RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 GTF2IRD1Q9UHL9 959 aa19.55■□□□□ 0.72
HERC1-207ENST00000560316 B4DLN1 442 aa19.54■□□□□ 0.72
HERC1-207ENST00000560316 H3BQ06 376 aaPredicted RBP19.54■□□□□ 0.72
HERC1-207ENST00000560316 GH1P01241 217 aa19.54■□□□□ 0.72
HERC1-207ENST00000560316 TOP1P11387 765 aaKnown RBP19.54■□□□□ 0.72
HERC1-207ENST00000560316 MRPL12P52815 198 aaKnown RBP19.54■□□□□ 0.72
HERC1-207ENST00000560316 NHLH1Q02575 133 aa19.54■□□□□ 0.72
HERC1-207ENST00000560316 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.54■□□□□ 0.72
HERC1-207ENST00000560316 WNT8BQ93098 351 aa19.54■□□□□ 0.72
HERC1-207ENST00000560316 ALG1Q9BT22 464 aa19.54■□□□□ 0.72
HERC1-207ENST00000560316 TOMM22Q9NS69 142 aa19.54■□□□□ 0.72
HERC1-207ENST00000560316 ORC4O43929 436 aa19.53■□□□□ 0.72
HERC1-207ENST00000560316 PDHBP11177 359 aa19.53■□□□□ 0.72
HERC1-207ENST00000560316 MBTPS1Q14703 1052 aa19.53■□□□□ 0.72
HERC1-207ENST00000560316 USH1GQ495M9 461 aa19.53■□□□□ 0.72
HERC1-207ENST00000560316 RRP12Q5JTH9 1297 aaKnown RBP19.53■□□□□ 0.72
HERC1-207ENST00000560316 ZNF618Q5T7W0 954 aa19.53■□□□□ 0.72
HERC1-207ENST00000560316 VPS53Q5VIR6 699 aa19.53■□□□□ 0.72
HERC1-207ENST00000560316 TRAF7Q6Q0C0 670 aa19.53■□□□□ 0.72
HERC1-207ENST00000560316 C7orf31Q8N865 590 aa19.53■□□□□ 0.72
HERC1-207ENST00000560316 NEK9Q8TD19 979 aa19.53■□□□□ 0.72
HERC1-207ENST00000560316 FBXL18Q96ME1 805 aa19.53■□□□□ 0.72
HERC1-207ENST00000560316 DCTPP1Q9H773 170 aa19.53■□□□□ 0.72
HERC1-207ENST00000560316 ANAPC4Q9UJX5 808 aa19.53■□□□□ 0.72
HERC1-207ENST00000560316 DCXO43602 365 aa19.52■□□□□ 0.72
HERC1-207ENST00000560316 EFCAB14O75071 495 aa19.52■□□□□ 0.72
HERC1-207ENST00000560316 CASTP20810 708 aaKnown RBP19.52■□□□□ 0.72
HERC1-207ENST00000560316 PSEN2P49810 448 aa19.52■□□□□ 0.72
HERC1-207ENST00000560316 ZNF200P98182 395 aaPredicted RBP19.52■□□□□ 0.72
HERC1-207ENST00000560316 TRIM71Q2Q1W2 868 aaKnown RBP19.52■□□□□ 0.72
HERC1-207ENST00000560316 C20orf194Q5TEA3 1177 aa19.52■□□□□ 0.72
HERC1-207ENST00000560316 PI4K2BQ8TCG2 481 aa19.52■□□□□ 0.72
HERC1-207ENST00000560316 TBC1D5Q92609 795 aa19.52■□□□□ 0.72
HERC1-207ENST00000560316 MRPL38Q96DV4 380 aaKnown RBP19.52■□□□□ 0.72
HERC1-207ENST00000560316 PNMA2Q9UL42 364 aa19.52■□□□□ 0.72
HERC1-207ENST00000560316 INSL6Q9Y581 213 aa19.52■□□□□ 0.72
HERC1-207ENST00000560316 WDR19Q8NEZ3 1342 aa19.51■□□□□ 0.71
HERC1-207ENST00000560316 WDFY4Q6ZS81 3184 aa19.51■□□□□ 0.71
HERC1-207ENST00000560316 ZNF543Q08ER8 600 aa19.51■□□□□ 0.71
HERC1-207ENST00000560316 PTK7Q13308 1070 aa19.51■□□□□ 0.71
HERC1-207ENST00000560316 DGKDQ16760 1214 aa19.51■□□□□ 0.71
HERC1-207ENST00000560316 PUS10Q3MIT2 529 aaKnown RBP19.51■□□□□ 0.71
HERC1-207ENST00000560316 EP400NLQ6ZTU2 488 aa19.51■□□□□ 0.71
HERC1-207ENST00000560316 MYOCDQ8IZQ8 938 aa19.51■□□□□ 0.71
HERC1-207ENST00000560316 OTUD7AQ8TE49 926 aaPredicted RBP19.51■□□□□ 0.71
HERC1-207ENST00000560316 TAAR1Q96RJ0 339 aa19.51■□□□□ 0.71
HERC1-207ENST00000560316 TTC41PQ6P2S7 1318 aa19.51■□□□□ 0.71
HERC1-207ENST00000560316 POTEB3A0JP26 581 aa19.5■□□□□ 0.71
HERC1-207ENST00000560316 LGR5O75473 907 aa19.5■□□□□ 0.71
HERC1-207ENST00000560316 FGRP09769 529 aa19.5■□□□□ 0.71
HERC1-207ENST00000560316 ZNF286BP0CG31 522 aa19.5■□□□□ 0.71
HERC1-207ENST00000560316 MFSD10Q14728 455 aa19.5■□□□□ 0.71
HERC1-207ENST00000560316 EPC2Q52LR7 807 aa19.5■□□□□ 0.71
HERC1-207ENST00000560316 POTEBQ6S5H4 581 aa19.5■□□□□ 0.71
HERC1-207ENST00000560316 ANKS1AQ92625 1134 aa19.5■□□□□ 0.71
HERC1-207ENST00000560316 CPVLQ9H3G5 476 aa19.5■□□□□ 0.71
HERC1-207ENST00000560316 COL20A1Q9P218 1284 aa19.5■□□□□ 0.71
HERC1-207ENST00000560316 AMHP03971 560 aa19.49■□□□□ 0.71
HERC1-207ENST00000560316 HTRA4P83105 476 aaPredicted RBP19.49■□□□□ 0.71
HERC1-207ENST00000560316 PTPROQ16827 1216 aa19.49■□□□□ 0.71
HERC1-207ENST00000560316 KIAA0753Q2KHM9 967 aa19.49■□□□□ 0.71
HERC1-207ENST00000560316 TCEAL5Q5H9L2 206 aa19.49■□□□□ 0.71
HERC1-207ENST00000560316 BANK1Q8NDB2 785 aa19.49■□□□□ 0.71
HERC1-207ENST00000560316 RGS22Q8NE09 1264 aa19.49■□□□□ 0.71
HERC1-207ENST00000560316 DBF4BQ8NFT6 615 aa19.49■□□□□ 0.71
HERC1-207ENST00000560316 TCP11L1Q9NUJ3 509 aa19.49■□□□□ 0.71
HERC1-207ENST00000560316 CTNNA3Q9UI47 895 aa19.49■□□□□ 0.71
HERC1-207ENST00000560316 GOLGA8HP0CJ92 632 aa19.48■□□□□ 0.71
HERC1-207ENST00000560316 ZP2Q05996 745 aa19.48■□□□□ 0.71
HERC1-207ENST00000560316 MKRN4PQ13434 485 aaPredicted RBP19.48■□□□□ 0.71
HERC1-207ENST00000560316 HIC1Q14526 733 aa19.48■□□□□ 0.71
HERC1-207ENST00000560316 TIGD5Q53EQ6 642 aa19.48■□□□□ 0.71
HERC1-207ENST00000560316 SP7Q8TDD2 431 aaPredicted RBP19.48■□□□□ 0.71
HERC1-207ENST00000560316 SYTL5Q8TDW5 730 aaPredicted RBP19.48■□□□□ 0.71
HERC1-207ENST00000560316 NSUN6Q8TEA1 469 aaKnown RBP19.48■□□□□ 0.71
HERC1-207ENST00000560316 KATNAL1Q9BW62 490 aa19.48■□□□□ 0.71
HERC1-207ENST00000560316 UBA5Q9GZZ9 404 aa19.48■□□□□ 0.71
HERC1-207ENST00000560316 DDX41Q9UJV9 622 aaKnown RBP19.48■□□□□ 0.71
HERC1-207ENST00000560316 HAS3O00219 553 aa19.47■□□□□ 0.71
HERC1-207ENST00000560316 F2P00734 622 aa19.47■□□□□ 0.71
HERC1-207ENST00000560316 SNHG28P0DPA3 235 aa19.47■□□□□ 0.71
HERC1-207ENST00000560316 GPM6BQ13491 265 aa19.47■□□□□ 0.71
HERC1-207ENST00000560316 STXBP2Q15833 593 aa19.47■□□□□ 0.71
HERC1-207ENST00000560316 HFE2Q6ZVN8 426 aa19.47■□□□□ 0.71
HERC1-207ENST00000560316 PABPC5Q96DU9 382 aaKnown RBP19.47■□□□□ 0.71
HERC1-207ENST00000560316 MICAL3Q7RTP6 2002 aa19.46■□□□□ 0.71
HERC1-207ENST00000560316 H3BNC9 293 aa19.46■□□□□ 0.71
HERC1-207ENST00000560316 THPOP40225 353 aa19.46■□□□□ 0.71
HERC1-207ENST00000560316 ALX1Q15699 326 aa19.46■□□□□ 0.71
HERC1-207ENST00000560316 DHX37Q8IY37 1157 aaKnown RBP19.46■□□□□ 0.71
HERC1-207ENST00000560316 EMID1Q96A84 441 aaPredicted RBP19.46■□□□□ 0.71
HERC1-207ENST00000560316 RMDN3Q96TC7 470 aa19.46■□□□□ 0.71
HERC1-207ENST00000560316 KCNH6Q9H252 994 aa19.46■□□□□ 0.71
HERC1-207ENST00000560316 KIAA1217Q5T5P2 1943 aa19.45■□□□□ 0.7
HERC1-207ENST00000560316 C19orf67A6NJJ6 358 aa19.45■□□□□ 0.7
HERC1-207ENST00000560316 RSPH10B2B2RC85 870 aa19.45■□□□□ 0.7
HERC1-207ENST00000560316 SORBS3O60504 671 aa19.45■□□□□ 0.7
HERC1-207ENST00000560316 FGAP02671 866 aa19.45■□□□□ 0.7
HERC1-207ENST00000560316 RSPH10BP0C881 870 aa19.45■□□□□ 0.7
HERC1-207ENST00000560316 EIF2AK2P19525 551 aaKnown RBP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms