RNA–Protein interactions for RNA: ENST00000560641.5

PBX1-219, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-219ENST00000560641 INCENPQ9NQS7 918 aa17.71■□□□□ 0.43
PBX1-219ENST00000560641 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.71■□□□□ 0.43
PBX1-219ENST00000560641 AXIN2Q9Y2T1 843 aa17.71■□□□□ 0.43
PBX1-219ENST00000560641 CCT8L1PA6NM43 557 aa17.7■□□□□ 0.42
PBX1-219ENST00000560641 PLEKP08567 350 aaPredicted RBP17.7■□□□□ 0.42
PBX1-219ENST00000560641 STAT6P42226 847 aa17.7■□□□□ 0.42
PBX1-219ENST00000560641 KIAA0753Q2KHM9 967 aa17.7■□□□□ 0.42
PBX1-219ENST00000560641 C14orf37Q86TY3 774 aa17.7■□□□□ 0.42
PBX1-219ENST00000560641 CCDC84Q86UT8 332 aaPredicted RBP17.7■□□□□ 0.42
PBX1-219ENST00000560641 PPANQ9NQ55 473 aaKnown RBP17.7■□□□□ 0.42
PBX1-219ENST00000560641 CCNHP51946 323 aaPredicted RBP17.7■□□□□ 0.42
PBX1-219ENST00000560641 ERMARDQ5T6L9 678 aa17.7■□□□□ 0.42
PBX1-219ENST00000560641 USP38Q8NB14 1042 aa17.7■□□□□ 0.42
PBX1-219ENST00000560641 EHD2Q9NZN4 543 aa17.7■□□□□ 0.42
PBX1-219ENST00000560641 F8W031 263 aaPredicted RBP17.7■□□□□ 0.42
PBX1-219ENST00000560641 MATR3P43243 847 aaKnown RBP eCLIP17.7■□□□□ 0.42
PBX1-219ENST00000560641 MAGEA1P43355 309 aa17.7■□□□□ 0.42
PBX1-219ENST00000560641 NAB2Q15742 525 aa17.7■□□□□ 0.42
PBX1-219ENST00000560641 LPIN2Q92539 896 aa17.7■□□□□ 0.42
PBX1-219ENST00000560641 CNKSR1Q969H4 720 aa17.7■□□□□ 0.42
PBX1-219ENST00000560641 ACSBG1Q96GR2 724 aa17.7■□□□□ 0.42
PBX1-219ENST00000560641 SCLT1Q96NL6 688 aa17.7■□□□□ 0.42
PBX1-219ENST00000560641 NUCKS1Q9H1E3 243 aaKnown RBP17.7■□□□□ 0.42
PBX1-219ENST00000560641 SMARCAL1Q9NZC9 954 aa17.7■□□□□ 0.42
PBX1-219ENST00000560641 TRIM37O94972 964 aa17.69■□□□□ 0.42
PBX1-219ENST00000560641 GBP2P32456 591 aaPredicted RBP17.69■□□□□ 0.42
PBX1-219ENST00000560641 PIGWQ7Z7B1 504 aa17.69■□□□□ 0.42
PBX1-219ENST00000560641 SCFD2Q8WU76 684 aa17.69■□□□□ 0.42
PBX1-219ENST00000560641 NOC4LQ9BVI4 516 aaKnown RBP17.69■□□□□ 0.42
PBX1-219ENST00000560641 TNS2Q63HR2 1409 aa17.69■□□□□ 0.42
PBX1-219ENST00000560641 DDAH1O94760 285 aa17.69■□□□□ 0.42
PBX1-219ENST00000560641 HGSNATQ68CP4 663 aa17.69■□□□□ 0.42
PBX1-219ENST00000560641 RAPGEF4Q8WZA2 1011 aa17.69■□□□□ 0.42
PBX1-219ENST00000560641 ZNF317Q96PQ6 595 aaPredicted RBP17.69■□□□□ 0.42
PBX1-219ENST00000560641 CORO1CQ9ULV4 474 aaPredicted RBP17.69■□□□□ 0.42
PBX1-219ENST00000560641 A0A0G2JS52 829 aa17.68■□□□□ 0.42
PBX1-219ENST00000560641 SMNDC1O75940 238 aaKnown RBP eCLIP17.68■□□□□ 0.42
PBX1-219ENST00000560641 CXCR5P32302 372 aa17.68■□□□□ 0.42
PBX1-219ENST00000560641 HINFPQ9BQA5 517 aa17.68■□□□□ 0.42
PBX1-219ENST00000560641 TRPC6Q9Y210 931 aa17.68■□□□□ 0.42
PBX1-219ENST00000560641 MYH7BA7E2Y1 1941 aa17.68■□□□□ 0.42
PBX1-219ENST00000560641 NCK2O43639 380 aa17.68■□□□□ 0.42
PBX1-219ENST00000560641 TATP17735 454 aaPredicted RBP17.68■□□□□ 0.42
PBX1-219ENST00000560641 VWA3BQ502W6 1294 aa17.68■□□□□ 0.42
PBX1-219ENST00000560641 MSL1Q68DK7 614 aa17.68■□□□□ 0.42
PBX1-219ENST00000560641 TYW1BQ6NUM6 668 aa17.68■□□□□ 0.42
PBX1-219ENST00000560641 BZW1Q7L1Q6 419 aaKnown RBP17.68■□□□□ 0.42
PBX1-219ENST00000560641 ACTRT1Q8TDG2 376 aa17.68■□□□□ 0.42
PBX1-219ENST00000560641 CHMP6Q96FZ7 201 aa17.68■□□□□ 0.42
PBX1-219ENST00000560641 NACAP1Q9BZK3 213 aa17.68■□□□□ 0.42
PBX1-219ENST00000560641 FAM129AQ9BZQ8 928 aa17.68■□□□□ 0.42
PBX1-219ENST00000560641 SPATS2LQ9NUQ6 558 aaKnown RBP17.68■□□□□ 0.42
PBX1-219ENST00000560641 TAOK2Q9UL54 1235 aa17.68■□□□□ 0.42
PBX1-219ENST00000560641 CNTNAP5Q8WYK1 1306 aa17.68■□□□□ 0.42
PBX1-219ENST00000560641 ZSCAN5CA6NGD5 496 aaPredicted RBP17.68■□□□□ 0.42
PBX1-219ENST00000560641 RAD51CO43502 376 aa17.68■□□□□ 0.42
PBX1-219ENST00000560641 FGRP09769 529 aa17.68■□□□□ 0.42
PBX1-219ENST00000560641 PCP11498 1178 aaKnown RBP17.68■□□□□ 0.42
PBX1-219ENST00000560641 PDXDC1Q6P996 788 aa17.68■□□□□ 0.42
PBX1-219ENST00000560641 MAATS1Q7Z4T9 603 aa17.68■□□□□ 0.42
PBX1-219ENST00000560641 C2CD5Q86YS7 1000 aa17.68■□□□□ 0.42
PBX1-219ENST00000560641 TTLL11Q8NHH1 800 aa17.68■□□□□ 0.42
PBX1-219ENST00000560641 IFT81Q8WYA0 676 aa17.68■□□□□ 0.42
PBX1-219ENST00000560641 MS4A14Q96JA4 679 aa17.68■□□□□ 0.42
PBX1-219ENST00000560641 C7orf25Q9BPX7 421 aa17.68■□□□□ 0.42
PBX1-219ENST00000560641 CNOT8Q9UFF9 292 aaKnown RBP17.68■□□□□ 0.42
PBX1-219ENST00000560641 LAMB1P07942 1786 aa17.67■□□□□ 0.42
PBX1-219ENST00000560641 LAD1O00515 517 aa17.67■□□□□ 0.42
PBX1-219ENST00000560641 EIF3BP55884 814 aaKnown RBP17.67■□□□□ 0.42
PBX1-219ENST00000560641 ERVK-9P63128 1117 aa17.67■□□□□ 0.42
PBX1-219ENST00000560641 SARNPP82979 210 aaKnown RBP17.67■□□□□ 0.42
PBX1-219ENST00000560641 ANKRD40Q6AI12 368 aa17.67■□□□□ 0.42
PBX1-219ENST00000560641 OPLAHO14841 1288 aa17.67■□□□□ 0.42
PBX1-219ENST00000560641 ZBTB48P10074 688 aaPredicted RBP17.67■□□□□ 0.42
PBX1-219ENST00000560641 PRPHP41219 470 aa17.67■□□□□ 0.42
PBX1-219ENST00000560641 GUCY2FP51841 1108 aa17.67■□□□□ 0.42
PBX1-219ENST00000560641 IFIT5Q13325 482 aaKnown RBP17.67■□□□□ 0.42
PBX1-219ENST00000560641 TMTC3Q6ZXV5 915 aa17.67■□□□□ 0.42
PBX1-219ENST00000560641 LMBR1Q8WVP7 490 aa17.67■□□□□ 0.42
PBX1-219ENST00000560641 MAPK8IP1Q9UQF2 711 aa17.67■□□□□ 0.42
PBX1-219ENST00000560641 CENPPQ6IPU0 288 aa17.66■□□□□ 0.42
PBX1-219ENST00000560641 APLFQ8IW19 511 aaPredicted RBP17.66■□□□□ 0.42
PBX1-219ENST00000560641 CMTR1Q8N1G2 835 aaKnown RBP17.66■□□□□ 0.42
PBX1-219ENST00000560641 KRT12Q99456 494 aa17.66■□□□□ 0.42
PBX1-219ENST00000560641 TXLNGYQ9BZA5 131 aa17.66■□□□□ 0.42
PBX1-219ENST00000560641 LUC7LQ9NQ29 371 aaKnown RBP17.66■□□□□ 0.42
PBX1-219ENST00000560641 AFF2P51816 1311 aa17.66■□□□□ 0.42
PBX1-219ENST00000560641 MRPS25P82663 173 aaKnown RBP17.66■□□□□ 0.42
PBX1-219ENST00000560641 ACCSLQ4AC99 568 aa17.66■□□□□ 0.42
PBX1-219ENST00000560641 CCDC197Q8NCU1 140 aa17.66■□□□□ 0.42
PBX1-219ENST00000560641 NSMCE1Q8WV22 266 aa17.66■□□□□ 0.42
PBX1-219ENST00000560641 SPAG5Q96R06 1193 aa17.66■□□□□ 0.42
PBX1-219ENST00000560641 ESYT3A0FGR9 886 aa17.66■□□□□ 0.42
PBX1-219ENST00000560641 AKR1B10O60218 316 aa17.66■□□□□ 0.42
PBX1-219ENST00000560641 IDH1O75874 414 aaKnown RBP17.66■□□□□ 0.42
PBX1-219ENST00000560641 MBD4O95243 580 aa17.66■□□□□ 0.42
PBX1-219ENST00000560641 FGFR2P21802 821 aa17.66■□□□□ 0.42
PBX1-219ENST00000560641 FAM69CQ0P6D2 419 aa17.66■□□□□ 0.42
PBX1-219ENST00000560641 NAA25Q14CX7 972 aa17.66■□□□□ 0.42
PBX1-219ENST00000560641 MIS18BP1Q6P0N0 1132 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms