RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 ETNPPLQ8TBG4 499 aa12.22□□□□□ -0.45
SNRPA1-211ENST00000560433 EEF2KMTQ96G04 330 aa12.22□□□□□ -0.45
SNRPA1-211ENST00000560433 OTUD5Q96G74 571 aa12.22□□□□□ -0.45
SNRPA1-211ENST00000560433 GSDMAQ96QA5 445 aa12.22□□□□□ -0.45
SNRPA1-211ENST00000560433 XPO4Q9C0E2 1151 aaKnown RBP12.22□□□□□ -0.45
SNRPA1-211ENST00000560433 KBTBD4Q9NVX7 518 aa12.22□□□□□ -0.45
SNRPA1-211ENST00000560433 NFE2L3Q9Y4A8 694 aa12.22□□□□□ -0.45
SNRPA1-211ENST00000560433 PPP2R3BQ9Y5P8 575 aa12.22□□□□□ -0.45
SNRPA1-211ENST00000560433 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.22□□□□□ -0.45
SNRPA1-211ENST00000560433 PTGS1P23219 599 aa12.22□□□□□ -0.45
SNRPA1-211ENST00000560433 CCT6AP40227 531 aaKnown RBP12.22□□□□□ -0.45
SNRPA1-211ENST00000560433 MAP3K9P80192 1104 aa12.22□□□□□ -0.45
SNRPA1-211ENST00000560433 CACNB1Q02641 598 aaPredicted RBP12.22□□□□□ -0.45
SNRPA1-211ENST00000560433 CYP4A11Q02928 519 aa12.22□□□□□ -0.45
SNRPA1-211ENST00000560433 ARID5BQ14865 1188 aa12.22□□□□□ -0.45
SNRPA1-211ENST00000560433 CREBRFQ8IUR6 639 aa12.22□□□□□ -0.45
SNRPA1-211ENST00000560433 CDCA5Q96FF9 252 aa12.22□□□□□ -0.45
SNRPA1-211ENST00000560433 TRERF1Q96PN7 1200 aa12.22□□□□□ -0.45
SNRPA1-211ENST00000560433 POLD4Q9HCU8 107 aa12.22□□□□□ -0.45
SNRPA1-211ENST00000560433 KIAA1024Q9UPX6 916 aa12.22□□□□□ -0.45
SNRPA1-211ENST00000560433 CTNND2Q9UQB3 1225 aa12.22□□□□□ -0.45
SNRPA1-211ENST00000560433 CLEC11AQ9Y240 323 aa12.22□□□□□ -0.45
SNRPA1-211ENST00000560433 PHIPQ8WWQ0 1821 aa12.22□□□□□ -0.45
SNRPA1-211ENST00000560433 CYP3A7-CYP3A51PA0A087WV96 503 aa12.21□□□□□ -0.45
SNRPA1-211ENST00000560433 GLTPD2A6NH11 291 aa12.21□□□□□ -0.45
SNRPA1-211ENST00000560433 SMTNL1A8MU46 457 aa12.21□□□□□ -0.45
SNRPA1-211ENST00000560433 PPP1R3GB7ZBB8 358 aa12.21□□□□□ -0.45
SNRPA1-211ENST00000560433 IRF6O14896 467 aa12.21□□□□□ -0.45
SNRPA1-211ENST00000560433 PPP1R12BO60237 982 aaPredicted RBP12.21□□□□□ -0.45
SNRPA1-211ENST00000560433 MED24O75448 989 aa12.21□□□□□ -0.45
SNRPA1-211ENST00000560433 ARP10275 920 aa12.21□□□□□ -0.45
SNRPA1-211ENST00000560433 FCER1AP12319 257 aa12.21□□□□□ -0.45
SNRPA1-211ENST00000560433 CYP3A7P24462 503 aa12.21□□□□□ -0.45
SNRPA1-211ENST00000560433 ORC2Q13416 577 aaPredicted RBP12.21□□□□□ -0.45
SNRPA1-211ENST00000560433 PDIA5Q14554 519 aa12.21□□□□□ -0.45
SNRPA1-211ENST00000560433 CCDC186Q7Z3E2 898 aa12.21□□□□□ -0.45
SNRPA1-211ENST00000560433 FILIP1Q7Z7B0 1213 aa12.21□□□□□ -0.45
SNRPA1-211ENST00000560433 C17orf53Q8N3J3 647 aaPredicted RBP12.21□□□□□ -0.45
SNRPA1-211ENST00000560433 MLKLQ8NB16 471 aa12.21□□□□□ -0.45
SNRPA1-211ENST00000560433 RAB34Q9BZG1 259 aa12.21□□□□□ -0.45
SNRPA1-211ENST00000560433 PITPNM2Q9BZ72 1349 aa12.21□□□□□ -0.45
SNRPA1-211ENST00000560433 COL11A1P12107 1806 aaPredicted RBP12.21□□□□□ -0.45
SNRPA1-211ENST00000560433 IGLV3-22A0A075B6J6 115 aa12.21□□□□□ -0.46
SNRPA1-211ENST00000560433 POTEFA5A3E0 1075 aa12.21□□□□□ -0.46
SNRPA1-211ENST00000560433 DDX39AO00148 427 aaKnown RBP12.21□□□□□ -0.46
SNRPA1-211ENST00000560433 KLRC4O43908 158 aa12.21□□□□□ -0.46
SNRPA1-211ENST00000560433 ZBED4O75132 1171 aa12.21□□□□□ -0.46
SNRPA1-211ENST00000560433 EIF2AK2P19525 551 aaKnown RBP12.21□□□□□ -0.46
SNRPA1-211ENST00000560433 PSMC6P62333 389 aa12.21□□□□□ -0.46
SNRPA1-211ENST00000560433 RPS6P62753 249 aaKnown RBP12.21□□□□□ -0.46
SNRPA1-211ENST00000560433 ASIC1P78348 528 aa12.21□□□□□ -0.46
SNRPA1-211ENST00000560433 SNRNP48Q6IEG0 339 aaKnown RBP12.21□□□□□ -0.46
SNRPA1-211ENST00000560433 POTEGQ6S5H5 508 aa12.21□□□□□ -0.46
SNRPA1-211ENST00000560433 POTEEQ6S8J3 1075 aa12.21□□□□□ -0.46
SNRPA1-211ENST00000560433 LARP4BQ92615 738 aaKnown RBP12.21□□□□□ -0.46
SNRPA1-211ENST00000560433 TAAR1Q96RJ0 339 aa12.21□□□□□ -0.46
SNRPA1-211ENST00000560433 PYM1Q9BRP8 204 aaKnown RBP12.21□□□□□ -0.46
SNRPA1-211ENST00000560433 TRIM9Q9C026 710 aa12.21□□□□□ -0.46
SNRPA1-211ENST00000560433 TMOD4Q9NZQ9 345 aa12.21□□□□□ -0.46
SNRPA1-211ENST00000560433 CSADQ9Y600 493 aa12.21□□□□□ -0.46
SNRPA1-211ENST00000560433 TRIM49BA6NDI0 452 aa12.2□□□□□ -0.46
SNRPA1-211ENST00000560433 MYMKA6NI61 221 aa12.2□□□□□ -0.46
SNRPA1-211ENST00000560433 EML1O00423 815 aa12.2□□□□□ -0.46
SNRPA1-211ENST00000560433 TRAF5O00463 557 aa12.2□□□□□ -0.46
SNRPA1-211ENST00000560433 IKBKBO14920 756 aa12.2□□□□□ -0.46
SNRPA1-211ENST00000560433 SERPINC1P01008 464 aa12.2□□□□□ -0.46
SNRPA1-211ENST00000560433 PRCPP42785 496 aa12.2□□□□□ -0.46
SNRPA1-211ENST00000560433 FANCCQ00597 558 aa12.2□□□□□ -0.46
SNRPA1-211ENST00000560433 SPIRE1Q08AE8 756 aa12.2□□□□□ -0.46
SNRPA1-211ENST00000560433 TMEM132BQ14DG7 1078 aa12.2□□□□□ -0.46
SNRPA1-211ENST00000560433 Q4G0T1 1027 aa12.2□□□□□ -0.46
SNRPA1-211ENST00000560433 MAP1SQ66K74 1059 aaPredicted RBP12.2□□□□□ -0.46
SNRPA1-211ENST00000560433 TRIML1Q8N9V2 468 aa12.2□□□□□ -0.46
SNRPA1-211ENST00000560433 MBOAT7Q96N66 472 aa12.2□□□□□ -0.46
SNRPA1-211ENST00000560433 NAP1L5Q96NT1 182 aaPredicted RBP12.2□□□□□ -0.46
SNRPA1-211ENST00000560433 GINM1Q9NU53 330 aa12.2□□□□□ -0.46
SNRPA1-211ENST00000560433 NPHP3-ACAD11A0A0J9YXS1 232 aa12.2□□□□□ -0.46
SNRPA1-211ENST00000560433 LRMPQ12912 555 aa12.2□□□□□ -0.46
SNRPA1-211ENST00000560433 SARM1Q6SZW1 724 aa12.2□□□□□ -0.46
SNRPA1-211ENST00000560433 GADL1Q6ZQY3 521 aa12.2□□□□□ -0.46
SNRPA1-211ENST00000560433 TRMT1LQ7Z2T5 733 aaKnown RBP12.2□□□□□ -0.46
SNRPA1-211ENST00000560433 WDR11Q9BZH6 1224 aa12.2□□□□□ -0.46
SNRPA1-211ENST00000560433 KCNF1Q9H3M0 494 aa12.2□□□□□ -0.46
SNRPA1-211ENST00000560433 TAF1DQ9H5J8 278 aaPredicted RBP12.2□□□□□ -0.46
SNRPA1-211ENST00000560433 RGL1Q9NZL6 768 aa12.2□□□□□ -0.46
SNRPA1-211ENST00000560433 C19orf81C9J6K1 198 aa12.19□□□□□ -0.46
SNRPA1-211ENST00000560433 MYCLP12524 364 aaPredicted RBP12.19□□□□□ -0.46
SNRPA1-211ENST00000560433 IDEP14735 1019 aa12.19□□□□□ -0.46
SNRPA1-211ENST00000560433 CDK11BP21127 795 aaKnown RBP12.19□□□□□ -0.46
SNRPA1-211ENST00000560433 DSG3P32926 999 aa12.19□□□□□ -0.46
SNRPA1-211ENST00000560433 CIITAP33076 1130 aa12.19□□□□□ -0.46
SNRPA1-211ENST00000560433 PMS1P54277 932 aaKnown RBP12.19□□□□□ -0.46
SNRPA1-211ENST00000560433 PDE4DQ08499 809 aa12.19□□□□□ -0.46
SNRPA1-211ENST00000560433 STK4Q13043 487 aa12.19□□□□□ -0.46
SNRPA1-211ENST00000560433 COG2Q14746 738 aa12.19□□□□□ -0.46
SNRPA1-211ENST00000560433 CATSPERGQ6ZRH7 1159 aa12.19□□□□□ -0.46
SNRPA1-211ENST00000560433 SV2BQ7L1I2 683 aa12.19□□□□□ -0.46
SNRPA1-211ENST00000560433 ZSCAN30Q86W11 494 aa12.19□□□□□ -0.46
SNRPA1-211ENST00000560433 CATSPER3Q86XQ3 398 aa12.19□□□□□ -0.46
SNRPA1-211ENST00000560433 L3MBTL3Q96JM7 780 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms