RNA–Protein interactions for RNA: ENST00000563240.1

LPCAT4-204, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 2

Gene LPCAT4, Length 939 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-204ENST00000563240 SLC12A7Q9Y666 1083 aa17.65■□□□□ 0.42
LPCAT4-204ENST00000563240 hCG_1642624A0A1W2PR95 340 aa17.64■□□□□ 0.41
LPCAT4-204ENST00000563240 MMP3P08254 477 aa17.64■□□□□ 0.41
LPCAT4-204ENST00000563240 SMAD3P84022 425 aaKnown RBP17.64■□□□□ 0.41
LPCAT4-204ENST00000563240 GHRHRQ02643 423 aa17.64■□□□□ 0.41
LPCAT4-204ENST00000563240 PGM5Q15124 567 aa17.64■□□□□ 0.41
LPCAT4-204ENST00000563240 TMEM240Q5SV17 173 aa17.64■□□□□ 0.41
LPCAT4-204ENST00000563240 RNF20Q5VTR2 975 aa17.64■□□□□ 0.41
LPCAT4-204ENST00000563240 FAM109BQ6ICB4 259 aaPredicted RBP17.64■□□□□ 0.41
LPCAT4-204ENST00000563240 SRBD1Q8N5C6 995 aaKnown RBP17.64■□□□□ 0.41
LPCAT4-204ENST00000563240 SCLYQ96I15 445 aa17.64■□□□□ 0.41
LPCAT4-204ENST00000563240 TCEANC2Q96MN5 208 aa17.64■□□□□ 0.41
LPCAT4-204ENST00000563240 NEK1Q96PY6 1258 aa17.64■□□□□ 0.41
LPCAT4-204ENST00000563240 WNT8AQ9H1J5 351 aa17.64■□□□□ 0.41
LPCAT4-204ENST00000563240 MAP3K20Q9NYL2 800 aaKnown RBP17.64■□□□□ 0.41
LPCAT4-204ENST00000563240 BAZ2BQ9UIF8 2168 aaKnown RBP17.64■□□□□ 0.41
LPCAT4-204ENST00000563240 MYH6P13533 1939 aa17.63■□□□□ 0.41
LPCAT4-204ENST00000563240 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.63■□□□□ 0.41
LPCAT4-204ENST00000563240 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.63■□□□□ 0.41
LPCAT4-204ENST00000563240 GRXCR1A8MXD5 290 aa17.63■□□□□ 0.41
LPCAT4-204ENST00000563240 SUPT20HL2P0C7V6 817 aa17.63■□□□□ 0.41
LPCAT4-204ENST00000563240 GNAQP50148 359 aa17.63■□□□□ 0.41
LPCAT4-204ENST00000563240 VSIG10LQ86VR7 867 aa17.63■□□□□ 0.41
LPCAT4-204ENST00000563240 DHX37Q8IY37 1157 aaKnown RBP17.63■□□□□ 0.41
LPCAT4-204ENST00000563240 RASEFQ8IZ41 740 aa17.63■□□□□ 0.41
LPCAT4-204ENST00000563240 GUCD1Q96NT3 240 aa17.63■□□□□ 0.41
LPCAT4-204ENST00000563240 MAP3K14Q99558 947 aa17.63■□□□□ 0.41
LPCAT4-204ENST00000563240 MTA3Q9BTC8 594 aa17.63■□□□□ 0.41
LPCAT4-204ENST00000563240 SPZ1Q9BXG8 430 aa17.63■□□□□ 0.41
LPCAT4-204ENST00000563240 SEMA6BQ9H3T3 888 aa17.63■□□□□ 0.41
LPCAT4-204ENST00000563240 IL23AQ9NPF7 189 aa17.63■□□□□ 0.41
LPCAT4-204ENST00000563240 SEC63Q9UGP8 760 aaKnown RBP17.63■□□□□ 0.41
LPCAT4-204ENST00000563240 STXBP5LQ9Y2K9 1186 aa17.63■□□□□ 0.41
LPCAT4-204ENST00000563240 RGS20O76081 388 aa17.62■□□□□ 0.41
LPCAT4-204ENST00000563240 FGBP02675 491 aa17.62■□□□□ 0.41
LPCAT4-204ENST00000563240 CASTP20810 708 aaKnown RBP17.62■□□□□ 0.41
LPCAT4-204ENST00000563240 CCND2P30279 289 aa17.62■□□□□ 0.41
LPCAT4-204ENST00000563240 LIFRP42702 1097 aa17.62■□□□□ 0.41
LPCAT4-204ENST00000563240 USP17L6PQ6QN14 398 aa17.62■□□□□ 0.41
LPCAT4-204ENST00000563240 OTOP2Q7RTS6 562 aa17.62■□□□□ 0.41
LPCAT4-204ENST00000563240 MICU3Q86XE3 530 aa17.62■□□□□ 0.41
LPCAT4-204ENST00000563240 SAMD3Q8N6K7 520 aa17.62■□□□□ 0.41
LPCAT4-204ENST00000563240 SMARCC2Q8TAQ2 1214 aa17.62■□□□□ 0.41
LPCAT4-204ENST00000563240 GPKOWQ92917 476 aaPredicted RBP eCLIP17.62■□□□□ 0.41
LPCAT4-204ENST00000563240 LZTS2Q9BRK4 669 aa17.62■□□□□ 0.41
LPCAT4-204ENST00000563240 RTEL1Q9NZ71 1219 aa17.62■□□□□ 0.41
LPCAT4-204ENST00000563240 NOD1Q9Y239 953 aa17.62■□□□□ 0.41
LPCAT4-204ENST00000563240 CALM1P0DP23 149 aa17.61■□□□□ 0.41
LPCAT4-204ENST00000563240 CALM2P0DP24 149 aa17.61■□□□□ 0.41
LPCAT4-204ENST00000563240 CALM3P0DP25 149 aa17.61■□□□□ 0.41
LPCAT4-204ENST00000563240 LAMC2Q13753 1193 aa17.61■□□□□ 0.41
LPCAT4-204ENST00000563240 ADCK5Q3MIX3 580 aa17.61■□□□□ 0.41
LPCAT4-204ENST00000563240 NFRKBQ6P4R8 1299 aa17.61■□□□□ 0.41
LPCAT4-204ENST00000563240 PSRC1Q6PGN9 363 aaPredicted RBP17.61■□□□□ 0.41
LPCAT4-204ENST00000563240 DEFB128Q7Z7B8 93 aa17.61■□□□□ 0.41
LPCAT4-204ENST00000563240 FANCBQ8NB91 859 aa17.61■□□□□ 0.41
LPCAT4-204ENST00000563240 SLC17A8Q8NDX2 589 aa17.61■□□□□ 0.41
LPCAT4-204ENST00000563240 KAT2BQ92831 832 aa17.61■□□□□ 0.41
LPCAT4-204ENST00000563240 CUL5Q93034 780 aa17.61■□□□□ 0.41
LPCAT4-204ENST00000563240 ALG1Q9BT22 464 aa17.61■□□□□ 0.41
LPCAT4-204ENST00000563240 TTYH1Q9H313 450 aaPredicted RBP17.61■□□□□ 0.41
LPCAT4-204ENST00000563240 CXXC1Q9P0U4 656 aaPredicted RBP17.61■□□□□ 0.41
LPCAT4-204ENST00000563240 ZNF286BP0CG31 522 aa17.6■□□□□ 0.41
LPCAT4-204ENST00000563240 SMARCA1P28370 1054 aa17.6■□□□□ 0.41
LPCAT4-204ENST00000563240 SP2Q02086 613 aa17.6■□□□□ 0.41
LPCAT4-204ENST00000563240 DGKDQ16760 1214 aa17.6■□□□□ 0.41
LPCAT4-204ENST00000563240 SYNE3Q6ZMZ3 975 aa17.6■□□□□ 0.41
LPCAT4-204ENST00000563240 SPATA33Q96N06 139 aa17.6■□□□□ 0.41
LPCAT4-204ENST00000563240 CDX2Q99626 313 aaPredicted RBP17.6■□□□□ 0.41
LPCAT4-204ENST00000563240 GGPS1O95749 300 aa17.59■□□□□ 0.41
LPCAT4-204ENST00000563240 DNAJB2P25686 324 aa17.59■□□□□ 0.41
LPCAT4-204ENST00000563240 PBX2P40425 430 aa17.59■□□□□ 0.41
LPCAT4-204ENST00000563240 EXOSC10Q01780 885 aaKnown RBP17.59■□□□□ 0.41
LPCAT4-204ENST00000563240 PTGISQ16647 500 aa17.59■□□□□ 0.41
LPCAT4-204ENST00000563240 CELF3Q5SZQ8 465 aaKnown RBP17.59■□□□□ 0.41
LPCAT4-204ENST00000563240 MYSM1Q5VVJ2 828 aa17.59■□□□□ 0.41
LPCAT4-204ENST00000563240 KCNV1Q6PIU1 500 aa17.59■□□□□ 0.41
LPCAT4-204ENST00000563240 DHX32Q7L7V1 743 aaKnown RBP17.59■□□□□ 0.41
LPCAT4-204ENST00000563240 RPUSD2Q8IZ73 545 aaKnown RBP17.59■□□□□ 0.41
LPCAT4-204ENST00000563240 RETREG2Q8NC44 543 aa17.59■□□□□ 0.41
LPCAT4-204ENST00000563240 BCAS3Q9H6U6 928 aa17.59■□□□□ 0.41
LPCAT4-204ENST00000563240 MLXIPQ9HAP2 919 aa17.59■□□□□ 0.41
LPCAT4-204ENST00000563240 NAP1L2Q9ULW6 460 aaPredicted RBP17.59■□□□□ 0.41
LPCAT4-204ENST00000563240 UBA1P22314 1058 aaKnown RBP17.58■□□□□ 0.4
LPCAT4-204ENST00000563240 PSEN2P49810 448 aa17.58■□□□□ 0.4
LPCAT4-204ENST00000563240 MRPS9P82933 396 aaKnown RBP17.58■□□□□ 0.4
LPCAT4-204ENST00000563240 PTPN11Q06124 597 aaPredicted RBP17.58■□□□□ 0.4
LPCAT4-204ENST00000563240 HSDL1Q3SXM5 330 aa17.58■□□□□ 0.4
LPCAT4-204ENST00000563240 RASIP1Q5U651 963 aa17.58■□□□□ 0.4
LPCAT4-204ENST00000563240 GDF6Q6KF10 455 aaPredicted RBP17.58■□□□□ 0.4
LPCAT4-204ENST00000563240 TMTC3Q6ZXV5 915 aa17.58■□□□□ 0.4
LPCAT4-204ENST00000563240 SGMS1Q86VZ5 419 aa17.58■□□□□ 0.4
LPCAT4-204ENST00000563240 C7orf31Q8N865 590 aa17.58■□□□□ 0.4
LPCAT4-204ENST00000563240 PPTC7Q8NI37 304 aa17.58■□□□□ 0.4
LPCAT4-204ENST00000563240 MYLIPQ8WY64 445 aa17.58■□□□□ 0.4
LPCAT4-204ENST00000563240 HERVK_113Q902F9 699 aa17.58■□□□□ 0.4
LPCAT4-204ENST00000563240 EMID1Q96A84 441 aaPredicted RBP17.58■□□□□ 0.4
LPCAT4-204ENST00000563240 PSTPIP2Q9H939 334 aa17.58■□□□□ 0.4
LPCAT4-204ENST00000563240 BRPF3Q9ULD4 1205 aa17.58■□□□□ 0.4
LPCAT4-204ENST00000563240 ZBBXA8MT70 800 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 151.7 ms