RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 SRRTQ9BXP5 876 aaKnown RBP21.4■■□□□ 1.02
SMPD3-203ENST00000563226 SLC39A2Q9NP94 309 aa21.4■■□□□ 1.02
SMPD3-203ENST00000563226 TNIP1Q15025 636 aa21.39■■□□□ 1.01
SMPD3-203ENST00000563226 R3HDM1Q15032 1099 aaKnown RBP21.39■■□□□ 1.01
SMPD3-203ENST00000563226 UNC13DQ70J99 1090 aa21.39■■□□□ 1.01
SMPD3-203ENST00000563226 EEF2KMTQ96G04 330 aa21.39■■□□□ 1.01
SMPD3-203ENST00000563226 TEPSINQ96N21 525 aa21.39■■□□□ 1.01
SMPD3-203ENST00000563226 RANBP17Q9H2T7 1088 aaKnown RBP21.39■■□□□ 1.01
SMPD3-203ENST00000563226 POTEB3A0JP26 581 aa21.38■■□□□ 1.01
SMPD3-203ENST00000563226 PHF20L1A8MW92 1017 aa21.38■■□□□ 1.01
SMPD3-203ENST00000563226 POTECB2RU33 542 aa21.38■■□□□ 1.01
SMPD3-203ENST00000563226 FOSP01100 380 aaPredicted RBP21.38■■□□□ 1.01
SMPD3-203ENST00000563226 HYIQ5T013 277 aa21.38■■□□□ 1.01
SMPD3-203ENST00000563226 ANKRD40Q6AI12 368 aa21.38■■□□□ 1.01
SMPD3-203ENST00000563226 POTEBQ6S5H4 581 aa21.38■■□□□ 1.01
SMPD3-203ENST00000563226 FCHSD1Q86WN1 690 aa21.38■■□□□ 1.01
SMPD3-203ENST00000563226 CPLX3Q8WVH0 158 aa21.38■■□□□ 1.01
SMPD3-203ENST00000563226 P2RX5Q93086 422 aa21.38■■□□□ 1.01
SMPD3-203ENST00000563226 AKR1B15C9JRZ8 316 aaPredicted RBP21.38■■□□□ 1.01
SMPD3-203ENST00000563226 CCNE1P24864 410 aa21.38■■□□□ 1.01
SMPD3-203ENST00000563226 SPIRE1Q08AE8 756 aa21.38■■□□□ 1.01
SMPD3-203ENST00000563226 Q4G0T1 1027 aa21.38■■□□□ 1.01
SMPD3-203ENST00000563226 CNNM4Q6P4Q7 775 aa21.38■■□□□ 1.01
SMPD3-203ENST00000563226 CYP2W1Q8TAV3 490 aa21.38■■□□□ 1.01
SMPD3-203ENST00000563226 DDX12PQ92771 950 aa21.38■■□□□ 1.01
SMPD3-203ENST00000563226 E9PMD0 336 aa21.37■■□□□ 1.01
SMPD3-203ENST00000563226 PIK3CDO00329 1044 aa21.37■■□□□ 1.01
SMPD3-203ENST00000563226 ARHGAP6O43182 974 aa21.37■■□□□ 1.01
SMPD3-203ENST00000563226 GYPCP04921 128 aa21.37■■□□□ 1.01
SMPD3-203ENST00000563226 GTF2F1P35269 517 aaKnown RBP eCLIP21.37■■□□□ 1.01
SMPD3-203ENST00000563226 GMPSP49915 693 aaPredicted RBP21.37■■□□□ 1.01
SMPD3-203ENST00000563226 MCTP2Q6DN12 878 aa21.37■■□□□ 1.01
SMPD3-203ENST00000563226 SAMD7Q7Z3H4 446 aa21.37■■□□□ 1.01
SMPD3-203ENST00000563226 SGIP1Q9BQI5 828 aa21.37■■□□□ 1.01
SMPD3-203ENST00000563226 THAP9Q9H5L6 903 aa21.37■■□□□ 1.01
SMPD3-203ENST00000563226 ITIH6Q6UXX5 1313 aa21.37■■□□□ 1.01
SMPD3-203ENST00000563226 MED24O75448 989 aa21.36■■□□□ 1.01
SMPD3-203ENST00000563226 ASNSP08243 561 aa21.36■■□□□ 1.01
SMPD3-203ENST00000563226 SLFN12Q8IYM2 578 aa21.36■■□□□ 1.01
SMPD3-203ENST00000563226 ANKRD20A12PQ8NF67 263 aa21.36■■□□□ 1.01
SMPD3-203ENST00000563226 CHURC1Q8WUH1 139 aa21.36■■□□□ 1.01
SMPD3-203ENST00000563226 SEMA6BQ9H3T3 888 aa21.36■■□□□ 1.01
SMPD3-203ENST00000563226 KIAA1024Q9UPX6 916 aa21.36■■□□□ 1.01
SMPD3-203ENST00000563226 PVALEFA0A1B0GWK0 134 aa21.36■■□□□ 1.01
SMPD3-203ENST00000563226 DYNC1I1O14576 645 aa21.36■■□□□ 1.01
SMPD3-203ENST00000563226 STX10O60499 249 aa21.36■■□□□ 1.01
SMPD3-203ENST00000563226 CFBP00751 764 aa21.36■■□□□ 1.01
SMPD3-203ENST00000563226 IDEP14735 1019 aa21.36■■□□□ 1.01
SMPD3-203ENST00000563226 FXR1P51114 621 aaKnown RBP eCLIP21.36■■□□□ 1.01
SMPD3-203ENST00000563226 COBLL1Q53SF7 1204 aa21.36■■□□□ 1.01
SMPD3-203ENST00000563226 PPFIBP1Q86W92 1011 aa21.36■■□□□ 1.01
SMPD3-203ENST00000563226 MICALL2Q8IY33 904 aa21.36■■□□□ 1.01
SMPD3-203ENST00000563226 CSGALNACT2Q8N6G5 542 aa21.36■■□□□ 1.01
SMPD3-203ENST00000563226 GLIS3Q8NEA6 775 aa21.36■■□□□ 1.01
SMPD3-203ENST00000563226 DNAJC19Q96DA6 116 aa21.36■■□□□ 1.01
SMPD3-203ENST00000563226 ZNF341Q9BYN7 854 aa21.36■■□□□ 1.01
SMPD3-203ENST00000563226 SH2D4AQ9H788 454 aa21.36■■□□□ 1.01
SMPD3-203ENST00000563226 KDM3AQ9Y4C1 1321 aa21.36■■□□□ 1.01
SMPD3-203ENST00000563226 CASP14P31944 242 aa21.35■■□□□ 1.01
SMPD3-203ENST00000563226 CIITAP33076 1130 aa21.35■■□□□ 1.01
SMPD3-203ENST00000563226 EHHADHQ08426 723 aa21.35■■□□□ 1.01
SMPD3-203ENST00000563226 DGKZQ13574 1117 aa21.35■■□□□ 1.01
SMPD3-203ENST00000563226 TBC1D10BQ4KMP7 808 aaPredicted RBP21.35■■□□□ 1.01
SMPD3-203ENST00000563226 TOGARAM2Q6ZUX3 1019 aa21.35■■□□□ 1.01
SMPD3-203ENST00000563226 CCDC125Q86Z20 511 aa21.35■■□□□ 1.01
SMPD3-203ENST00000563226 GJA3Q9Y6H8 435 aa21.35■■□□□ 1.01
SMPD3-203ENST00000563226 RNF225M0QZC1 329 aaPredicted RBP21.35■■□□□ 1.01
SMPD3-203ENST00000563226 MSH4O15457 936 aa21.35■■□□□ 1.01
SMPD3-203ENST00000563226 MFAP3LO75121 409 aa21.35■■□□□ 1.01
SMPD3-203ENST00000563226 SSBP05455 408 aaKnown RBP eCLIP21.35■■□□□ 1.01
SMPD3-203ENST00000563226 REXO1L1PQ8IX06 675 aa21.35■■□□□ 1.01
SMPD3-203ENST00000563226 PANX2Q96RD6 677 aa21.35■■□□□ 1.01
SMPD3-203ENST00000563226 NKRFO15226 690 aaKnown RBP eCLIP21.34■■□□□ 1.01
SMPD3-203ENST00000563226 RPS12P25398 132 aaKnown RBP21.34■■□□□ 1.01
SMPD3-203ENST00000563226 EEF1GP26641 437 aaKnown RBP21.34■■□□□ 1.01
SMPD3-203ENST00000563226 INPP5BP32019 993 aa21.34■■□□□ 1.01
SMPD3-203ENST00000563226 UBXN1Q04323 297 aa21.34■■□□□ 1.01
SMPD3-203ENST00000563226 MTF1Q14872 753 aa21.34■■□□□ 1.01
SMPD3-203ENST00000563226 NCAPH2Q6IBW4 605 aa21.34■■□□□ 1.01
SMPD3-203ENST00000563226 FEZ1Q99689 392 aa21.34■■□□□ 1.01
SMPD3-203ENST00000563226 NT5C3AQ9H0P0 336 aa21.34■■□□□ 1.01
SMPD3-203ENST00000563226 PAXBP1Q9Y5B6 917 aa21.34■■□□□ 1.01
SMPD3-203ENST00000563226 BICDL2A1A5D9 508 aa21.33■■□□□ 1.01
SMPD3-203ENST00000563226 POTEFA5A3E0 1075 aa21.33■■□□□ 1.01
SMPD3-203ENST00000563226 TBX3O15119 743 aa21.33■■□□□ 1.01
SMPD3-203ENST00000563226 PLA2G6O60733 806 aa21.33■■□□□ 1.01
SMPD3-203ENST00000563226 CYP3A4P08684 503 aa21.33■■□□□ 1.01
SMPD3-203ENST00000563226 POTEIP0CG38 1075 aa21.33■■□□□ 1.01
SMPD3-203ENST00000563226 POTEGQ6S5H5 508 aa21.33■■□□□ 1.01
SMPD3-203ENST00000563226 POTEEQ6S8J3 1075 aa21.33■■□□□ 1.01
SMPD3-203ENST00000563226 FAM160B2Q86V87 743 aa21.33■■□□□ 1.01
SMPD3-203ENST00000563226 FEM1BQ9UK73 627 aa21.33■■□□□ 1.01
SMPD3-203ENST00000563226 NPHP3-ACAD11A0A0J9YXS1 232 aa21.33■■□□□ 1
SMPD3-203ENST00000563226 SOWAHDA6NJG2 315 aa21.33■■□□□ 1
SMPD3-203ENST00000563226 LGALS16A8MUM7 142 aa21.33■■□□□ 1
SMPD3-203ENST00000563226 PLA2G4BP0C869 781 aa21.33■■□□□ 1
SMPD3-203ENST00000563226 UBXN2AP68543 259 aa21.33■■□□□ 1
SMPD3-203ENST00000563226 CENPPQ6IPU0 288 aa21.33■■□□□ 1
SMPD3-203ENST00000563226 SLC30A10Q6XR72 485 aa21.33■■□□□ 1
SMPD3-203ENST00000563226 NOC3LQ8WTT2 800 aaKnown RBP21.33■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 130.4 ms