RNA–Protein interactions for RNA: ENST00000562404.1

LPCAT4-202, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-202ENST00000562404 BCAS3Q9H6U6 928 aa12.83□□□□□ -0.36
LPCAT4-202ENST00000562404 PPP4R2Q9NY27 417 aa12.83□□□□□ -0.36
LPCAT4-202ENST00000562404 MAP3K20Q9NYL2 800 aaKnown RBP12.83□□□□□ -0.36
LPCAT4-202ENST00000562404 FRMPD4Q14CM0 1322 aa12.83□□□□□ -0.36
LPCAT4-202ENST00000562404 CNTNAP5Q8WYK1 1306 aa12.83□□□□□ -0.36
LPCAT4-202ENST00000562404 CDH23Q9H251 3354 aa12.82□□□□□ -0.36
LPCAT4-202ENST00000562404 B4DLN1 442 aa12.82□□□□□ -0.36
LPCAT4-202ENST00000562404 NKRFO15226 690 aaKnown RBP eCLIP12.82□□□□□ -0.36
LPCAT4-202ENST00000562404 SORBS3O60504 671 aa12.82□□□□□ -0.36
LPCAT4-202ENST00000562404 EIF3JO75822 258 aaKnown RBP12.82□□□□□ -0.36
LPCAT4-202ENST00000562404 CABYRO75952 493 aa12.82□□□□□ -0.36
LPCAT4-202ENST00000562404 TIMP1P01033 207 aa12.82□□□□□ -0.36
LPCAT4-202ENST00000562404 CDC27P30260 824 aa12.82□□□□□ -0.36
LPCAT4-202ENST00000562404 CYP2C18P33260 490 aa12.82□□□□□ -0.36
LPCAT4-202ENST00000562404 MRPL12P52815 198 aaKnown RBP12.82□□□□□ -0.36
LPCAT4-202ENST00000562404 MRPS9P82933 396 aaKnown RBP12.82□□□□□ -0.36
LPCAT4-202ENST00000562404 SP2Q02086 613 aa12.82□□□□□ -0.36
LPCAT4-202ENST00000562404 TYW1BQ6NUM6 668 aa12.82□□□□□ -0.36
LPCAT4-202ENST00000562404 Q7L0L9 218 aa12.82□□□□□ -0.36
LPCAT4-202ENST00000562404 C16orf59Q7L2K0 433 aa12.82□□□□□ -0.36
LPCAT4-202ENST00000562404 RRP36Q96EU6 259 aaKnown RBP12.82□□□□□ -0.36
LPCAT4-202ENST00000562404 GBF1Q92538 1859 aa12.82□□□□□ -0.36
LPCAT4-202ENST00000562404 MROH7Q68CQ1 1323 aa12.82□□□□□ -0.36
LPCAT4-202ENST00000562404 TET1Q8NFU7 2136 aa12.82□□□□□ -0.36
LPCAT4-202ENST00000562404 COL6A3P12111 3177 aa12.81□□□□□ -0.36
LPCAT4-202ENST00000562404 KLF18A0A0U1RQI7 1052 aa12.81□□□□□ -0.36
LPCAT4-202ENST00000562404 ZEB2O60315 1214 aa12.81□□□□□ -0.36
LPCAT4-202ENST00000562404 MMP3P08254 477 aa12.81□□□□□ -0.36
LPCAT4-202ENST00000562404 CALM1P0DP23 149 aa12.81□□□□□ -0.36
LPCAT4-202ENST00000562404 CALM2P0DP24 149 aa12.81□□□□□ -0.36
LPCAT4-202ENST00000562404 CALM3P0DP25 149 aa12.81□□□□□ -0.36
LPCAT4-202ENST00000562404 GNAQP50148 359 aa12.81□□□□□ -0.36
LPCAT4-202ENST00000562404 CPT1AP50416 773 aa12.81□□□□□ -0.36
LPCAT4-202ENST00000562404 APOBRQ0VD83 1088 aa12.81□□□□□ -0.36
LPCAT4-202ENST00000562404 SEMA3FQ13275 785 aa12.81□□□□□ -0.36
LPCAT4-202ENST00000562404 NBPF20Q3BBV1 942 aa12.81□□□□□ -0.36
LPCAT4-202ENST00000562404 SAMD3Q8N6K7 520 aa12.81□□□□□ -0.36
LPCAT4-202ENST00000562404 KAT2BQ92831 832 aa12.81□□□□□ -0.36
LPCAT4-202ENST00000562404 VWCEQ96DN2 955 aa12.81□□□□□ -0.36
LPCAT4-202ENST00000562404 JAKMIP1Q96N16 626 aaKnown RBP12.81□□□□□ -0.36
LPCAT4-202ENST00000562404 LZTS2Q9BRK4 669 aa12.81□□□□□ -0.36
LPCAT4-202ENST00000562404 MTG1Q9BT17 334 aaPredicted RBP12.81□□□□□ -0.36
LPCAT4-202ENST00000562404 ALDH8A1Q9H2A2 487 aaPredicted RBP12.81□□□□□ -0.36
LPCAT4-202ENST00000562404 TRMT13Q9NUP7 481 aaKnown RBP12.81□□□□□ -0.36
LPCAT4-202ENST00000562404 POLR3EQ9NVU0 708 aa12.81□□□□□ -0.36
LPCAT4-202ENST00000562404 TELO2Q9Y4R8 837 aa12.81□□□□□ -0.36
LPCAT4-202ENST00000562404 MRVI1Q9Y6F6 885 aa12.81□□□□□ -0.36
LPCAT4-202ENST00000562404 TANC1Q9C0D5 1861 aa12.8□□□□□ -0.36
LPCAT4-202ENST00000562404 ZBTB43O43298 467 aa12.8□□□□□ -0.36
LPCAT4-202ENST00000562404 GH1P01241 217 aa12.8□□□□□ -0.36
LPCAT4-202ENST00000562404 CSF2RAP15509 400 aa12.8□□□□□ -0.36
LPCAT4-202ENST00000562404 FPGSQ05932 587 aa12.8□□□□□ -0.36
LPCAT4-202ENST00000562404 KRT32Q14532 448 aa12.8□□□□□ -0.36
LPCAT4-202ENST00000562404 UBE2SQ16763 222 aa12.8□□□□□ -0.36
LPCAT4-202ENST00000562404 MFSD5Q6N075 450 aa12.8□□□□□ -0.36
LPCAT4-202ENST00000562404 Q6ZUG5 572 aa12.8□□□□□ -0.36
LPCAT4-202ENST00000562404 CTAGE1Q96RT6 745 aa12.8□□□□□ -0.36
LPCAT4-202ENST00000562404 WNT8AQ9H1J5 351 aa12.8□□□□□ -0.36
LPCAT4-202ENST00000562404 RTEL1Q9NZ71 1219 aa12.8□□□□□ -0.36
LPCAT4-202ENST00000562404 SEC63Q9UGP8 760 aaKnown RBP12.8□□□□□ -0.36
LPCAT4-202ENST00000562404 PIK3CDO00329 1044 aa12.79□□□□□ -0.36
LPCAT4-202ENST00000562404 TLR3O15455 904 aaKnown RBP12.79□□□□□ -0.36
LPCAT4-202ENST00000562404 ACRP10323 421 aa12.79□□□□□ -0.36
LPCAT4-202ENST00000562404 CYP2C9P11712 490 aa12.79□□□□□ -0.36
LPCAT4-202ENST00000562404 UBA1P22314 1058 aaKnown RBP12.79□□□□□ -0.36
LPCAT4-202ENST00000562404 RPS6KB1P23443 525 aa12.79□□□□□ -0.36
LPCAT4-202ENST00000562404 CCND2P30279 289 aa12.79□□□□□ -0.36
LPCAT4-202ENST00000562404 ADD1P35611 737 aaKnown RBP12.79□□□□□ -0.36
LPCAT4-202ENST00000562404 TRAF1Q13077 416 aa12.79□□□□□ -0.36
LPCAT4-202ENST00000562404 RTN1Q16799 776 aa12.79□□□□□ -0.36
LPCAT4-202ENST00000562404 HSDL1Q3SXM5 330 aa12.79□□□□□ -0.36
LPCAT4-202ENST00000562404 MYSM1Q5VVJ2 828 aa12.79□□□□□ -0.36
LPCAT4-202ENST00000562404 WWC2Q6AWC2 1192 aa12.79□□□□□ -0.36
LPCAT4-202ENST00000562404 BRF1Q92994 677 aa12.79□□□□□ -0.36
LPCAT4-202ENST00000562404 EMID1Q96A84 441 aaPredicted RBP12.79□□□□□ -0.36
LPCAT4-202ENST00000562404 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.79□□□□□ -0.365e-7■■□□□ 13.8
LPCAT4-202ENST00000562404 NOC4LQ9BVI4 516 aaKnown RBP12.79□□□□□ -0.36
LPCAT4-202ENST00000562404 USP26Q9BXU7 913 aa12.79□□□□□ -0.36
LPCAT4-202ENST00000562404 AGXT2Q9BYV1 514 aa12.79□□□□□ -0.36
LPCAT4-202ENST00000562404 GOLGA8AA7E2F4 631 aa12.78□□□□□ -0.36
LPCAT4-202ENST00000562404 GOLGA8BA8MQT2 603 aa12.78□□□□□ -0.36
LPCAT4-202ENST00000562404 ADAMTS3O15072 1205 aa12.78□□□□□ -0.36
LPCAT4-202ENST00000562404 GGPS1O95749 300 aa12.78□□□□□ -0.36
LPCAT4-202ENST00000562404 ZNF286BP0CG31 522 aa12.78□□□□□ -0.36
LPCAT4-202ENST00000562404 CCL23P55773 120 aa12.78□□□□□ -0.36
LPCAT4-202ENST00000562404 TMEM240Q5SV17 173 aa12.78□□□□□ -0.36
LPCAT4-202ENST00000562404 CELF3Q5SZQ8 465 aaKnown RBP12.78□□□□□ -0.36
LPCAT4-202ENST00000562404 FAM109BQ6ICB4 259 aaPredicted RBP12.78□□□□□ -0.36
LPCAT4-202ENST00000562404 BLOC1S2Q6QNY1 142 aa12.78□□□□□ -0.36
LPCAT4-202ENST00000562404 SYNE3Q6ZMZ3 975 aa12.78□□□□□ -0.36
LPCAT4-202ENST00000562404 SMARCC2Q8TAQ2 1214 aa12.78□□□□□ -0.36
LPCAT4-202ENST00000562404 INPP4AQ96PE3 977 aaPredicted RBP12.78□□□□□ -0.36
LPCAT4-202ENST00000562404 HIPK3Q9H422 1215 aa12.78□□□□□ -0.36
LPCAT4-202ENST00000562404 RBM28Q9NW13 759 aaKnown RBP12.78□□□□□ -0.36
LPCAT4-202ENST00000562404 V9GY48 417 aaPredicted RBP12.78□□□□□ -0.36
LPCAT4-202ENST00000562404 PTPRSQ13332 1948 aa12.78□□□□□ -0.36
LPCAT4-202ENST00000562404 PPFIA3O75145 1194 aa12.77□□□□□ -0.37
LPCAT4-202ENST00000562404 REC8O95072 547 aa12.77□□□□□ -0.37
LPCAT4-202ENST00000562404 HMGB1P09429 215 aaKnown RBP12.77□□□□□ -0.37
LPCAT4-202ENST00000562404 HOXD8P13378 290 aaPredicted RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms