RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 RASEFQ8IZ41 740 aa20.56■□□□□ 0.88
CMTM3-204ENST00000562357 SRBD1Q8N5C6 995 aaKnown RBP20.56■□□□□ 0.88
CMTM3-204ENST00000562357 PPP1R12CQ9BZL4 782 aa20.56■□□□□ 0.88
CMTM3-204ENST00000562357 ZBTB43O43298 467 aa20.55■□□□□ 0.88
CMTM3-204ENST00000562357 CD4P01730 458 aa20.55■□□□□ 0.88
CMTM3-204ENST00000562357 LAMC2Q13753 1193 aa20.55■□□□□ 0.88
CMTM3-204ENST00000562357 TMTC3Q6ZXV5 915 aa20.55■□□□□ 0.88
CMTM3-204ENST00000562357 VSIG10LQ86VR7 867 aa20.55■□□□□ 0.88
CMTM3-204ENST00000562357 CMTR1Q8N1G2 835 aaKnown RBP20.55■□□□□ 0.88
CMTM3-204ENST00000562357 AFG1LQ8WV93 481 aa20.55■□□□□ 0.88
CMTM3-204ENST00000562357 RNPC3Q96LT9 517 aaKnown RBP20.55■□□□□ 0.88
CMTM3-204ENST00000562357 TCEANC2Q96MN5 208 aa20.55■□□□□ 0.88
CMTM3-204ENST00000562357 HIPK3Q9H422 1215 aa20.55■□□□□ 0.88
CMTM3-204ENST00000562357 DDX41Q9UJV9 622 aaKnown RBP20.55■□□□□ 0.88
CMTM3-204ENST00000562357 NAP1L2Q9ULW6 460 aaPredicted RBP20.55■□□□□ 0.88
CMTM3-204ENST00000562357 GRIN2DO15399 1336 aa20.54■□□□□ 0.88
CMTM3-204ENST00000562357 BAZ2BQ9UIF8 2168 aaKnown RBP20.54■□□□□ 0.88
CMTM3-204ENST00000562357 STAM2O75886 525 aa20.54■□□□□ 0.88
CMTM3-204ENST00000562357 CASTP20810 708 aaKnown RBP20.54■□□□□ 0.88
CMTM3-204ENST00000562357 CHMP4BP1P59074 171 aa20.54■□□□□ 0.88
CMTM3-204ENST00000562357 ARHGAP1Q07960 439 aa20.54■□□□□ 0.88
CMTM3-204ENST00000562357 COL9A3Q14050 684 aaPredicted RBP20.54■□□□□ 0.88
CMTM3-204ENST00000562357 RTN1Q16799 776 aa20.54■□□□□ 0.88
CMTM3-204ENST00000562357 ADCK5Q3MIX3 580 aa20.54■□□□□ 0.88
CMTM3-204ENST00000562357 C9orf50Q5SZB4 431 aa20.54■□□□□ 0.88
CMTM3-204ENST00000562357 DHX37Q8IY37 1157 aaKnown RBP20.54■□□□□ 0.88
CMTM3-204ENST00000562357 CCDC82Q8N4S0 544 aa20.54■□□□□ 0.88
CMTM3-204ENST00000562357 ALDH8A1Q9H2A2 487 aaPredicted RBP20.54■□□□□ 0.88
CMTM3-204ENST00000562357 PPP4R2Q9NY27 417 aa20.54■□□□□ 0.88
CMTM3-204ENST00000562357 B4GALT4O60513 344 aa20.53■□□□□ 0.88
CMTM3-204ENST00000562357 MMP3P08254 477 aa20.53■□□□□ 0.88
CMTM3-204ENST00000562357 TGFB3P10600 412 aa20.53■□□□□ 0.88
CMTM3-204ENST00000562357 HSPA4P34932 840 aa20.53■□□□□ 0.88
CMTM3-204ENST00000562357 EXOSC10Q01780 885 aaKnown RBP20.53■□□□□ 0.88
CMTM3-204ENST00000562357 DGKDQ16760 1214 aa20.53■□□□□ 0.88
CMTM3-204ENST00000562357 NFRKBQ6P4R8 1299 aa20.53■□□□□ 0.88
CMTM3-204ENST00000562357 BLOC1S2Q6QNY1 142 aa20.53■□□□□ 0.88
CMTM3-204ENST00000562357 EMID1Q96A84 441 aaPredicted RBP20.53■□□□□ 0.88
CMTM3-204ENST00000562357 JAKMIP1Q96N16 626 aaKnown RBP20.53■□□□□ 0.88
CMTM3-204ENST00000562357 TRPV6Q9H1D0 765 aa20.53■□□□□ 0.88
CMTM3-204ENST00000562357 NOD1Q9Y239 953 aa20.53■□□□□ 0.88
CMTM3-204ENST00000562357 KLF18A0A0U1RQI7 1052 aa20.52■□□□□ 0.88
CMTM3-204ENST00000562357 GOLGA8AA7E2F4 631 aa20.52■□□□□ 0.88
CMTM3-204ENST00000562357 GOLGA8BA8MQT2 603 aa20.52■□□□□ 0.88
CMTM3-204ENST00000562357 PIK3CDO00329 1044 aa20.52■□□□□ 0.88
CMTM3-204ENST00000562357 PSMA5P28066 241 aa20.52■□□□□ 0.88
CMTM3-204ENST00000562357 PTPN11Q06124 597 aaPredicted RBP20.52■□□□□ 0.88
CMTM3-204ENST00000562357 NBPF20Q3BBV1 942 aa20.52■□□□□ 0.88
CMTM3-204ENST00000562357 HEATR3Q7Z4Q2 680 aa20.52■□□□□ 0.88
CMTM3-204ENST00000562357 DEFB123Q8N688 67 aa20.52■□□□□ 0.88
CMTM3-204ENST00000562357 IL31RAQ8NI17 732 aa20.52■□□□□ 0.88
CMTM3-204ENST00000562357 KATNAL1Q9BW62 490 aa20.52■□□□□ 0.88
CMTM3-204ENST00000562357 PSTPIP2Q9H939 334 aa20.52■□□□□ 0.88
CMTM3-204ENST00000562357 CCDC196A0A1B0GTZ2 297 aa20.51■□□□□ 0.87
CMTM3-204ENST00000562357 CSF2RAP15509 400 aa20.51■□□□□ 0.87
CMTM3-204ENST00000562357 CYP2C18P33260 490 aa20.51■□□□□ 0.87
CMTM3-204ENST00000562357 RCAN1P53805 252 aa20.51■□□□□ 0.87
CMTM3-204ENST00000562357 XRRA1Q6P2D8 792 aa20.51■□□□□ 0.87
CMTM3-204ENST00000562357 PSRC1Q6PGN9 363 aaPredicted RBP20.51■□□□□ 0.87
CMTM3-204ENST00000562357 PPTC7Q8NI37 304 aa20.51■□□□□ 0.87
CMTM3-204ENST00000562357 MTIF3Q9H2K0 278 aaKnown RBP20.51■□□□□ 0.87
CMTM3-204ENST00000562357 FRMPD4Q14CM0 1322 aa20.51■□□□□ 0.87
CMTM3-204ENST00000562357 SPDYE3A6NKU9 549 aa20.5■□□□□ 0.87
CMTM3-204ENST00000562357 EPB41L2O43491 1005 aaKnown RBP20.5■□□□□ 0.87
CMTM3-204ENST00000562357 GGPS1O95749 300 aa20.5■□□□□ 0.87
CMTM3-204ENST00000562357 EPHB4P54760 987 aa20.5■□□□□ 0.87
CMTM3-204ENST00000562357 USP17L6PQ6QN14 398 aa20.5■□□□□ 0.87
CMTM3-204ENST00000562357 KCNB2Q92953 911 aa20.5■□□□□ 0.87
CMTM3-204ENST00000562357 NOC4LQ9BVI4 516 aaKnown RBP20.5■□□□□ 0.87
CMTM3-204ENST00000562357 EHMT1Q9H9B1 1298 aa20.5■□□□□ 0.87
CMTM3-204ENST00000562357 MLXIPQ9HAP2 919 aa20.5■□□□□ 0.87
CMTM3-204ENST00000562357 TRMT13Q9NUP7 481 aaKnown RBP20.5■□□□□ 0.87
CMTM3-204ENST00000562357 BRPF3Q9ULD4 1205 aa20.5■□□□□ 0.87
CMTM3-204ENST00000562357 SNX14Q9Y5W7 946 aa20.5■□□□□ 0.87
CMTM3-204ENST00000562357 LAMA3Q16787 3333 aa20.5■□□□□ 0.87
CMTM3-204ENST00000562357 hCG_1642624A0A1W2PR95 340 aa20.49■□□□□ 0.87
CMTM3-204ENST00000562357 METAP2P50579 478 aaKnown RBP eCLIP20.49■□□□□ 0.87
CMTM3-204ENST00000562357 CELF3Q5SZQ8 465 aaKnown RBP20.49■□□□□ 0.87
CMTM3-204ENST00000562357 NLRX1Q86UT6 975 aa20.49■□□□□ 0.87
CMTM3-204ENST00000562357 SPATA33Q96N06 139 aa20.49■□□□□ 0.87
CMTM3-204ENST00000562357 CNTNAP5Q8WYK1 1306 aa20.49■□□□□ 0.87
CMTM3-204ENST00000562357 hCG_1984214I3L0E3 225 aa20.48■□□□□ 0.87
CMTM3-204ENST00000562357 NOP56O00567 594 aaKnown RBP20.48■□□□□ 0.87
CMTM3-204ENST00000562357 MEIS2O14770 477 aa20.48■□□□□ 0.87
CMTM3-204ENST00000562357 FIBPO43427 364 aa20.48■□□□□ 0.87
CMTM3-204ENST00000562357 RGS20O76081 388 aa20.48■□□□□ 0.87
CMTM3-204ENST00000562357 UBA1P22314 1058 aaKnown RBP20.48■□□□□ 0.87
CMTM3-204ENST00000562357 NAPAP54920 295 aa20.48■□□□□ 0.87
CMTM3-204ENST00000562357 SMAD3P84022 425 aaKnown RBP20.48■□□□□ 0.87
CMTM3-204ENST00000562357 NEDD9Q14511 834 aa20.48■□□□□ 0.87
CMTM3-204ENST00000562357 ZNF697Q5TEC3 545 aa20.48■□□□□ 0.87
CMTM3-204ENST00000562357 PCNX4Q63HM2 1172 aa20.48■□□□□ 0.87
CMTM3-204ENST00000562357 Q6ZUG5 572 aa20.48■□□□□ 0.87
CMTM3-204ENST00000562357 ZNF713Q8N859 430 aaPredicted RBP20.48■□□□□ 0.87
CMTM3-204ENST00000562357 GPKOWQ92917 476 aaPredicted RBP eCLIP20.48■□□□□ 0.87
CMTM3-204ENST00000562357 ZFP91Q96JP5 570 aaPredicted RBP20.48■□□□□ 0.87
CMTM3-204ENST00000562357 IL23AQ9NPF7 189 aa20.48■□□□□ 0.87
CMTM3-204ENST00000562357 KIAA1217Q5T5P2 1943 aa20.47■□□□□ 0.87
CMTM3-204ENST00000562357 PPFIA4O75335 1185 aa20.47■□□□□ 0.87
CMTM3-204ENST00000562357 CYP2C9P11712 490 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms