RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 NKRFO15226 690 aaKnown RBP eCLIP17.56■□□□□ 0.4
SNRPA1-213ENST00000560856 ASGR1P07306 291 aa17.56■□□□□ 0.4
SNRPA1-213ENST00000560856 TXNP10599 105 aaKnown RBP17.56■□□□□ 0.4
SNRPA1-213ENST00000560856 NAPAP54920 295 aa17.56■□□□□ 0.4
SNRPA1-213ENST00000560856 TTLL4Q14679 1199 aa17.56■□□□□ 0.4
SNRPA1-213ENST00000560856 FSCN1Q16658 493 aaKnown RBP17.56■□□□□ 0.4
SNRPA1-213ENST00000560856 TEX2Q8IWB9 1127 aa17.56■□□□□ 0.4
SNRPA1-213ENST00000560856 PCSK9Q8NBP7 692 aaKnown RBP17.56■□□□□ 0.4
SNRPA1-213ENST00000560856 ZFP91Q96JP5 570 aaPredicted RBP17.56■□□□□ 0.4
SNRPA1-213ENST00000560856 AP5M1Q9H0R1 490 aa17.56■□□□□ 0.4
SNRPA1-213ENST00000560856 DDX41Q9UJV9 622 aaKnown RBP17.56■□□□□ 0.4
SNRPA1-213ENST00000560856 GTF3C3Q9Y5Q9 886 aa17.56■□□□□ 0.4
SNRPA1-213ENST00000560856 KIAA1217Q5T5P2 1943 aa17.56■□□□□ 0.4
SNRPA1-213ENST00000560856 ADAMTS3O15072 1205 aa17.55■□□□□ 0.4
SNRPA1-213ENST00000560856 PFKFB2O60825 505 aa17.55■□□□□ 0.4
SNRPA1-213ENST00000560856 CCND2P30279 289 aa17.55■□□□□ 0.4
SNRPA1-213ENST00000560856 NEK4P51957 841 aa17.55■□□□□ 0.4
SNRPA1-213ENST00000560856 RTP1P59025 263 aa17.55■□□□□ 0.4
SNRPA1-213ENST00000560856 SCRN1Q12765 414 aa17.55■□□□□ 0.4
SNRPA1-213ENST00000560856 STK3Q13188 491 aa17.55■□□□□ 0.4
SNRPA1-213ENST00000560856 LY6KQ17RY6 165 aa17.55■□□□□ 0.4
SNRPA1-213ENST00000560856 C7orf61Q8IZ16 206 aa17.55■□□□□ 0.4
SNRPA1-213ENST00000560856 SLC26A6Q9BXS9 759 aa17.55■□□□□ 0.4
SNRPA1-213ENST00000560856 RBM27Q9P2N5 1060 aaKnown RBP17.55■□□□□ 0.4
SNRPA1-213ENST00000560856 NR2E3Q9Y5X4 410 aa17.55■□□□□ 0.4
SNRPA1-213ENST00000560856 ELP1O95163 1332 aa17.54■□□□□ 0.4
SNRPA1-213ENST00000560856 ESYT2A0FGR8 921 aa17.54■□□□□ 0.4
SNRPA1-213ENST00000560856 SMCO2A6NFE2 343 aa17.54■□□□□ 0.4
SNRPA1-213ENST00000560856 A6NJR5 290 aa17.54■□□□□ 0.4
SNRPA1-213ENST00000560856 RBM25P49756 843 aaKnown RBP17.54■□□□□ 0.4
SNRPA1-213ENST00000560856 CLK2P49760 499 aaKnown RBP17.54■□□□□ 0.4
SNRPA1-213ENST00000560856 ARHGAP1Q07960 439 aa17.54■□□□□ 0.4
SNRPA1-213ENST00000560856 SEMA3FQ13275 785 aa17.54■□□□□ 0.4
SNRPA1-213ENST00000560856 ANKRD1Q15327 319 aa17.54■□□□□ 0.4
SNRPA1-213ENST00000560856 OR6J1Q8NGC5 347 aa17.54■□□□□ 0.4
SNRPA1-213ENST00000560856 INPP4AQ96PE3 977 aaPredicted RBP17.54■□□□□ 0.4
SNRPA1-213ENST00000560856 PCDHA6Q9UN73 950 aa17.54■□□□□ 0.4
SNRPA1-213ENST00000560856 PCDHA8Q9Y5H6 950 aa17.54■□□□□ 0.4
SNRPA1-213ENST00000560856 GRIN2DO15399 1336 aa17.53■□□□□ 0.4
SNRPA1-213ENST00000560856 LARGE1O95461 756 aa17.53■□□□□ 0.4
SNRPA1-213ENST00000560856 ICAM3P32942 547 aa17.53■□□□□ 0.4
SNRPA1-213ENST00000560856 CDK7P50613 346 aa17.53■□□□□ 0.4
SNRPA1-213ENST00000560856 ADCY7P51828 1080 aa17.53■□□□□ 0.4
SNRPA1-213ENST00000560856 SP2Q02086 613 aa17.53■□□□□ 0.4
SNRPA1-213ENST00000560856 ME3Q16798 604 aa17.53■□□□□ 0.4
SNRPA1-213ENST00000560856 TRIM60Q495X7 471 aa17.53■□□□□ 0.4
SNRPA1-213ENST00000560856 PCNX4Q63HM2 1172 aa17.53■□□□□ 0.4
SNRPA1-213ENST00000560856 XRRA1Q6P2D8 792 aa17.53■□□□□ 0.4
SNRPA1-213ENST00000560856 CXCL17Q6UXB2 119 aa17.53■□□□□ 0.4
SNRPA1-213ENST00000560856 C22orf23Q9BZE7 217 aa17.53■□□□□ 0.4
SNRPA1-213ENST00000560856 ZMYND12Q9H0C1 365 aa17.53■□□□□ 0.4
SNRPA1-213ENST00000560856 STARD7Q9NQZ5 370 aa17.53■□□□□ 0.4
SNRPA1-213ENST00000560856 STAM2O75886 525 aa17.52■□□□□ 0.4
SNRPA1-213ENST00000560856 CTDNEP1O95476 244 aa17.52■□□□□ 0.4
SNRPA1-213ENST00000560856 GH1P01241 217 aa17.52■□□□□ 0.4
SNRPA1-213ENST00000560856 TGFB3P10600 412 aa17.52■□□□□ 0.4
SNRPA1-213ENST00000560856 SSRP1Q08945 709 aaKnown RBP17.52■□□□□ 0.4
SNRPA1-213ENST00000560856 SLC43A3Q8NBI5 491 aa17.52■□□□□ 0.4
SNRPA1-213ENST00000560856 EMID1Q96A84 441 aaPredicted RBP17.52■□□□□ 0.4
SNRPA1-213ENST00000560856 GLT1D1Q96MS3 346 aa17.52■□□□□ 0.4
SNRPA1-213ENST00000560856 SLKQ9H2G2 1235 aaPredicted RBP17.52■□□□□ 0.4
SNRPA1-213ENST00000560856 BCAS3Q9H6U6 928 aa17.52■□□□□ 0.4
SNRPA1-213ENST00000560856 TMEM260Q9NX78 707 aa17.52■□□□□ 0.4
SNRPA1-213ENST00000560856 RTEL1Q9NZ71 1219 aa17.52■□□□□ 0.4
SNRPA1-213ENST00000560856 MRVI1Q9Y6F6 885 aa17.52■□□□□ 0.4
SNRPA1-213ENST00000560856 SPATA31C2B4DYI2 1134 aa17.51■□□□□ 0.39
SNRPA1-213ENST00000560856 CPLX1O14810 134 aa17.51■□□□□ 0.39
SNRPA1-213ENST00000560856 PURAQ00577 322 aaKnown RBP17.51■□□□□ 0.39
SNRPA1-213ENST00000560856 AKAP17AQ02040 695 aaKnown RBP17.51■□□□□ 0.39
SNRPA1-213ENST00000560856 TLE2Q04725 743 aa17.51■□□□□ 0.39
SNRPA1-213ENST00000560856 KCNV1Q6PIU1 500 aa17.51■□□□□ 0.39
SNRPA1-213ENST00000560856 ANKRD33Q7Z3H0 272 aa17.51■□□□□ 0.39
SNRPA1-213ENST00000560856 AFG1LQ8WV93 481 aa17.51■□□□□ 0.39
SNRPA1-213ENST00000560856 PGBD1Q96JS3 809 aa17.51■□□□□ 0.39
SNRPA1-213ENST00000560856 GLT8D2Q9H1C3 349 aa17.51■□□□□ 0.39
SNRPA1-213ENST00000560856 PCDH10Q9P2E7 1040 aa17.51■□□□□ 0.39
SNRPA1-213ENST00000560856 ZMYND8Q9ULU4 1186 aaPredicted RBP17.51■□□□□ 0.39
SNRPA1-213ENST00000560856 ATP11BQ9Y2G3 1177 aa17.51■□□□□ 0.39
SNRPA1-213ENST00000560856 UBIAD1Q9Y5Z9 338 aa17.51■□□□□ 0.39
SNRPA1-213ENST00000560856 SPDYE3A6NKU9 549 aa17.5■□□□□ 0.39
SNRPA1-213ENST00000560856 ZEB2O60315 1214 aa17.5■□□□□ 0.39
SNRPA1-213ENST00000560856 DTNBO60941 627 aa17.5■□□□□ 0.39
SNRPA1-213ENST00000560856 CABYRO75952 493 aa17.5■□□□□ 0.39
SNRPA1-213ENST00000560856 FOSP01100 380 aaPredicted RBP17.5■□□□□ 0.39
SNRPA1-213ENST00000560856 ITGB5P18084 799 aa17.5■□□□□ 0.39
SNRPA1-213ENST00000560856 UBA1P22314 1058 aaKnown RBP17.5■□□□□ 0.39
SNRPA1-213ENST00000560856 CPT1AP50416 773 aa17.5■□□□□ 0.39
SNRPA1-213ENST00000560856 ST3GAL1Q11201 340 aa17.5■□□□□ 0.39
SNRPA1-213ENST00000560856 CELF3Q5SZQ8 465 aaKnown RBP17.5■□□□□ 0.39
SNRPA1-213ENST00000560856 MYSM1Q5VVJ2 828 aa17.5■□□□□ 0.39
SNRPA1-213ENST00000560856 NECAB1Q8N987 351 aa17.5■□□□□ 0.39
SNRPA1-213ENST00000560856 CRYGNQ8WXF5 182 aa17.5■□□□□ 0.39
SNRPA1-213ENST00000560856 TOX2Q96NM4 488 aa17.5■□□□□ 0.39
SNRPA1-213ENST00000560856 AIFM3Q96NN9 605 aa17.5■□□□□ 0.39
SNRPA1-213ENST00000560856 ANO3Q9BYT9 981 aa17.5■□□□□ 0.39
SNRPA1-213ENST00000560856 PRO3102Q9H379 93 aa17.5■□□□□ 0.39
SNRPA1-213ENST00000560856 SH3GLB2Q9NR46 395 aa17.5■□□□□ 0.39
SNRPA1-213ENST00000560856 VPS54Q9P1Q0 977 aa17.5■□□□□ 0.39
SNRPA1-213ENST00000560856 A0A0U1RQG5 324 aaPredicted RBP17.49■□□□□ 0.39
SNRPA1-213ENST00000560856 ARVCFO00192 962 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms