RNA–Protein interactions for RNA: ENST00000562411.5

SNAPC5-204, Transcript of small nuclear RNA activating complex polypeptide 5, humanhuman

TSL 3

Gene SNAPC5, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC5-204ENST00000562411 SPDYE3A6NKU9 549 aa12.57□□□□□ -0.4
SNAPC5-204ENST00000562411 H0YGN5 161 aa12.57□□□□□ -0.4
SNAPC5-204ENST00000562411 CTAGE5O15320 804 aa12.57□□□□□ -0.4
SNAPC5-204ENST00000562411 LARGE1O95461 756 aa12.57□□□□□ -0.4
SNAPC5-204ENST00000562411 ASGR1P07306 291 aa12.57□□□□□ -0.4
SNAPC5-204ENST00000562411 IFNAR1P17181 557 aa12.57□□□□□ -0.4
SNAPC5-204ENST00000562411 NEK4P51957 841 aa12.57□□□□□ -0.4
SNAPC5-204ENST00000562411 ANKRD1Q15327 319 aa12.57□□□□□ -0.4
SNAPC5-204ENST00000562411 NTRK3Q16288 839 aa12.57□□□□□ -0.4
SNAPC5-204ENST00000562411 TRIM60Q495X7 471 aa12.57□□□□□ -0.4
SNAPC5-204ENST00000562411 GNASQ5JWF2 1037 aa12.57□□□□□ -0.4
SNAPC5-204ENST00000562411 TRIM22Q8IYM9 498 aa12.57□□□□□ -0.4
SNAPC5-204ENST00000562411 PCSK9Q8NBP7 692 aaKnown RBP12.57□□□□□ -0.4
SNAPC5-204ENST00000562411 PGBD1Q96JS3 809 aa12.57□□□□□ -0.4
SNAPC5-204ENST00000562411 TSEN34Q9BSV6 310 aaKnown RBP12.57□□□□□ -0.4
SNAPC5-204ENST00000562411 RNF26Q9BY78 433 aaPredicted RBP12.57□□□□□ -0.4
SNAPC5-204ENST00000562411 SLKQ9H2G2 1235 aaPredicted RBP12.57□□□□□ -0.4
SNAPC5-204ENST00000562411 RIC8AQ9NPQ8 531 aa12.57□□□□□ -0.4
SNAPC5-204ENST00000562411 STARD7Q9NQZ5 370 aa12.57□□□□□ -0.4
SNAPC5-204ENST00000562411 PCDH10Q9P2E7 1040 aa12.57□□□□□ -0.4
SNAPC5-204ENST00000562411 TPCN1Q9ULQ1 816 aa12.57□□□□□ -0.4
SNAPC5-204ENST00000562411 ZMYND8Q9ULU4 1186 aaPredicted RBP12.57□□□□□ -0.4
SNAPC5-204ENST00000562411 NR2E3Q9Y5X4 410 aa12.57□□□□□ -0.4
SNAPC5-204ENST00000562411 NKRFO15226 690 aaKnown RBP eCLIP12.56□□□□□ -0.4
SNAPC5-204ENST00000562411 PRPF3O43395 683 aaKnown RBP12.56□□□□□ -0.4
SNAPC5-204ENST00000562411 SORBS3O60504 671 aa12.56□□□□□ -0.4
SNAPC5-204ENST00000562411 EIF3JO75822 258 aaKnown RBP12.56□□□□□ -0.4
SNAPC5-204ENST00000562411 CPT1AP50416 773 aa12.56□□□□□ -0.4
SNAPC5-204ENST00000562411 SCRN1Q12765 414 aa12.56□□□□□ -0.4
SNAPC5-204ENST00000562411 PKN1Q16512 942 aa12.56□□□□□ -0.4
SNAPC5-204ENST00000562411 LY6KQ17RY6 165 aa12.56□□□□□ -0.4
SNAPC5-204ENST00000562411 CCSAPQ6IQ19 270 aaPredicted RBP12.56□□□□□ -0.4
SNAPC5-204ENST00000562411 CPLX2Q6PUV4 134 aaKnown RBP12.56□□□□□ -0.4
SNAPC5-204ENST00000562411 SLC39A5Q6ZMH5 540 aa12.56□□□□□ -0.4
SNAPC5-204ENST00000562411 CCDC12Q8WUD4 166 aaPredicted RBP12.56□□□□□ -0.4
SNAPC5-204ENST00000562411 GLT1D1Q96MS3 346 aa12.56□□□□□ -0.4
SNAPC5-204ENST00000562411 C22orf23Q9BZE7 217 aa12.56□□□□□ -0.4
SNAPC5-204ENST00000562411 EHMT1Q9H9B1 1298 aa12.56□□□□□ -0.4
SNAPC5-204ENST00000562411 UPF2Q9HAU5 1272 aaKnown RBP12.56□□□□□ -0.4
SNAPC5-204ENST00000562411 SMCO2A6NFE2 343 aa12.55□□□□□ -0.4
SNAPC5-204ENST00000562411 ZEB2O60315 1214 aa12.55□□□□□ -0.4
SNAPC5-204ENST00000562411 PFKFB2O60825 505 aa12.55□□□□□ -0.4
SNAPC5-204ENST00000562411 DTNBO60941 627 aa12.55□□□□□ -0.4
SNAPC5-204ENST00000562411 RGS20O76081 388 aa12.55□□□□□ -0.4
SNAPC5-204ENST00000562411 GH1P01241 217 aa12.55□□□□□ -0.4
SNAPC5-204ENST00000562411 MYL3P08590 195 aa12.55□□□□□ -0.4
SNAPC5-204ENST00000562411 SYN1P17600 705 aa12.55□□□□□ -0.4
SNAPC5-204ENST00000562411 UBA1P22314 1058 aaKnown RBP12.55□□□□□ -0.4
SNAPC5-204ENST00000562411 NKX3-2P78367 333 aa12.55□□□□□ -0.4
SNAPC5-204ENST00000562411 MRPS9P82933 396 aaKnown RBP12.55□□□□□ -0.4
SNAPC5-204ENST00000562411 ARHGAP1Q07960 439 aa12.55□□□□□ -0.4
SNAPC5-204ENST00000562411 SSRP1Q08945 709 aaKnown RBP12.55□□□□□ -0.4
SNAPC5-204ENST00000562411 SNX17Q15036 470 aa12.55□□□□□ -0.4
SNAPC5-204ENST00000562411 GNPTABQ3T906 1256 aa12.55□□□□□ -0.4
SNAPC5-204ENST00000562411 PCNX4Q63HM2 1172 aa12.55□□□□□ -0.4
SNAPC5-204ENST00000562411 CCDC62Q6P9F0 684 aa12.55□□□□□ -0.4
SNAPC5-204ENST00000562411 CXCL17Q6UXB2 119 aa12.55□□□□□ -0.4
SNAPC5-204ENST00000562411 VSIG10LQ86VR7 867 aa12.55□□□□□ -0.4
SNAPC5-204ENST00000562411 CCDC148Q8NFR7 591 aa12.55□□□□□ -0.4
SNAPC5-204ENST00000562411 VTI1AQ96AJ9 217 aa12.55□□□□□ -0.4
SNAPC5-204ENST00000562411 ANO3Q9BYT9 981 aa12.55□□□□□ -0.4
SNAPC5-204ENST00000562411 ALDH8A1Q9H2A2 487 aaPredicted RBP12.55□□□□□ -0.4
SNAPC5-204ENST00000562411 PRDM5Q9NQX1 630 aaPredicted RBP12.55□□□□□ -0.4
SNAPC5-204ENST00000562411 TMEM260Q9NX78 707 aa12.55□□□□□ -0.4
SNAPC5-204ENST00000562411 VPS54Q9P1Q0 977 aa12.55□□□□□ -0.4
SNAPC5-204ENST00000562411 PCDHA6Q9UN73 950 aa12.55□□□□□ -0.4
SNAPC5-204ENST00000562411 Q9Y3F1 56 aa12.55□□□□□ -0.4
SNAPC5-204ENST00000562411 PCDHA8Q9Y5H6 950 aa12.55□□□□□ -0.4
SNAPC5-204ENST00000562411 SCN10AQ9Y5Y9 1956 aa12.54□□□□□ -0.4
SNAPC5-204ENST00000562411 A0A0U1RQG5 324 aaPredicted RBP12.54□□□□□ -0.4
SNAPC5-204ENST00000562411 ESYT2A0FGR8 921 aa12.54□□□□□ -0.4
SNAPC5-204ENST00000562411 PQBP1O60828 265 aaKnown RBP12.54□□□□□ -0.4
SNAPC5-204ENST00000562411 CDKL5O76039 1030 aa12.54□□□□□ -0.4
SNAPC5-204ENST00000562411 DEXIO95424 95 aa12.54□□□□□ -0.4
SNAPC5-204ENST00000562411 MMP3P08254 477 aa12.54□□□□□ -0.4
SNAPC5-204ENST00000562411 AP3B2Q13367 1082 aa12.54□□□□□ -0.4
SNAPC5-204ENST00000562411 BRDTQ58F21 947 aaPredicted RBP12.54□□□□□ -0.4
SNAPC5-204ENST00000562411 REXO1Q8N1G1 1221 aaKnown RBP12.54□□□□□ -0.4
SNAPC5-204ENST00000562411 NECAB1Q8N987 351 aa12.54□□□□□ -0.4
SNAPC5-204ENST00000562411 GTF3C6Q969F1 213 aa12.54□□□□□ -0.4
SNAPC5-204ENST00000562411 INPP4AQ96PE3 977 aaPredicted RBP12.54□□□□□ -0.4
SNAPC5-204ENST00000562411 C6orf50Q9HD87 102 aa12.54□□□□□ -0.4
SNAPC5-204ENST00000562411 RTEL1Q9NZ71 1219 aa12.54□□□□□ -0.4
SNAPC5-204ENST00000562411 TANC1Q9C0D5 1861 aa12.54□□□□□ -0.4
SNAPC5-204ENST00000562411 STK36Q9NRP7 1315 aa12.54□□□□□ -0.4
SNAPC5-204ENST00000562411 DNAH12Q6ZR08 3092 aa12.53□□□□□ -0.4
SNAPC5-204ENST00000562411 FIBPO43427 364 aa12.53□□□□□ -0.4
SNAPC5-204ENST00000562411 STAM2O75886 525 aa12.53□□□□□ -0.4
SNAPC5-204ENST00000562411 GGPS1O95749 300 aa12.53□□□□□ -0.4
SNAPC5-204ENST00000562411 RBM25P49756 843 aaKnown RBP12.53□□□□□ -0.4
SNAPC5-204ENST00000562411 PSMC6P62333 389 aa12.53□□□□□ -0.4
SNAPC5-204ENST00000562411 ME3Q16798 604 aa12.53□□□□□ -0.4
SNAPC5-204ENST00000562411 JAKMIP3Q5VZ66 844 aa12.53□□□□□ -0.4
SNAPC5-204ENST00000562411 DHX37Q8IY37 1157 aaKnown RBP12.53□□□□□ -0.4
SNAPC5-204ENST00000562411 RASGRP4Q8TDF6 673 aa12.53□□□□□ -0.4
SNAPC5-204ENST00000562411 AFG1LQ8WV93 481 aa12.53□□□□□ -0.4
SNAPC5-204ENST00000562411 AIFM3Q96NN9 605 aa12.53□□□□□ -0.4
SNAPC5-204ENST00000562411 KIF2CQ99661 725 aa12.53□□□□□ -0.4
SNAPC5-204ENST00000562411 GLT8D2Q9H1C3 349 aa12.53□□□□□ -0.4
SNAPC5-204ENST00000562411 PDLIM7Q9NR12 457 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms