RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 TMEM67Q5HYA8 995 aa9.52□□□□□ -0.89
CCDC33-209ENST00000560565 LDLRAD1Q5T700 205 aa9.52□□□□□ -0.89
CCDC33-209ENST00000560565 PAPD7Q5XG87 772 aaKnown RBP9.52□□□□□ -0.89
CCDC33-209ENST00000560565 CDC42EP5Q6NZY7 148 aa9.52□□□□□ -0.89
CCDC33-209ENST00000560565 YTHDF3Q7Z739 585 aaKnown RBP9.52□□□□□ -0.89
CCDC33-209ENST00000560565 FAM83AQ86UY5 434 aa9.52□□□□□ -0.89
CCDC33-209ENST00000560565 RASAL3Q86YV0 1011 aa9.52□□□□□ -0.89
CCDC33-209ENST00000560565 TBC1D10CQ8IV04 446 aa9.52□□□□□ -0.89
CCDC33-209ENST00000560565 TEX11Q8IYF3 940 aa9.52□□□□□ -0.89
CCDC33-209ENST00000560565 REM2Q8IYK8 340 aaPredicted RBP9.52□□□□□ -0.89
CCDC33-209ENST00000560565 ARFGAP2Q8N6H7 521 aa9.52□□□□□ -0.89
CCDC33-209ENST00000560565 LRRN4CLQ8ND94 238 aa9.52□□□□□ -0.89
CCDC33-209ENST00000560565 C1orf131Q8NDD1 294 aaKnown RBP9.52□□□□□ -0.89
CCDC33-209ENST00000560565 OR8K1Q8NGG5 319 aa9.52□□□□□ -0.89
CCDC33-209ENST00000560565 CAGE1Q8TC20 777 aa9.52□□□□□ -0.89
CCDC33-209ENST00000560565 ESR2Q92731 530 aa9.52□□□□□ -0.89
CCDC33-209ENST00000560565 P3H4Q92791 437 aa9.52□□□□□ -0.89
CCDC33-209ENST00000560565 SLC10A4Q96EP9 437 aa9.52□□□□□ -0.89
CCDC33-209ENST00000560565 TEPSINQ96N21 525 aa9.52□□□□□ -0.89
CCDC33-209ENST00000560565 ALS2CR12Q96Q35 445 aa9.52□□□□□ -0.89
CCDC33-209ENST00000560565 NUP88Q99567 741 aaPredicted RBP9.52□□□□□ -0.89
CCDC33-209ENST00000560565 RNF26Q9BY78 433 aaPredicted RBP9.52□□□□□ -0.89
CCDC33-209ENST00000560565 TMEM39BQ9GZU3 492 aa9.52□□□□□ -0.89
CCDC33-209ENST00000560565 A1CFQ9NQ94 594 aaKnown RBP9.52□□□□□ -0.89
CCDC33-209ENST00000560565 ABHD10Q9NUJ1 306 aa9.52□□□□□ -0.89
CCDC33-209ENST00000560565 USP40Q9NVE5 1235 aa9.52□□□□□ -0.89
CCDC33-209ENST00000560565 GOLGA6AQ9NYA3 693 aa9.52□□□□□ -0.89
CCDC33-209ENST00000560565 PUF60Q9UHX1 559 aaKnown RBP9.52□□□□□ -0.89
CCDC33-209ENST00000560565 FBXO2Q9UK22 296 aaPredicted RBP9.52□□□□□ -0.89
CCDC33-209ENST00000560565 FZD1Q9UP38 647 aa9.52□□□□□ -0.89
CCDC33-209ENST00000560565 THSD7BQ9C0I4 1608 aa9.52□□□□□ -0.89
CCDC33-209ENST00000560565 COL2A1P02458 1487 aaPredicted RBP9.52□□□□□ -0.89
CCDC33-209ENST00000560565 UNC80Q8N2C7 3258 aa9.51□□□□□ -0.89
CCDC33-209ENST00000560565 BICDL2A1A5D9 508 aa9.51□□□□□ -0.89
CCDC33-209ENST00000560565 UNCXA6NJT0 531 aa9.51□□□□□ -0.89
CCDC33-209ENST00000560565 MINDY4BA8MYZ0 360 aa9.51□□□□□ -0.89
CCDC33-209ENST00000560565 KIF28PB7ZC32 967 aa9.51□□□□□ -0.89
CCDC33-209ENST00000560565 USP17L12C9JPN9 530 aa9.51□□□□□ -0.89
CCDC33-209ENST00000560565 TMEM232C9JQI7 657 aa9.51□□□□□ -0.89
CCDC33-209ENST00000560565 USP17L21D6R901 530 aa9.51□□□□□ -0.89
CCDC33-209ENST00000560565 CA12O43570 354 aa9.51□□□□□ -0.89
CCDC33-209ENST00000560565 HSF2BPO75031 334 aa9.51□□□□□ -0.89
CCDC33-209ENST00000560565 USP2O75604 605 aaPredicted RBP9.51□□□□□ -0.89
CCDC33-209ENST00000560565 FGFR1OPO95684 399 aaKnown RBP9.51□□□□□ -0.89
CCDC33-209ENST00000560565 TCP1P17987 556 aaKnown RBP9.51□□□□□ -0.89
CCDC33-209ENST00000560565 TNFRSF8P28908 595 aa9.51□□□□□ -0.89
CCDC33-209ENST00000560565 RDXP35241 583 aaKnown RBP9.51□□□□□ -0.89
CCDC33-209ENST00000560565 CDK17Q00537 523 aa9.51□□□□□ -0.89
CCDC33-209ENST00000560565 RBL2Q08999 1139 aa9.51□□□□□ -0.89
CCDC33-209ENST00000560565 PAK1Q13153 545 aa9.51□□□□□ -0.89
CCDC33-209ENST00000560565 RTN1Q16799 776 aa9.51□□□□□ -0.89
CCDC33-209ENST00000560565 C12orf60Q5U649 245 aa9.51□□□□□ -0.89
CCDC33-209ENST00000560565 TRAPPC11Q7Z392 1133 aa9.51□□□□□ -0.89
CCDC33-209ENST00000560565 DIS3L2Q8IYB7 885 aaKnown RBP9.51□□□□□ -0.89
CCDC33-209ENST00000560565 SLC35F6Q8N357 371 aa9.51□□□□□ -0.89
CCDC33-209ENST00000560565 TRIM58Q8NG06 486 aa9.51□□□□□ -0.89
CCDC33-209ENST00000560565 SH3RF3Q8TEJ3 882 aaPredicted RBP9.51□□□□□ -0.89
CCDC33-209ENST00000560565 HOOK2Q96ED9 719 aa9.51□□□□□ -0.89
CCDC33-209ENST00000560565 CUEDC2Q9H467 287 aa9.51□□□□□ -0.89
CCDC33-209ENST00000560565 PRDM6Q9NQX0 595 aa9.51□□□□□ -0.89
CCDC33-209ENST00000560565 INTS13Q9NVM9 706 aa9.51□□□□□ -0.89
CCDC33-209ENST00000560565 MCM9Q9NXL9 1143 aa9.51□□□□□ -0.89
CCDC33-209ENST00000560565 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.51□□□□□ -0.89
CCDC33-209ENST00000560565 LUC7L2Q9Y383 392 aaKnown RBP9.51□□□□□ -0.89
CCDC33-209ENST00000560565 SSC5DA1L4H1 1573 aa9.5□□□□□ -0.89
CCDC33-209ENST00000560565 ATAD5Q96QE3 1844 aa9.5□□□□□ -0.89
CCDC33-209ENST00000560565 GOLGA6L7A0A1B0GV03 622 aa9.5□□□□□ -0.89
CCDC33-209ENST00000560565 SOWAHDA6NJG2 315 aa9.5□□□□□ -0.89
CCDC33-209ENST00000560565 VGLL3A8MV65 326 aa9.5□□□□□ -0.89
CCDC33-209ENST00000560565 B4E1Z4 1266 aa9.5□□□□□ -0.89
CCDC33-209ENST00000560565 ACTN4O43707 911 aaKnown RBP9.5□□□□□ -0.89
CCDC33-209ENST00000560565 GTPBP6O43824 516 aaPredicted RBP9.5□□□□□ -0.89
CCDC33-209ENST00000560565 TACC1O75410 805 aa9.5□□□□□ -0.89
CCDC33-209ENST00000560565 COL9A1P20849 921 aa9.5□□□□□ -0.89
CCDC33-209ENST00000560565 HOXD11P31277 338 aaPredicted RBP9.5□□□□□ -0.89
CCDC33-209ENST00000560565 INPP5BP32019 993 aa9.5□□□□□ -0.89
CCDC33-209ENST00000560565 PAFAH1B1P43034 410 aa9.5□□□□□ -0.89
CCDC33-209ENST00000560565 DNM2P50570 870 aa9.5□□□□□ -0.89
CCDC33-209ENST00000560565 EPHB4P54760 987 aa9.5□□□□□ -0.89
CCDC33-209ENST00000560565 ANTXR2P58335 489 aa9.5□□□□□ -0.89
CCDC33-209ENST00000560565 VSNL1P62760 191 aa9.5□□□□□ -0.89
CCDC33-209ENST00000560565 CTDSPL2Q05D32 466 aa9.5□□□□□ -0.89
CCDC33-209ENST00000560565 TCP10Q12799 353 aa9.5□□□□□ -0.89
CCDC33-209ENST00000560565 SPA17Q15506 151 aa9.5□□□□□ -0.89
CCDC33-209ENST00000560565 FIGNQ5HY92 759 aa9.5□□□□□ -0.89
CCDC33-209ENST00000560565 KIAA1328Q86T90 577 aa9.5□□□□□ -0.89
CCDC33-209ENST00000560565 IQCA1Q86XH1 822 aa9.5□□□□□ -0.89
CCDC33-209ENST00000560565 CDAN1Q8IWY9 1227 aa9.5□□□□□ -0.89
CCDC33-209ENST00000560565 MICALL1Q8N3F8 863 aa9.5□□□□□ -0.89
CCDC33-209ENST00000560565 EIF1ADQ8N9N8 165 aaKnown RBP9.5□□□□□ -0.89
CCDC33-209ENST00000560565 TGFBRAP1Q8WUH2 860 aa9.5□□□□□ -0.89
CCDC33-209ENST00000560565 FAM151AQ8WW52 585 aa9.5□□□□□ -0.89
CCDC33-209ENST00000560565 CSRNP1Q96S65 589 aa9.5□□□□□ -0.89
CCDC33-209ENST00000560565 SLC26A6Q9BXS9 759 aa9.5□□□□□ -0.89
CCDC33-209ENST00000560565 CAPS2Q9BXY5 557 aa9.5□□□□□ -0.89
CCDC33-209ENST00000560565 THAP9Q9H5L6 903 aa9.5□□□□□ -0.89
CCDC33-209ENST00000560565 MRPL44Q9H9J2 332 aaKnown RBP9.5□□□□□ -0.89
CCDC33-209ENST00000560565 ZCCHC17Q9NP64 241 aaKnown RBP9.5□□□□□ -0.89
CCDC33-209ENST00000560565 ZSWIM5Q9P217 1185 aa9.5□□□□□ -0.89
CCDC33-209ENST00000560565 SERTAD1Q9UHV2 236 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms