RNA–Protein interactions for RNA: ENST00000560674.5

SYNM-203, Transcript of synemin, humanhuman

TSL 1 (best) BASIC

Gene SYNM, Length 5,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-203ENST00000560674 HDAC11Q96DB2 347 aa13.75□□□□□ -0.21
SYNM-203ENST00000560674 RWDD2AQ9UIY3 292 aa13.75□□□□□ -0.21
SYNM-203ENST00000560674 TMEM232C9JQI7 657 aa13.75□□□□□ -0.21
SYNM-203ENST00000560674 SPECC1L-ADORA2AF8WAN1 911 aa13.75□□□□□ -0.21
SYNM-203ENST00000560674 MYL1P05976 194 aa13.75□□□□□ -0.21
SYNM-203ENST00000560674 SCYL3Q8IZE3 742 aa13.75□□□□□ -0.21
SYNM-203ENST00000560674 CNOT10Q9H9A5 744 aaKnown RBP13.75□□□□□ -0.21
SYNM-203ENST00000560674 SUGCTQ9HAC7 445 aa13.75□□□□□ -0.21
SYNM-203ENST00000560674 TLR7Q9NYK1 1049 aaKnown RBP13.75□□□□□ -0.21
SYNM-203ENST00000560674 IPO11Q9UI26 975 aaKnown RBP13.75□□□□□ -0.21
SYNM-203ENST00000560674 PCDHB4Q9Y5E5 795 aa13.75□□□□□ -0.21
SYNM-203ENST00000560674 TARBP1Q13395 1621 aaKnown RBP13.75□□□□□ -0.21
SYNM-203ENST00000560674 SOWAHDA6NJG2 315 aa13.75□□□□□ -0.21
SYNM-203ENST00000560674 M0R2C6 588 aa13.75□□□□□ -0.21
SYNM-203ENST00000560674 SORBS3O60504 671 aa13.75□□□□□ -0.21
SYNM-203ENST00000560674 SGO2Q562F6 1265 aa13.75□□□□□ -0.21
SYNM-203ENST00000560674 VSTM4Q8IW00 320 aa13.75□□□□□ -0.21
SYNM-203ENST00000560674 ENOX1Q8TC92 643 aaKnown RBP13.75□□□□□ -0.21
SYNM-203ENST00000560674 PBKQ96KB5 322 aa13.75□□□□□ -0.21
SYNM-203ENST00000560674 PARD6BQ9BYG5 372 aa13.75□□□□□ -0.21
SYNM-203ENST00000560674 THEGQ9P2T0 379 aa13.75□□□□□ -0.21
SYNM-203ENST00000560674 CD2BP2O95400 341 aaKnown RBP13.75□□□□□ -0.21
SYNM-203ENST00000560674 ADORA1P30542 326 aa13.75□□□□□ -0.21
SYNM-203ENST00000560674 PABPC4Q13310 644 aaKnown RBP eCLIP13.75□□□□□ -0.21
SYNM-203ENST00000560674 ZKSCAN8Q15776 578 aaPredicted RBP13.75□□□□□ -0.21
SYNM-203ENST00000560674 PTPN21Q16825 1174 aa13.75□□□□□ -0.21
SYNM-203ENST00000560674 FAM186BQ8IYM0 893 aa13.75□□□□□ -0.21
SYNM-203ENST00000560674 ZNF526Q8TF50 670 aaPredicted RBP13.75□□□□□ -0.21
SYNM-203ENST00000560674 TCP11Q8WWU5 503 aa13.75□□□□□ -0.21
SYNM-203ENST00000560674 DNAJC5BQ9UF47 199 aa13.75□□□□□ -0.21
SYNM-203ENST00000560674 KDM5CP41229 1560 aa13.74□□□□□ -0.21
SYNM-203ENST00000560674 A0A087WUV0 522 aaPredicted RBP13.74□□□□□ -0.21
SYNM-203ENST00000560674 FRMD3A2A2Y4 597 aa13.74□□□□□ -0.21
SYNM-203ENST00000560674 PRPSAP1Q14558 356 aa13.74□□□□□ -0.21
SYNM-203ENST00000560674 TMTC3Q6ZXV5 915 aa13.74□□□□□ -0.21
SYNM-203ENST00000560674 ZNF589Q86UQ0 364 aaPredicted RBP13.74□□□□□ -0.21
SYNM-203ENST00000560674 SPDYE16A6NNV3 312 aaPredicted RBP13.74□□□□□ -0.21
SYNM-203ENST00000560674 CTNND1O60716 968 aaKnown RBP13.74□□□□□ -0.21
SYNM-203ENST00000560674 MOCS3O95396 460 aa13.74□□□□□ -0.21
SYNM-203ENST00000560674 SPDYE2Q495Y8 402 aa13.74□□□□□ -0.21
SYNM-203ENST00000560674 ASPRV1Q53RT3 343 aa13.74□□□□□ -0.21
SYNM-203ENST00000560674 LRCH2Q5VUJ6 765 aa13.74□□□□□ -0.21
SYNM-203ENST00000560674 SMCR8Q8TEV9 937 aaPredicted RBP13.74□□□□□ -0.21
SYNM-203ENST00000560674 EXOC4Q96A65 974 aa13.74□□□□□ -0.21
SYNM-203ENST00000560674 GREM2Q9H772 168 aa13.74□□□□□ -0.21
SYNM-203ENST00000560674 NRBP2Q9NSY0 501 aa13.74□□□□□ -0.21
SYNM-203ENST00000560674 RPSAP08865 295 aaKnown RBP13.74□□□□□ -0.21
SYNM-203ENST00000560674 TMOD1P28289 359 aa13.74□□□□□ -0.21
SYNM-203ENST00000560674 FKBP3Q00688 224 aaKnown RBP13.74□□□□□ -0.21
SYNM-203ENST00000560674 AP1ARQ63HQ0 302 aa13.74□□□□□ -0.21
SYNM-203ENST00000560674 SPDL1Q96EA4 605 aa13.74□□□□□ -0.21
SYNM-203ENST00000560674 NCAPGQ9BPX3 1015 aa13.74□□□□□ -0.21
SYNM-203ENST00000560674 AMNQ9BXJ7 453 aa13.74□□□□□ -0.21
SYNM-203ENST00000560674 HNRNPDLO14979 420 aaKnown RBP13.74□□□□□ -0.21
SYNM-203ENST00000560674 PPFIA2O75334 1257 aa13.74□□□□□ -0.21
SYNM-203ENST00000560674 MMP1P03956 469 aa13.74□□□□□ -0.21
SYNM-203ENST00000560674 DHX9Q08211 1270 aaKnown RBP13.74□□□□□ -0.21
SYNM-203ENST00000560674 NNTQ13423 1086 aa13.74□□□□□ -0.21
SYNM-203ENST00000560674 TMED2Q15363 201 aa13.74□□□□□ -0.21
SYNM-203ENST00000560674 FAM98CQ17RN3 349 aaKnown RBP13.74□□□□□ -0.21
SYNM-203ENST00000560674 GRAMD1CQ8IYS0 662 aa13.74□□□□□ -0.21
SYNM-203ENST00000560674 ANAPC5Q9UJX4 755 aa13.74□□□□□ -0.21
SYNM-203ENST00000560674 HSPA6P17066 643 aa13.74□□□□□ -0.21
SYNM-203ENST00000560674 ANKRD20A4Q4UJ75 823 aa13.74□□□□□ -0.21
SYNM-203ENST00000560674 ANKRD20A8PQ5CZ79 823 aa13.74□□□□□ -0.21
SYNM-203ENST00000560674 ANKRD20A2Q5SQ80 823 aa13.74□□□□□ -0.21
SYNM-203ENST00000560674 ANKRD20A1Q5TYW2 823 aa13.74□□□□□ -0.21
SYNM-203ENST00000560674 DISC1Q9NRI5 854 aa13.74□□□□□ -0.21
SYNM-203ENST00000560674 SCNN1DP51172 638 aa13.73□□□□□ -0.21
SYNM-203ENST00000560674 LRRC41Q15345 812 aa13.73□□□□□ -0.21
SYNM-203ENST00000560674 TCP11X2Q5H9J9 407 aa13.73□□□□□ -0.21
SYNM-203ENST00000560674 KLHL29Q96CT2 875 aa13.73□□□□□ -0.21
SYNM-203ENST00000560674 PAGR1Q9BTK6 254 aa13.73□□□□□ -0.21
SYNM-203ENST00000560674 NHEJ1Q9H9Q4 299 aaPredicted RBP13.73□□□□□ -0.21
SYNM-203ENST00000560674 FTCDO95954 541 aa13.73□□□□□ -0.21
SYNM-203ENST00000560674 CLCN6P51797 869 aa13.73□□□□□ -0.21
SYNM-203ENST00000560674 ZBED6P86452 979 aa13.73□□□□□ -0.21
SYNM-203ENST00000560674 SNX1Q13596 522 aa13.73□□□□□ -0.21
SYNM-203ENST00000560674 GPATCH4Q5T3I0 446 aaKnown RBP13.73□□□□□ -0.21
SYNM-203ENST00000560674 LRRC43Q8N309 656 aa13.73□□□□□ -0.21
SYNM-203ENST00000560674 RASGRP4Q8TDF6 673 aa13.73□□□□□ -0.21
SYNM-203ENST00000560674 THAP9Q9H5L6 903 aa13.73□□□□□ -0.21
SYNM-203ENST00000560674 IFT122Q9HBG6 1241 aa13.73□□□□□ -0.21
SYNM-203ENST00000560674 ATP7AQ04656 1500 aa13.73□□□□□ -0.21
SYNM-203ENST00000560674 MSH2P43246 934 aa13.73□□□□□ -0.21
SYNM-203ENST00000560674 E2F5Q15329 346 aa13.73□□□□□ -0.21
SYNM-203ENST00000560674 C10orf76Q5T2E6 689 aa13.73□□□□□ -0.21
SYNM-203ENST00000560674 ALS2CLQ60I27 953 aa13.73□□□□□ -0.21
SYNM-203ENST00000560674 FAM133AQ8N9E0 248 aa13.73□□□□□ -0.21
SYNM-203ENST00000560674 PLEKHF1Q96S99 279 aa13.73□□□□□ -0.21
SYNM-203ENST00000560674 FTOQ9C0B1 505 aaKnown RBP eCLIP13.73□□□□□ -0.21
SYNM-203ENST00000560674 CCPG1Q9ULG6 757 aa13.73□□□□□ -0.21
SYNM-203ENST00000560674 MAP3K15Q6ZN16 1313 aa13.73□□□□□ -0.21
SYNM-203ENST00000560674 LMTK3Q96Q04 1460 aa13.73□□□□□ -0.21
SYNM-203ENST00000560674 GOLGA8CPA6NN73 597 aa13.73□□□□□ -0.21
SYNM-203ENST00000560674 CXCR5P32302 372 aa13.73□□□□□ -0.21
SYNM-203ENST00000560674 ADCY1Q08828 1119 aa13.73□□□□□ -0.21
SYNM-203ENST00000560674 FAM160B1Q5W0V3 765 aa13.73□□□□□ -0.21
SYNM-203ENST00000560674 CYP4F22Q6NT55 531 aa13.73□□□□□ -0.21
SYNM-203ENST00000560674 RAPH1Q70E73 1250 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms