RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 PCNX4Q63HM2 1172 aa12.2□□□□□ -0.46
TPM1-229ENST00000561242 NECAB2Q7Z6G3 386 aa12.2□□□□□ -0.46
TPM1-229ENST00000561242 ANKLE1Q8NAG6 615 aa12.2□□□□□ -0.46
TPM1-229ENST00000561242 ANO3Q9BYT9 981 aa12.2□□□□□ -0.46
TPM1-229ENST00000561242 FLRT1Q9NZU1 646 aa12.2□□□□□ -0.46
TPM1-229ENST00000561242 PRKAG2Q9UGJ0 569 aa12.2□□□□□ -0.46
TPM1-229ENST00000561242 Q9Y3F1 56 aa12.2□□□□□ -0.46
TPM1-229ENST00000561242 MYH4Q9Y623 1939 aa12.19□□□□□ -0.46
TPM1-229ENST00000561242 SNAI1O95863 264 aaPredicted RBP12.19□□□□□ -0.46
TPM1-229ENST00000561242 CYBAP13498 195 aa12.19□□□□□ -0.46
TPM1-229ENST00000561242 SETQ01105 290 aaPredicted RBP12.19□□□□□ -0.46
TPM1-229ENST00000561242 TRIM32Q13049 653 aa12.19□□□□□ -0.46
TPM1-229ENST00000561242 MTMR1Q13613 665 aa12.19□□□□□ -0.46
TPM1-229ENST00000561242 ANO1Q5XXA6 986 aa12.19□□□□□ -0.46
TPM1-229ENST00000561242 TLK2Q86UE8 772 aa12.19□□□□□ -0.46
TPM1-229ENST00000561242 VSIG10LQ86VR7 867 aa12.19□□□□□ -0.46
TPM1-229ENST00000561242 NSUN7Q8NE18 718 aaKnown RBP12.19□□□□□ -0.46
TPM1-229ENST00000561242 DPF3Q92784 378 aa12.19□□□□□ -0.46
TPM1-229ENST00000561242 GLT1D1Q96MS3 346 aa12.19□□□□□ -0.46
TPM1-229ENST00000561242 KIF2CQ99661 725 aa12.19□□□□□ -0.46
TPM1-229ENST00000561242 POLR3EQ9NVU0 708 aa12.19□□□□□ -0.46
TPM1-229ENST00000561242 KCNJ14Q9UNX9 436 aa12.19□□□□□ -0.46
TPM1-229ENST00000561242 GREB1LQ9C091 1923 aaPredicted RBP12.18□□□□□ -0.46
TPM1-229ENST00000561242 MEIS2O14770 477 aa12.18□□□□□ -0.46
TPM1-229ENST00000561242 CABYRO75952 493 aa12.18□□□□□ -0.46
TPM1-229ENST00000561242 FARP2O94887 1054 aaPredicted RBP12.18□□□□□ -0.46
TPM1-229ENST00000561242 GJB2P29033 226 aa12.18□□□□□ -0.46
TPM1-229ENST00000561242 ADCYAP1R1P41586 468 aa12.18□□□□□ -0.46
TPM1-229ENST00000561242 USP11P51784 963 aa12.18□□□□□ -0.46
TPM1-229ENST00000561242 ARHGAP4P98171 946 aa12.18□□□□□ -0.46
TPM1-229ENST00000561242 PKN1Q16512 942 aa12.18□□□□□ -0.46
TPM1-229ENST00000561242 DUSP28Q4G0W2 176 aa12.18□□□□□ -0.46
TPM1-229ENST00000561242 MAP3K21Q5TCX8 1036 aa12.18□□□□□ -0.46
TPM1-229ENST00000561242 PLA2G4DQ86XP0 818 aa12.18□□□□□ -0.46
TPM1-229ENST00000561242 SNX21Q969T3 373 aa12.18□□□□□ -0.46
TPM1-229ENST00000561242 GPRASP2Q96D09 838 aa12.18□□□□□ -0.46
TPM1-229ENST00000561242 PURBQ96QR8 312 aaKnown RBP12.18□□□□□ -0.46
TPM1-229ENST00000561242 VPS37CA5D8V6 355 aaPredicted RBP12.17□□□□□ -0.46
TPM1-229ENST00000561242 JAK2O60674 1132 aa12.17□□□□□ -0.46
TPM1-229ENST00000561242 MYL3P08590 195 aa12.17□□□□□ -0.46
TPM1-229ENST00000561242 ATP2B1P20020 1258 aa12.17□□□□□ -0.46
TPM1-229ENST00000561242 GUCY1B3Q02153 619 aa12.17□□□□□ -0.46
TPM1-229ENST00000561242 GHRHRQ02643 423 aa12.17□□□□□ -0.46
TPM1-229ENST00000561242 DGKDQ16760 1214 aa12.17□□□□□ -0.46
TPM1-229ENST00000561242 SLC35G1Q2M3R5 365 aa12.17□□□□□ -0.46
TPM1-229ENST00000561242 LETM2Q2VYF4 491 aa12.17□□□□□ -0.46
TPM1-229ENST00000561242 CEP55Q53EZ4 464 aa12.17□□□□□ -0.46
TPM1-229ENST00000561242 KRT40Q6A162 431 aa12.17□□□□□ -0.46
TPM1-229ENST00000561242 PIK3AP1Q6ZUJ8 805 aa12.17□□□□□ -0.46
TPM1-229ENST00000561242 DAGLBQ8NCG7 672 aa12.17□□□□□ -0.46
TPM1-229ENST00000561242 TBCKQ8TEA7 893 aa12.17□□□□□ -0.46
TPM1-229ENST00000561242 INTS4Q96HW7 963 aaKnown RBP12.17□□□□□ -0.46
TPM1-229ENST00000561242 SPATA33Q96N06 139 aa12.17□□□□□ -0.46
TPM1-229ENST00000561242 MXRA8Q9BRK3 442 aa12.17□□□□□ -0.46
TPM1-229ENST00000561242 TSEN34Q9BSV6 310 aaKnown RBP12.17□□□□□ -0.46
TPM1-229ENST00000561242 SENP6Q9GZR1 1112 aaPredicted RBP12.17□□□□□ -0.46
TPM1-229ENST00000561242 C11orf49Q9H6J7 331 aa12.17□□□□□ -0.46
TPM1-229ENST00000561242 AZI2Q9H6S1 392 aa12.17□□□□□ -0.46
TPM1-229ENST00000561242 PAK6Q9NQU5 681 aaPredicted RBP12.17□□□□□ -0.46
TPM1-229ENST00000561242 FOXD4L1Q9NU39 408 aa12.17□□□□□ -0.46
TPM1-229ENST00000561242 TMEM260Q9NX78 707 aa12.17□□□□□ -0.46
TPM1-229ENST00000561242 NOD1Q9Y239 953 aa12.17□□□□□ -0.46
TPM1-229ENST00000561242 SAMM50Q9Y512 469 aa12.17□□□□□ -0.46
TPM1-229ENST00000561242 MOXD2PA6NHM9 499 aa12.16□□□□□ -0.46
TPM1-229ENST00000561242 DNM1LO00429 736 aa12.16□□□□□ -0.46
TPM1-229ENST00000561242 TLR3O15455 904 aaKnown RBP12.16□□□□□ -0.46
TPM1-229ENST00000561242 CCNT1O60563 726 aaKnown RBP12.16□□□□□ -0.46
TPM1-229ENST00000561242 LARGE1O95461 756 aa12.16□□□□□ -0.46
TPM1-229ENST00000561242 PGK1P00558 417 aa12.16□□□□□ -0.46
TPM1-229ENST00000561242 MMP1P03956 469 aa12.16□□□□□ -0.46
TPM1-229ENST00000561242 ZNF865P0CJ78 1059 aaPredicted RBP12.16□□□□□ -0.46
TPM1-229ENST00000561242 GCFC2P16383 781 aaKnown RBP12.16□□□□□ -0.46
TPM1-229ENST00000561242 EN2P19622 333 aaPredicted RBP12.16□□□□□ -0.46
TPM1-229ENST00000561242 SREBF1P36956 1147 aa12.16□□□□□ -0.46
TPM1-229ENST00000561242 CAP1Q01518 475 aa12.16□□□□□ -0.46
TPM1-229ENST00000561242 FSCN1Q16658 493 aaKnown RBP12.16□□□□□ -0.46
TPM1-229ENST00000561242 PRR16Q569H4 304 aa12.16□□□□□ -0.46
TPM1-229ENST00000561242 GJC2Q5T442 439 aaPredicted RBP12.16□□□□□ -0.46
TPM1-229ENST00000561242 NEK8Q86SG6 692 aa12.16□□□□□ -0.46
TPM1-229ENST00000561242 DIS3L2Q8IYB7 885 aaKnown RBP12.16□□□□□ -0.46
TPM1-229ENST00000561242 MORC4Q8TE76 937 aa12.16□□□□□ -0.46
TPM1-229ENST00000561242 PGBD1Q96JS3 809 aa12.16□□□□□ -0.46
TPM1-229ENST00000561242 ZNF577Q9BSK1 485 aa12.16□□□□□ -0.46
TPM1-229ENST00000561242 PHF20Q9BVI0 1012 aa12.16□□□□□ -0.46
TPM1-229ENST00000561242 KATNAL1Q9BW62 490 aa12.16□□□□□ -0.46
TPM1-229ENST00000561242 SEZ6LQ9BYH1 1024 aa12.16□□□□□ -0.46
TPM1-229ENST00000561242 JADE2Q9NQC1 790 aa12.16□□□□□ -0.46
TPM1-229ENST00000561242 STARD7Q9NQZ5 370 aa12.16□□□□□ -0.46
TPM1-229ENST00000561242 TBC1D22BQ9NU19 505 aa12.16□□□□□ -0.46
TPM1-229ENST00000561242 PKD2L1Q9P0L9 805 aa12.16□□□□□ -0.46
TPM1-229ENST00000561242 COL20A1Q9P218 1284 aa12.16□□□□□ -0.46
TPM1-229ENST00000561242 ZNF215Q9UL58 517 aaPredicted RBP12.16□□□□□ -0.46
TPM1-229ENST00000561242 NR2E3Q9Y5X4 410 aa12.16□□□□□ -0.46
TPM1-229ENST00000561242 GGPS1O95749 300 aa12.15□□□□□ -0.46
TPM1-229ENST00000561242 SMPD1P17405 629 aa12.15□□□□□ -0.46
TPM1-229ENST00000561242 EDNRBP24530 442 aa12.15□□□□□ -0.46
TPM1-229ENST00000561242 SP4Q02446 784 aa12.15□□□□□ -0.46
TPM1-229ENST00000561242 LY6KQ17RY6 165 aa12.15□□□□□ -0.46
TPM1-229ENST00000561242 FAM47CQ5HY64 1035 aa12.15□□□□□ -0.46
TPM1-229ENST00000561242 NIPA1Q7RTP0 329 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms