
HERPUD1-206ENST00000563343 EDNRBP24530 442 aa9.21□□□□□ -0.94
HERPUD1-206ENST00000563343 HYAL1Q12794 435 aa9.21□□□□□ -0.94
HERPUD1-206ENST00000563343 GPM6BQ13491 265 aa9.21□□□□□ -0.94
HERPUD1-206ENST00000563343 BAATQ14032 418 aaPredicted RBP9.21□□□□□ -0.94
HERPUD1-206ENST00000563343 IKBKEQ14164 716 aa9.21□□□□□ -0.94
HERPUD1-206ENST00000563343 CEP85Q6P2H3 762 aa9.21□□□□□ -0.94
HERPUD1-206ENST00000563343 RASGRP2Q7LDG7 609 aa9.21□□□□□ -0.94
HERPUD1-206ENST00000563343 ERC1Q8IUD2 1116 aa9.21□□□□□ -0.94
HERPUD1-206ENST00000563343 FBXL6Q8N531 539 aa9.21□□□□□ -0.94
HERPUD1-206ENST00000563343 RHPN1Q8TCX5 695 aa9.21□□□□□ -0.94
HERPUD1-206ENST00000563343 MKNK2Q9HBH9 465 aa9.21□□□□□ -0.94
HERPUD1-206ENST00000563343 PRR12Q9ULL5 1215 aa9.21□□□□□ -0.94
HERPUD1-206ENST00000563343 NOD1Q9Y239 953 aa9.21□□□□□ -0.94
HERPUD1-206ENST00000563343 NFIBO00712 420 aa9.2□□□□□ -0.94
HERPUD1-206ENST00000563343 ZXDAP98168 799 aa9.2□□□□□ -0.94
HERPUD1-206ENST00000563343 SMAD4Q13485 552 aaKnown RBP9.2□□□□□ -0.94
HERPUD1-206ENST00000563343 PPP2R5BQ15173 497 aa9.2□□□□□ -0.94
HERPUD1-206ENST00000563343 CLUL1Q15846 466 aa9.2□□□□□ -0.94
HERPUD1-206ENST00000563343 CCDC62Q6P9F0 684 aa9.2□□□□□ -0.94
HERPUD1-206ENST00000563343 NSMFQ6X4W1 530 aa9.2□□□□□ -0.94
HERPUD1-206ENST00000563343 ASCL5Q7RTU5 278 aa9.2□□□□□ -0.94
HERPUD1-206ENST00000563343 ERMP1Q7Z2K6 904 aa9.2□□□□□ -0.94
HERPUD1-206ENST00000563343 FBXO11Q86XK2 927 aa9.2□□□□□ -0.94
HERPUD1-206ENST00000563343 CHURC1Q8WUH1 139 aa9.2□□□□□ -0.94
HERPUD1-206ENST00000563343 FRAT1Q92837 279 aaPredicted RBP9.2□□□□□ -0.94
HERPUD1-206ENST00000563343 FAM212AQ96EL1 285 aa9.2□□□□□ -0.94
HERPUD1-206ENST00000563343 ASIC4Q96FT7 647 aa9.2□□□□□ -0.94
HERPUD1-206ENST00000563343 DDRGK1Q96HY6 314 aa9.2□□□□□ -0.94
HERPUD1-206ENST00000563343 STRBPQ96SI9 672 aaKnown RBP9.2□□□□□ -0.94
HERPUD1-206ENST00000563343 EPB41L4AQ9HCS5 686 aaPredicted RBP9.2□□□□□ -0.94
HERPUD1-206ENST00000563343 ADD3Q9UEY8 706 aaKnown RBP9.2□□□□□ -0.94
HERPUD1-206ENST00000563343 GTF2IRD1Q9UHL9 959 aa9.2□□□□□ -0.94
HERPUD1-206ENST00000563343 RAD50Q92878 1312 aa9.2□□□□□ -0.94
HERPUD1-206ENST00000563343 GVINP1Q7Z2Y8 2422 aa9.19□□□□□ -0.94
HERPUD1-206ENST00000563343 MINDY4BA8MYZ0 360 aa9.19□□□□□ -0.94
HERPUD1-206ENST00000563343 LOC730098B7Z3J9 87 aa9.19□□□□□ -0.94
HERPUD1-206ENST00000563343 STXBP3O00186 592 aa9.19□□□□□ -0.94
HERPUD1-206ENST00000563343 PRDM1O75626 825 aa9.19□□□□□ -0.94
HERPUD1-206ENST00000563343 ICAM1P05362 532 aa9.19□□□□□ -0.94
HERPUD1-206ENST00000563343 MMP3P08254 477 aa9.19□□□□□ -0.94
HERPUD1-206ENST00000563343 GTF2F1P35269 517 aaKnown RBP eCLIP9.19□□□□□ -0.94
HERPUD1-206ENST00000563343 HIC1Q14526 733 aa9.19□□□□□ -0.94
HERPUD1-206ENST00000563343 CBX2Q14781 532 aaPredicted RBP9.19□□□□□ -0.94
HERPUD1-206ENST00000563343 BRDTQ58F21 947 aaPredicted RBP9.19□□□□□ -0.94
HERPUD1-206ENST00000563343 ZNF618Q5T7W0 954 aa9.19□□□□□ -0.94
HERPUD1-206ENST00000563343 GIMAP6Q6P9H5 292 aa9.19□□□□□ -0.94
HERPUD1-206ENST00000563343 SLC30A10Q6XR72 485 aa9.19□□□□□ -0.94
HERPUD1-206ENST00000563343 EP400NLQ6ZTU2 488 aa9.19□□□□□ -0.94
HERPUD1-206ENST00000563343 KCTD1Q719H9 257 aa9.19□□□□□ -0.94
HERPUD1-206ENST00000563343 TMEM192Q8IY95 271 aa9.19□□□□□ -0.94
HERPUD1-206ENST00000563343 MYOCDQ8IZQ8 938 aa9.19□□□□□ -0.94
HERPUD1-206ENST00000563343 ZNF579Q8NAF0 562 aaKnown RBP9.19□□□□□ -0.94
HERPUD1-206ENST00000563343 DBF4BQ8NFT6 615 aa9.19□□□□□ -0.94
HERPUD1-206ENST00000563343 NEDD1Q8NHV4 660 aa9.19□□□□□ -0.94
HERPUD1-206ENST00000563343 SCFD2Q8WU76 684 aa9.19□□□□□ -0.94
HERPUD1-206ENST00000563343 MSLNLQ96KJ4 702 aa9.19□□□□□ -0.94
HERPUD1-206ENST00000563343 CRBNQ96SW2 442 aa9.19□□□□□ -0.94
HERPUD1-206ENST00000563343 RANBP17Q9H2T7 1088 aaKnown RBP9.19□□□□□ -0.94
HERPUD1-206ENST00000563343 BOLA2Q9H3K6 86 aa9.19□□□□□ -0.94
HERPUD1-206ENST00000563343 HDAC6Q9UBN7 1215 aa9.19□□□□□ -0.94
HERPUD1-206ENST00000563343 CCPG1Q9ULG6 757 aa9.19□□□□□ -0.94
HERPUD1-206ENST00000563343 DOCK5Q9H7D0 1870 aa9.19□□□□□ -0.94
HERPUD1-206ENST00000563343 LOXHD1Q8IVV2 1947 aa9.19□□□□□ -0.94
HERPUD1-206ENST00000563343 PRR23AA6NEV1 266 aa9.18□□□□□ -0.94
HERPUD1-206ENST00000563343 C5orf67F2Z3F1 127 aa9.18□□□□□ -0.94
HERPUD1-206ENST00000563343 HAS3O00219 553 aa9.18□□□□□ -0.94
HERPUD1-206ENST00000563343 LINC01565O15544 149 aa9.18□□□□□ -0.94
HERPUD1-206ENST00000563343 NCK2O43639 380 aa9.18□□□□□ -0.94
HERPUD1-206ENST00000563343 EYA4O95677 639 aa9.18□□□□□ -0.94
HERPUD1-206ENST00000563343 AMHP03971 560 aa9.18□□□□□ -0.94
HERPUD1-206ENST00000563343 RLBP1P12271 317 aa9.18□□□□□ -0.94
HERPUD1-206ENST00000563343 ATP5JP18859 108 aa9.18□□□□□ -0.94
HERPUD1-206ENST00000563343 MCCP23508 829 aa9.18□□□□□ -0.94
HERPUD1-206ENST00000563343 AVPR2P30518 371 aa9.18□□□□□ -0.94
HERPUD1-206ENST00000563343 TTC3P53804 2025 aa9.18□□□□□ -0.94
HERPUD1-206ENST00000563343 ARHGAP1Q07960 439 aa9.18□□□□□ -0.94
HERPUD1-206ENST00000563343 PTK7Q13308 1070 aa9.18□□□□□ -0.94
HERPUD1-206ENST00000563343 PLEKHG4Q58EX7 1191 aa9.18□□□□□ -0.94
HERPUD1-206ENST00000563343 RCSD1Q6JBY9 416 aa9.18□□□□□ -0.94
HERPUD1-206ENST00000563343 SUGP1Q8IWZ8 645 aaKnown RBP9.18□□□□□ -0.94
HERPUD1-206ENST00000563343 CLEC4DQ8WXI8 215 aa9.18□□□□□ -0.94
HERPUD1-206ENST00000563343 TOP1MTQ969P6 601 aa9.18□□□□□ -0.94
HERPUD1-206ENST00000563343 CHMP4CQ96CF2 233 aa9.18□□□□□ -0.94
HERPUD1-206ENST00000563343 HAUS7Q99871 368 aa9.18□□□□□ -0.94
HERPUD1-206ENST00000563343 OSBPL7Q9BZF2 842 aa9.18□□□□□ -0.94
HERPUD1-206ENST00000563343 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.18□□□□□ -0.942e-6■□□□□ 10.1
HERPUD1-206ENST00000563343 MYO10Q9HD67 2058 aa9.18□□□□□ -0.94
HERPUD1-206ENST00000563343 CACNA1BQ00975 2339 aa9.17□□□□□ -0.94
HERPUD1-206ENST00000563343 DNAH14Q0VDD8 3507 aa9.17□□□□□ -0.94
HERPUD1-206ENST00000563343 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.17□□□□□ -0.94
HERPUD1-206ENST00000563343 GRM6O15303 877 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms