RNA–Protein interactions for RNA: ENST00000562602.1

CFDP1-202, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-202ENST00000562602 VIPAS39Q9H9C1 493 aa8.37□□□□□ -1.07
CFDP1-202ENST00000562602 MRPL44Q9H9J2 332 aaKnown RBP8.37□□□□□ -1.07
CFDP1-202ENST00000562602 LZTFL1Q9NQ48 299 aa8.37□□□□□ -1.07
CFDP1-202ENST00000562602 EXOC1Q9NV70 894 aa8.37□□□□□ -1.07
CFDP1-202ENST00000562602 STK17AQ9UEE5 414 aa8.37□□□□□ -1.07
CFDP1-202ENST00000562602 MKRN1Q9UHC7 482 aaKnown RBP8.37□□□□□ -1.07
CFDP1-202ENST00000562602 PCDHA6Q9UN73 950 aa8.37□□□□□ -1.07
CFDP1-202ENST00000562602 PCDHA8Q9Y5H6 950 aa8.37□□□□□ -1.07
CFDP1-202ENST00000562602 EPN1Q9Y6I3 576 aaPredicted RBP8.37□□□□□ -1.07
CFDP1-202ENST00000562602 COL1A1P02452 1464 aaPredicted RBP8.37□□□□□ -1.07
CFDP1-202ENST00000562602 AFF2P51816 1311 aa8.36□□□□□ -1.07
CFDP1-202ENST00000562602 EP400Q96L91 3159 aa8.36□□□□□ -1.07
CFDP1-202ENST00000562602 STXBP3O00186 592 aa8.36□□□□□ -1.07
CFDP1-202ENST00000562602 MAP2K7O14733 419 aa8.36□□□□□ -1.07
CFDP1-202ENST00000562602 USO1O60763 962 aaKnown RBP8.36□□□□□ -1.07
CFDP1-202ENST00000562602 NDUFA10O95299 355 aa8.36□□□□□ -1.07
CFDP1-202ENST00000562602 TBC1D8O95759 1140 aa8.36□□□□□ -1.07
CFDP1-202ENST00000562602 OR52Z1P0C646 297 aa8.36□□□□□ -1.07
CFDP1-202ENST00000562602 SRGNP10124 158 aa8.36□□□□□ -1.07
CFDP1-202ENST00000562602 ATP2B4P23634 1241 aa8.36□□□□□ -1.07
CFDP1-202ENST00000562602 PRCPP42785 496 aa8.36□□□□□ -1.07
CFDP1-202ENST00000562602 GOLGA8FQ08AF8 430 aa8.36□□□□□ -1.07
CFDP1-202ENST00000562602 GOLGA8DPQ0D2H9 430 aa8.36□□□□□ -1.07
CFDP1-202ENST00000562602 SF3B2Q13435 895 aaKnown RBP8.36□□□□□ -1.07
CFDP1-202ENST00000562602 GRAPQ13588 217 aa8.36□□□□□ -1.07
CFDP1-202ENST00000562602 PDIA5Q14554 519 aa8.36□□□□□ -1.07
CFDP1-202ENST00000562602 MEA1Q16626 185 aa8.36□□□□□ -1.07
CFDP1-202ENST00000562602 LONRF2Q1L5Z9 754 aa8.36□□□□□ -1.07
CFDP1-202ENST00000562602 HSP90B2PQ58FF3 399 aa8.36□□□□□ -1.07
CFDP1-202ENST00000562602 HSP90AA4PQ58FG1 418 aa8.36□□□□□ -1.07
CFDP1-202ENST00000562602 FAM47AQ5JRC9 791 aa8.36□□□□□ -1.07
CFDP1-202ENST00000562602 MCTP2Q6DN12 878 aa8.36□□□□□ -1.07
CFDP1-202ENST00000562602 WDR93Q6P2C0 686 aa8.36□□□□□ -1.07
CFDP1-202ENST00000562602 TMC4Q7Z404 712 aa8.36□□□□□ -1.07
CFDP1-202ENST00000562602 NEDD1Q8NHV4 660 aa8.36□□□□□ -1.07
CFDP1-202ENST00000562602 GRAPLQ8TC17 118 aaPredicted RBP8.36□□□□□ -1.07
CFDP1-202ENST00000562602 HPS1Q92902 700 aa8.36□□□□□ -1.07
CFDP1-202ENST00000562602 SHISA4Q96DD7 197 aa8.36□□□□□ -1.07
CFDP1-202ENST00000562602 TRIM47Q96LD4 638 aa8.36□□□□□ -1.07
CFDP1-202ENST00000562602 DESI2Q9BSY9 194 aa8.36□□□□□ -1.07
CFDP1-202ENST00000562602 VPS16Q9H269 839 aa8.36□□□□□ -1.07
CFDP1-202ENST00000562602 MED4Q9NPJ6 270 aa8.36□□□□□ -1.07
CFDP1-202ENST00000562602 LUC7LQ9NQ29 371 aaKnown RBP8.36□□□□□ -1.07
CFDP1-202ENST00000562602 MAD2L2Q9UI95 211 aa8.36□□□□□ -1.07
CFDP1-202ENST00000562602 MYO6Q9UM54 1294 aa8.36□□□□□ -1.07
CFDP1-202ENST00000562602 SUGT1Q9Y2Z0 365 aa8.36□□□□□ -1.07
CFDP1-202ENST00000562602 RTCBQ9Y3I0 505 aaKnown RBP8.36□□□□□ -1.07
CFDP1-202ENST00000562602 MAST2Q6P0Q8 1798 aa8.35□□□□□ -1.07
CFDP1-202ENST00000562602 MYO5AQ9Y4I1 1855 aaKnown RBP8.35□□□□□ -1.07
CFDP1-202ENST00000562602 CYP2D7A0A087X1C5 515 aa8.35□□□□□ -1.07
CFDP1-202ENST00000562602 EIF3CLB5ME19 914 aaKnown RBP8.35□□□□□ -1.07
CFDP1-202ENST00000562602 SIAH2O43255 324 aa8.35□□□□□ -1.07
CFDP1-202ENST00000562602 PRLRP16471 622 aa8.35□□□□□ -1.07
CFDP1-202ENST00000562602 CCT6AP40227 531 aaKnown RBP8.35□□□□□ -1.07
CFDP1-202ENST00000562602 FXR1P51114 621 aaKnown RBP eCLIP8.35□□□□□ -1.07
CFDP1-202ENST00000562602 WNT7BP56706 349 aa8.35□□□□□ -1.07
CFDP1-202ENST00000562602 ITIH3Q06033 890 aa8.35□□□□□ -1.07
CFDP1-202ENST00000562602 SPA17Q15506 151 aa8.35□□□□□ -1.07
CFDP1-202ENST00000562602 IL17AQ16552 155 aa8.35□□□□□ -1.07
CFDP1-202ENST00000562602 PAPD7Q5XG87 772 aaKnown RBP8.35□□□□□ -1.07
CFDP1-202ENST00000562602 TBC1D9BQ66K14 1250 aa8.35□□□□□ -1.07
CFDP1-202ENST00000562602 C16orf86Q6ZW13 317 aa8.35□□□□□ -1.07
CFDP1-202ENST00000562602 SV2BQ7L1I2 683 aa8.35□□□□□ -1.07
CFDP1-202ENST00000562602 HEATR3Q7Z4Q2 680 aa8.35□□□□□ -1.07
CFDP1-202ENST00000562602 NEK8Q86SG6 692 aa8.35□□□□□ -1.07
CFDP1-202ENST00000562602 CABP7Q86V35 215 aa8.35□□□□□ -1.07
CFDP1-202ENST00000562602 ZSCAN29Q8IWY8 852 aaPredicted RBP8.35□□□□□ -1.07
CFDP1-202ENST00000562602 SLC35F6Q8N357 371 aa8.35□□□□□ -1.07
CFDP1-202ENST00000562602 CSGALNACT2Q8N6G5 542 aa8.35□□□□□ -1.07
CFDP1-202ENST00000562602 CCDC155Q8N6L0 562 aa8.35□□□□□ -1.07
CFDP1-202ENST00000562602 GOLGA6L1Q8N7Z2 621 aa8.35□□□□□ -1.07
CFDP1-202ENST00000562602 LINC00116Q8NCU8 138 aa8.35□□□□□ -1.07
CFDP1-202ENST00000562602 ZNF507Q8TCN5 953 aa8.35□□□□□ -1.07
CFDP1-202ENST00000562602 ZNF384Q8TF68 577 aa8.35□□□□□ -1.07
CFDP1-202ENST00000562602 P2RX5Q93086 422 aa8.35□□□□□ -1.07
CFDP1-202ENST00000562602 ERGIC2Q96RQ1 377 aa8.35□□□□□ -1.07
CFDP1-202ENST00000562602 EIF3CQ99613 913 aaKnown RBP8.35□□□□□ -1.07
CFDP1-202ENST00000562602 NUDT12Q9BQG2 462 aa8.35□□□□□ -1.07
CFDP1-202ENST00000562602 FUT8Q9BYC5 575 aa8.35□□□□□ -1.07
CFDP1-202ENST00000562602 BLZF1Q9H2G9 400 aa8.35□□□□□ -1.07
CFDP1-202ENST00000562602 RIC8AQ9NPQ8 531 aa8.35□□□□□ -1.07
CFDP1-202ENST00000562602 TAB2Q9NYJ8 693 aa8.35□□□□□ -1.07
CFDP1-202ENST00000562602 ANKIB1Q9P2G1 1089 aa8.35□□□□□ -1.07
CFDP1-202ENST00000562602 SCN7AQ01118 1682 aa8.34□□□□□ -1.07
CFDP1-202ENST00000562602 GPR75-ASB3A0A0A6YYF3 556 aa8.34□□□□□ -1.07
CFDP1-202ENST00000562602 hCG_1642624A0A1W2PR95 340 aa8.34□□□□□ -1.07
CFDP1-202ENST00000562602 A6NNZ2 444 aa8.34□□□□□ -1.07
CFDP1-202ENST00000562602 KLRF2D3W0D1 207 aa8.34□□□□□ -1.07
CFDP1-202ENST00000562602 C6orf229H3BNL8 230 aa8.34□□□□□ -1.07
CFDP1-202ENST00000562602 CLSTN1O94985 981 aa8.34□□□□□ -1.07
CFDP1-202ENST00000562602 TRIM21P19474 475 aaKnown RBP8.34□□□□□ -1.07
CFDP1-202ENST00000562602 PRDX5P30044 214 aa8.34□□□□□ -1.07
CFDP1-202ENST00000562602 HNRNPH3P31942 346 aaKnown RBP8.34□□□□□ -1.07
CFDP1-202ENST00000562602 ARHGAP25P42331 645 aa8.34□□□□□ -1.07
CFDP1-202ENST00000562602 NOVP48745 357 aa8.34□□□□□ -1.07
CFDP1-202ENST00000562602 NAPAP54920 295 aa8.34□□□□□ -1.07
CFDP1-202ENST00000562602 ERVK-24P63145 666 aa8.34□□□□□ -1.07
CFDP1-202ENST00000562602 LRRC63Q05C16 580 aa8.34□□□□□ -1.07
CFDP1-202ENST00000562602 TBC1D8BQ0IIM8 1120 aa8.34□□□□□ -1.07
CFDP1-202ENST00000562602 MTF1Q14872 753 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms