RNA–Protein interactions for RNA: ENST00000562173.1

UBR1-203, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-203ENST00000562173 UBR2Q8IWV8 1755 aa7.48□□□□□ -1.21
UBR1-203ENST00000562173 PASKQ96RG2 1323 aa7.48□□□□□ -1.21
UBR1-203ENST00000562173 CNTNAP4Q9C0A0 1308 aa7.48□□□□□ -1.21
UBR1-203ENST00000562173 POLR2AP24928 1970 aaKnown RBP7.48□□□□□ -1.21
UBR1-203ENST00000562173 PRR19A6NJB7 356 aa7.47□□□□□ -1.21
UBR1-203ENST00000562173 CHURC1-FNTBB4DL54 471 aa7.47□□□□□ -1.21
UBR1-203ENST00000562173 LEFTY1O75610 366 aa7.47□□□□□ -1.21
UBR1-203ENST00000562173 MED26O95402 600 aa7.47□□□□□ -1.21
UBR1-203ENST00000562173 TGFB1P01137 390 aa7.47□□□□□ -1.21
UBR1-203ENST00000562173 ZNF865P0CJ78 1059 aaPredicted RBP7.47□□□□□ -1.21
UBR1-203ENST00000562173 VEGFAP15692 232 aaPredicted RBP7.47□□□□□ -1.21
UBR1-203ENST00000562173 GUCY2CP25092 1073 aa7.47□□□□□ -1.21
UBR1-203ENST00000562173 RNF4P78317 190 aa7.47□□□□□ -1.21
UBR1-203ENST00000562173 GRM1Q13255 1194 aa7.47□□□□□ -1.21
UBR1-203ENST00000562173 TNNI3KQ59H18 835 aa7.47□□□□□ -1.21
UBR1-203ENST00000562173 MCF2L2Q86YR7 1114 aa7.47□□□□□ -1.21
UBR1-203ENST00000562173 C2CD5Q86YS7 1000 aa7.47□□□□□ -1.21
UBR1-203ENST00000562173 NLGN1Q8N2Q7 840 aa7.47□□□□□ -1.21
UBR1-203ENST00000562173 PPP1R13LQ8WUF5 828 aa7.47□□□□□ -1.21
UBR1-203ENST00000562173 RNF141Q8WVD5 230 aa7.47□□□□□ -1.21
UBR1-203ENST00000562173 CPLX3Q8WVH0 158 aa7.47□□□□□ -1.21
UBR1-203ENST00000562173 ARMC5Q96C12 935 aa7.47□□□□□ -1.21
UBR1-203ENST00000562173 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.47□□□□□ -1.21
UBR1-203ENST00000562173 CEP131Q9UPN4 1083 aa7.47□□□□□ -1.21
UBR1-203ENST00000562173 ZBTB1Q9Y2K1 713 aa7.47□□□□□ -1.21
UBR1-203ENST00000562173 THSD7BQ9C0I4 1608 aa7.47□□□□□ -1.21
UBR1-203ENST00000562173 SCN4AP35499 1836 aa7.47□□□□□ -1.21
UBR1-203ENST00000562173 TAF1P21675 1872 aa7.47□□□□□ -1.21
UBR1-203ENST00000562173 BCORQ6W2J9 1755 aa7.46□□□□□ -1.21
UBR1-203ENST00000562173 GNAT3A8MTJ3 354 aa7.46□□□□□ -1.22
UBR1-203ENST00000562173 UPK3BL1B0FP48 263 aa7.46□□□□□ -1.22
UBR1-203ENST00000562173 UPK3BL2E5RIL1 263 aa7.46□□□□□ -1.22
UBR1-203ENST00000562173 SSBP05455 408 aaKnown RBP eCLIP7.46□□□□□ -1.22
UBR1-203ENST00000562173 SSTR4P31391 388 aa7.46□□□□□ -1.22
UBR1-203ENST00000562173 DNAJA1P31689 397 aaKnown RBP7.46□□□□□ -1.22
UBR1-203ENST00000562173 SFRP5Q5T4F7 317 aa7.46□□□□□ -1.22
UBR1-203ENST00000562173 FBXW10Q5XX13 1052 aa7.46□□□□□ -1.22
UBR1-203ENST00000562173 CCDC81Q6ZN84 652 aa7.46□□□□□ -1.22
UBR1-203ENST00000562173 FAM214BQ7L5A3 538 aa7.46□□□□□ -1.22
UBR1-203ENST00000562173 XAGE3Q8WTP9 111 aa7.46□□□□□ -1.22
UBR1-203ENST00000562173 POLKQ9UBT6 870 aa7.46□□□□□ -1.22
UBR1-203ENST00000562173 TPX2Q9ULW0 747 aaKnown RBP7.46□□□□□ -1.22
UBR1-203ENST00000562173 CGNL1Q0VF96 1302 aa7.46□□□□□ -1.22
UBR1-203ENST00000562173 TONSLQ96HA7 1378 aa7.46□□□□□ -1.22
UBR1-203ENST00000562173 PDE4DIPQ5VU43 2346 aa7.45□□□□□ -1.22
UBR1-203ENST00000562173 CYP26A1O43174 497 aa7.45□□□□□ -1.22
UBR1-203ENST00000562173 COBLO75128 1261 aa7.45□□□□□ -1.22
UBR1-203ENST00000562173 SERPINB2P05120 415 aa7.45□□□□□ -1.22
UBR1-203ENST00000562173 TBC1D9BQ66K14 1250 aa7.45□□□□□ -1.22
UBR1-203ENST00000562173 ZNF530Q6P9A1 599 aaPredicted RBP7.45□□□□□ -1.22
UBR1-203ENST00000562173 IFNL2Q8IZJ0 200 aa7.45□□□□□ -1.22
UBR1-203ENST00000562173 PIWIL2Q8TC59 973 aaKnown RBP7.45□□□□□ -1.22
UBR1-203ENST00000562173 DHRS1Q96LJ7 313 aa7.45□□□□□ -1.22
UBR1-203ENST00000562173 PCMTD2Q9NV79 361 aa7.45□□□□□ -1.22
UBR1-203ENST00000562173 SIPA1L3O60292 1781 aaPredicted RBP7.45□□□□□ -1.22
UBR1-203ENST00000562173 SOS1Q07889 1333 aaPredicted RBP7.45□□□□□ -1.22
UBR1-203ENST00000562173 KIAA1324LA8MWY0 1029 aaPredicted RBP7.44□□□□□ -1.22
UBR1-203ENST00000562173 TRAF5O00463 557 aa7.44□□□□□ -1.22
UBR1-203ENST00000562173 UBOX5O94941 541 aa7.44□□□□□ -1.22
UBR1-203ENST00000562173 CEACAM5P06731 702 aa7.44□□□□□ -1.22
UBR1-203ENST00000562173 GBP1P32455 592 aa7.44□□□□□ -1.22
UBR1-203ENST00000562173 CLCN7P51798 805 aa7.44□□□□□ -1.22
UBR1-203ENST00000562173 CASP7P55210 303 aa7.44□□□□□ -1.22
UBR1-203ENST00000562173 CHMP4BP1P59074 171 aa7.44□□□□□ -1.22
UBR1-203ENST00000562173 MSMPQ1L6U9 139 aa7.44□□□□□ -1.22
UBR1-203ENST00000562173 CYP4F22Q6NT55 531 aa7.44□□□□□ -1.22
UBR1-203ENST00000562173 SHISA5Q8N114 240 aa7.44□□□□□ -1.22
UBR1-203ENST00000562173 MFSD4AQ8N468 514 aa7.44□□□□□ -1.22
UBR1-203ENST00000562173 SREK1Q8WXA9 508 aaKnown RBP7.44□□□□□ -1.22
UBR1-203ENST00000562173 ZNF622Q969S3 477 aaKnown RBP eCLIP7.44□□□□□ -1.22
UBR1-203ENST00000562173 HEXIM2Q96MH2 286 aaKnown RBP7.44□□□□□ -1.22
UBR1-203ENST00000562173 KIF2CQ99661 725 aa7.44□□□□□ -1.22
UBR1-203ENST00000562173 ANTXR1Q9H6X2 564 aa7.44□□□□□ -1.22
UBR1-203ENST00000562173 COL15A1P39059 1388 aa7.44□□□□□ -1.22
UBR1-203ENST00000562173 CLEC3AO75596 197 aa7.43□□□□□ -1.22
UBR1-203ENST00000562173 ACRP10323 421 aa7.43□□□□□ -1.22
UBR1-203ENST00000562173 CANXP27824 592 aaKnown RBP7.43□□□□□ -1.22
UBR1-203ENST00000562173 OXCT1P55809 520 aa7.43□□□□□ -1.22
UBR1-203ENST00000562173 IFI16Q16666 785 aaKnown RBP7.43□□□□□ -1.22
UBR1-203ENST00000562173 BBS9Q3SYG4 887 aa7.43□□□□□ -1.22
UBR1-203ENST00000562173 MISP3Q96FF7 219 aa7.43□□□□□ -1.22
UBR1-203ENST00000562173 FBXL18Q96ME1 805 aa7.43□□□□□ -1.22
UBR1-203ENST00000562173 KREMEN1Q96MU8 473 aa7.43□□□□□ -1.22
UBR1-203ENST00000562173 TNKS2Q9H2K2 1166 aa7.43□□□□□ -1.22
UBR1-203ENST00000562173 PRKAG3Q9UGI9 489 aa7.43□□□□□ -1.22
UBR1-203ENST00000562173 RNF123Q5XPI4 1314 aa7.43□□□□□ -1.22
UBR1-203ENST00000562173 PRAMEF22A3QJZ6 481 aa7.42□□□□□ -1.22
UBR1-203ENST00000562173 KCNQ3O43525 872 aa7.42□□□□□ -1.22
UBR1-203ENST00000562173 CYP19A1P11511 503 aaPredicted RBP7.42□□□□□ -1.22
UBR1-203ENST00000562173 CTCFP49711 727 aaPredicted RBP7.42□□□□□ -1.22
UBR1-203ENST00000562173 SOX10P56693 466 aa7.42□□□□□ -1.22
UBR1-203ENST00000562173 PRR5LQ6MZQ0 368 aa7.42□□□□□ -1.22
UBR1-203ENST00000562173 TTLL6Q8N841 843 aa7.42□□□□□ -1.22
UBR1-203ENST00000562173 BAHD1Q8TBE0 780 aaPredicted RBP7.42□□□□□ -1.22
UBR1-203ENST00000562173 NETO1Q8TDF5 533 aa7.42□□□□□ -1.22
UBR1-203ENST00000562173 SLC9A7Q96T83 725 aa7.42□□□□□ -1.22
UBR1-203ENST00000562173 TANGO6Q9C0B7 1094 aa7.42□□□□□ -1.22
UBR1-203ENST00000562173 TAF1DQ9H5J8 278 aaPredicted RBP7.42□□□□□ -1.22
UBR1-203ENST00000562173 PHAXQ9H814 394 aaKnown RBP7.42□□□□□ -1.22
UBR1-203ENST00000562173 LRRC4CQ9HCJ2 640 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms