RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 MAP3K20Q9NYL2 800 aaKnown RBP7.16□□□□□ -1.26
CNOT1-204ENST00000563130 SEPT9Q9UHD8 586 aaPredicted RBP7.16□□□□□ -1.26
CNOT1-204ENST00000563130 CNTNAP5Q8WYK1 1306 aa7.16□□□□□ -1.26
CNOT1-204ENST00000563130 LCTP09848 1927 aa7.16□□□□□ -1.26
CNOT1-204ENST00000563130 CCDC196A0A1B0GTZ2 297 aa7.16□□□□□ -1.26
CNOT1-204ENST00000563130 GOLGA8AA7E2F4 631 aa7.16□□□□□ -1.26
CNOT1-204ENST00000563130 GOLGA8BA8MQT2 603 aa7.16□□□□□ -1.26
CNOT1-204ENST00000563130 ZNF865P0CJ78 1059 aaPredicted RBP7.16□□□□□ -1.26
CNOT1-204ENST00000563130 METAP2P50579 478 aaKnown RBP eCLIP7.16□□□□□ -1.26
CNOT1-204ENST00000563130 HSD17B4P51659 736 aa7.16□□□□□ -1.26
CNOT1-204ENST00000563130 ARMCX2Q7L311 632 aa7.16□□□□□ -1.26
CNOT1-204ENST00000563130 MCF2L2Q86YR7 1114 aa7.16□□□□□ -1.26
CNOT1-204ENST00000563130 SAMD3Q8N6K7 520 aa7.16□□□□□ -1.26
CNOT1-204ENST00000563130 SYTL5Q8TDW5 730 aaPredicted RBP7.16□□□□□ -1.26
CNOT1-204ENST00000563130 RNF166Q96A37 237 aaPredicted RBP7.16□□□□□ -1.26
CNOT1-204ENST00000563130 RRP36Q96EU6 259 aaKnown RBP7.16□□□□□ -1.26
CNOT1-204ENST00000563130 DEFB118Q96PH6 123 aa7.16□□□□□ -1.26
CNOT1-204ENST00000563130 PTPDC1A2A3K4 754 aa7.15□□□□□ -1.26
CNOT1-204ENST00000563130 SEPT4O43236 478 aa7.15□□□□□ -1.26
CNOT1-204ENST00000563130 EN2P19622 333 aaPredicted RBP7.15□□□□□ -1.26
CNOT1-204ENST00000563130 EDNRBP24530 442 aa7.15□□□□□ -1.26
CNOT1-204ENST00000563130 PRAMEF19Q5SWL8 479 aa7.15□□□□□ -1.26
CNOT1-204ENST00000563130 UBE2Q1Q7Z7E8 422 aa7.15□□□□□ -1.26
CNOT1-204ENST00000563130 CCDC82Q8N4S0 544 aa7.15□□□□□ -1.26
CNOT1-204ENST00000563130 DNERQ8NFT8 737 aa7.15□□□□□ -1.26
CNOT1-204ENST00000563130 C22orf23Q9BZE7 217 aa7.15□□□□□ -1.26
CNOT1-204ENST00000563130 ABHD16BQ9H3Z7 469 aa7.15□□□□□ -1.26
CNOT1-204ENST00000563130 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.15□□□□□ -1.26
CNOT1-204ENST00000563130 COL20A1Q9P218 1284 aa7.15□□□□□ -1.26
CNOT1-204ENST00000563130 ADD3Q9UEY8 706 aaKnown RBP7.15□□□□□ -1.26
CNOT1-204ENST00000563130 OGDHLQ9ULD0 1010 aa7.15□□□□□ -1.26
CNOT1-204ENST00000563130 ADGRG1Q9Y653 693 aa7.15□□□□□ -1.26
CNOT1-204ENST00000563130 ASB14A6NK59 587 aa7.15□□□□□ -1.27
CNOT1-204ENST00000563130 MSCO60682 206 aa7.15□□□□□ -1.27
CNOT1-204ENST00000563130 OATP04181 439 aa7.15□□□□□ -1.27
CNOT1-204ENST00000563130 MYH6P13533 1939 aa7.15□□□□□ -1.27
CNOT1-204ENST00000563130 CALML3P27482 149 aa7.15□□□□□ -1.27
CNOT1-204ENST00000563130 ALDH5A1P51649 535 aaPredicted RBP7.15□□□□□ -1.27
CNOT1-204ENST00000563130 AK2P54819 239 aa7.15□□□□□ -1.27
CNOT1-204ENST00000563130 PLSCR2Q9NRY7 297 aa7.15□□□□□ -1.27
CNOT1-204ENST00000563130 SEC63Q9UGP8 760 aaKnown RBP7.15□□□□□ -1.27
CNOT1-204ENST00000563130 DDX20Q9UHI6 824 aaKnown RBP7.15□□□□□ -1.27
CNOT1-204ENST00000563130 TPCN1Q9ULQ1 816 aa7.15□□□□□ -1.27
CNOT1-204ENST00000563130 CNPY2Q9Y2B0 182 aa7.15□□□□□ -1.27
CNOT1-204ENST00000563130 V9GY48 417 aaPredicted RBP7.15□□□□□ -1.27
CNOT1-204ENST00000563130 hCG_1642624A0A1W2PR95 340 aa7.14□□□□□ -1.27
CNOT1-204ENST00000563130 SMAPO00193 183 aa7.14□□□□□ -1.27
CNOT1-204ENST00000563130 PIK3CDO00329 1044 aa7.14□□□□□ -1.27
CNOT1-204ENST00000563130 IFNAR1P17181 557 aa7.14□□□□□ -1.27
CNOT1-204ENST00000563130 FECHP22830 423 aa7.14□□□□□ -1.27
CNOT1-204ENST00000563130 ACVR2BQ13705 512 aa7.14□□□□□ -1.27
CNOT1-204ENST00000563130 ANKRD1Q15327 319 aa7.14□□□□□ -1.27
CNOT1-204ENST00000563130 ANKK1Q8NFD2 765 aa7.14□□□□□ -1.27
CNOT1-204ENST00000563130 PIBF1Q8WXW3 757 aa7.14□□□□□ -1.27
CNOT1-204ENST00000563130 DDX49Q9Y6V7 483 aaKnown RBP7.14□□□□□ -1.27
CNOT1-204ENST00000563130 hCG_1984214I3L0E3 225 aa7.13□□□□□ -1.27
CNOT1-204ENST00000563130 MEIS2O14770 477 aa7.13□□□□□ -1.27
CNOT1-204ENST00000563130 PRPF3O43395 683 aaKnown RBP7.13□□□□□ -1.27
CNOT1-204ENST00000563130 CFBP00751 764 aa7.13□□□□□ -1.27
CNOT1-204ENST00000563130 NEK4P51957 841 aa7.13□□□□□ -1.27
CNOT1-204ENST00000563130 CCT2P78371 535 aaKnown RBP7.13□□□□□ -1.27
CNOT1-204ENST00000563130 PKN1Q16512 942 aa7.13□□□□□ -1.27
CNOT1-204ENST00000563130 PFKFB3Q16875 520 aaPredicted RBP7.13□□□□□ -1.27
CNOT1-204ENST00000563130 WWC2Q6AWC2 1192 aa7.13□□□□□ -1.27
CNOT1-204ENST00000563130 TAPT1Q6NXT6 567 aa7.13□□□□□ -1.27
CNOT1-204ENST00000563130 TEX2Q8IWB9 1127 aa7.13□□□□□ -1.27
CNOT1-204ENST00000563130 ZNF713Q8N859 430 aaPredicted RBP7.13□□□□□ -1.27
CNOT1-204ENST00000563130 ANKLE1Q8NAG6 615 aa7.13□□□□□ -1.27
CNOT1-204ENST00000563130 WNT2BQ93097 391 aa7.13□□□□□ -1.27
CNOT1-204ENST00000563130 ZFRQ96KR1 1074 aaKnown RBP7.13□□□□□ -1.27
CNOT1-204ENST00000563130 TAAR1Q96RJ0 339 aa7.13□□□□□ -1.27
CNOT1-204ENST00000563130 RNF26Q9BY78 433 aaPredicted RBP7.13□□□□□ -1.27
CNOT1-204ENST00000563130 BACH2Q9BYV9 841 aa7.13□□□□□ -1.27
CNOT1-204ENST00000563130 NCOA5Q9HCD5 579 aaKnown RBP7.13□□□□□ -1.27
CNOT1-204ENST00000563130 NAP1L2Q9ULW6 460 aaPredicted RBP7.13□□□□□ -1.27
CNOT1-204ENST00000563130 FRMPD4Q14CM0 1322 aa7.13□□□□□ -1.27
CNOT1-204ENST00000563130 C3orf80F5H4A9 247 aa7.13□□□□□ -1.27
CNOT1-204ENST00000563130 GCOM1H8Y6P7 765 aaPredicted RBP7.13□□□□□ -1.27
CNOT1-204ENST00000563130 ADCY6O43306 1168 aa7.13□□□□□ -1.27
CNOT1-204ENST00000563130 PFKFB2O60825 505 aa7.13□□□□□ -1.27
CNOT1-204ENST00000563130 POLR2MP0CAP2 368 aa7.13□□□□□ -1.27
CNOT1-204ENST00000563130 AKR1A1P14550 325 aa7.13□□□□□ -1.27
CNOT1-204ENST00000563130 CNGA1P29973 690 aa7.13□□□□□ -1.27
CNOT1-204ENST00000563130 HOXA13P31271 388 aaPredicted RBP7.13□□□□□ -1.27
CNOT1-204ENST00000563130 SCRN1Q12765 414 aa7.13□□□□□ -1.27
CNOT1-204ENST00000563130 CCDC144BQ3MJ40 725 aa7.13□□□□□ -1.27
CNOT1-204ENST00000563130 NSUN6Q8TEA1 469 aaKnown RBP7.13□□□□□ -1.27
CNOT1-204ENST00000563130 IWS1Q96ST2 819 aa7.13□□□□□ -1.27
CNOT1-204ENST00000563130 RMDN3Q96TC7 470 aa7.13□□□□□ -1.27
CNOT1-204ENST00000563130 VTA1Q9NP79 307 aa7.13□□□□□ -1.27
CNOT1-204ENST00000563130 BARHL2Q9NY43 387 aa7.13□□□□□ -1.27
CNOT1-204ENST00000563130 MCM3APO60318 1980 aa7.13□□□□□ -1.27
CNOT1-204ENST00000563130 LRRC37A2A6NM11 1700 aa7.12□□□□□ -1.27
CNOT1-204ENST00000563130 RBM47A0AV96 593 aaKnown RBP7.12□□□□□ -1.27
CNOT1-204ENST00000563130 STXBP3O00186 592 aa7.12□□□□□ -1.27
CNOT1-204ENST00000563130 TFRCP02786 760 aaKnown RBP7.12□□□□□ -1.27
CNOT1-204ENST00000563130 SCG2P13521 617 aa7.12□□□□□ -1.27
CNOT1-204ENST00000563130 NKX3-2P78367 333 aa7.12□□□□□ -1.27
CNOT1-204ENST00000563130 ME3Q16798 604 aa7.12□□□□□ -1.27
CNOT1-204ENST00000563130 PPP1R18Q6NYC8 613 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms