RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 CASP7P55210 303 aa5.79□□□□□ -1.48
LRRC28-218ENST00000560236 FAM124AQ86V42 546 aa5.79□□□□□ -1.48
LRRC28-218ENST00000560236 ZC3H18Q86VM9 953 aaKnown RBP5.79□□□□□ -1.48
LRRC28-218ENST00000560236 TEX2Q8IWB9 1127 aa5.79□□□□□ -1.48
LRRC28-218ENST00000560236 FAM26EQ8N5C1 309 aa5.79□□□□□ -1.48
LRRC28-218ENST00000560236 TTLL6Q8N841 843 aa5.79□□□□□ -1.48
LRRC28-218ENST00000560236 BVESQ8NE79 360 aa5.79□□□□□ -1.48
LRRC28-218ENST00000560236 SHDQ96IW2 340 aa5.79□□□□□ -1.48
LRRC28-218ENST00000560236 APBA2Q99767 749 aa5.79□□□□□ -1.48
LRRC28-218ENST00000560236 C22orf46C9J442 243 aa5.78□□□□□ -1.48
LRRC28-218ENST00000560236 NOP56O00567 594 aaKnown RBP5.78□□□□□ -1.48
LRRC28-218ENST00000560236 RECKO95980 971 aa5.78□□□□□ -1.48
LRRC28-218ENST00000560236 THBDP07204 575 aa5.78□□□□□ -1.48
LRRC28-218ENST00000560236 NAT2P11245 290 aa5.78□□□□□ -1.48
LRRC28-218ENST00000560236 NASPP49321 788 aaPredicted RBP5.78□□□□□ -1.48
LRRC28-218ENST00000560236 TBC1D10BQ4KMP7 808 aaPredicted RBP5.78□□□□□ -1.48
LRRC28-218ENST00000560236 FAM26FQ5R3K3 315 aa5.78□□□□□ -1.48
LRRC28-218ENST00000560236 CPZQ66K79 652 aa5.78□□□□□ -1.48
LRRC28-218ENST00000560236 BORAQ6PGQ7 559 aa5.78□□□□□ -1.48
LRRC28-218ENST00000560236 METTL16Q86W50 562 aaKnown RBP5.78□□□□□ -1.48
LRRC28-218ENST00000560236 MIB1Q86YT6 1006 aa5.78□□□□□ -1.48
LRRC28-218ENST00000560236 LGI4Q8N135 537 aa5.78□□□□□ -1.48
LRRC28-218ENST00000560236 SEC14L1Q92503 715 aa5.78□□□□□ -1.48
LRRC28-218ENST00000560236 PPP1R14AQ96A00 147 aa5.78□□□□□ -1.48
LRRC28-218ENST00000560236 C8orf49Q96NF6 230 aa5.78□□□□□ -1.48
LRRC28-218ENST00000560236 SAMD11Q96NU1 681 aa5.78□□□□□ -1.48
LRRC28-218ENST00000560236 MROH6A6NGR9 719 aa5.77□□□□□ -1.49
LRRC28-218ENST00000560236 TNFRSF1AP19438 455 aa5.77□□□□□ -1.49
LRRC28-218ENST00000560236 INF2Q27J81 1249 aa5.77□□□□□ -1.49
LRRC28-218ENST00000560236 MCTP2Q6DN12 878 aa5.77□□□□□ -1.49
LRRC28-218ENST00000560236 STK32CQ86UX6 486 aa5.77□□□□□ -1.49
LRRC28-218ENST00000560236 TTC9BQ8N6N2 239 aa5.77□□□□□ -1.49
LRRC28-218ENST00000560236 INVSQ9Y283 1065 aa5.77□□□□□ -1.49
LRRC28-218ENST00000560236 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.77□□□□□ -1.49
LRRC28-218ENST00000560236 ZNF536O15090 1300 aa5.76□□□□□ -1.49
LRRC28-218ENST00000560236 VAMP1P23763 118 aa5.76□□□□□ -1.49
LRRC28-218ENST00000560236 SLC6A11P48066 632 aa5.76□□□□□ -1.49
LRRC28-218ENST00000560236 GJA8P48165 433 aa5.76□□□□□ -1.49
LRRC28-218ENST00000560236 ZNF143P52747 638 aaPredicted RBP5.76□□□□□ -1.49
LRRC28-218ENST00000560236 ITGA1P56199 1179 aa5.76□□□□□ -1.49
LRRC28-218ENST00000560236 ZXDAP98168 799 aa5.76□□□□□ -1.49
LRRC28-218ENST00000560236 C9orf131Q5VYM1 1079 aa5.76□□□□□ -1.49
LRRC28-218ENST00000560236 GTF2IRD2BQ6EKJ0 949 aa5.76□□□□□ -1.49
LRRC28-218ENST00000560236 MILR1Q7Z6M3 343 aa5.76□□□□□ -1.49
LRRC28-218ENST00000560236 GTF2IRD2Q86UP8 949 aa5.76□□□□□ -1.49
LRRC28-218ENST00000560236 CYP26B1Q9NR63 512 aa5.76□□□□□ -1.49
LRRC28-218ENST00000560236 SMARCA4P51532 1647 aa5.76□□□□□ -1.49
LRRC28-218ENST00000560236 BAZ1BQ9UIG0 1483 aaKnown RBP5.76□□□□□ -1.49
LRRC28-218ENST00000560236 DDX3XO00571 662 aaKnown RBP eCLIP5.75□□□□□ -1.49
LRRC28-218ENST00000560236 MATN3O15232 486 aa5.75□□□□□ -1.49
LRRC28-218ENST00000560236 ZNF20P17024 532 aa5.75□□□□□ -1.49
LRRC28-218ENST00000560236 FPR2P25090 351 aa5.75□□□□□ -1.49
LRRC28-218ENST00000560236 STAT5AP42229 794 aa5.75□□□□□ -1.49
LRRC28-218ENST00000560236 RPL11P62913 178 aaKnown RBP5.75□□□□□ -1.49
LRRC28-218ENST00000560236 MROH9Q5TGP6 573 aa5.75□□□□□ -1.49
LRRC28-218ENST00000560236 IQCEQ6IPM2 695 aa5.75□□□□□ -1.49
LRRC28-218ENST00000560236 CYB5RLQ6IPT4 315 aa5.75□□□□□ -1.49
LRRC28-218ENST00000560236 NT5DC4Q86YG4 428 aa5.75□□□□□ -1.49
LRRC28-218ENST00000560236 TRIM59Q8IWR1 403 aa5.75□□□□□ -1.49
LRRC28-218ENST00000560236 FAM126BQ8IXS8 530 aa5.75□□□□□ -1.49
LRRC28-218ENST00000560236 FAM169BQ8N8A8 192 aa5.75□□□□□ -1.49
LRRC28-218ENST00000560236 TXNDC5Q8NBS9 432 aaKnown RBP5.75□□□□□ -1.49
LRRC28-218ENST00000560236 CHST13Q8NET6 341 aa5.75□□□□□ -1.49
LRRC28-218ENST00000560236 FRS2Q8WU20 508 aa5.75□□□□□ -1.49
LRRC28-218ENST00000560236 YIPF4Q9BSR8 244 aa5.75□□□□□ -1.49
LRRC28-218ENST00000560236 C1QTNF3Q9BXJ4 246 aa5.75□□□□□ -1.49
LRRC28-218ENST00000560236 KRTAP3-1Q9BYR8 98 aa5.75□□□□□ -1.49
LRRC28-218ENST00000560236 NKX2-4Q9H2Z4 354 aa5.75□□□□□ -1.49
LRRC28-218ENST00000560236 NGRNQ9NPE2 291 aaKnown RBP5.75□□□□□ -1.49
LRRC28-218ENST00000560236 TIMM13Q9Y5L4 95 aaPredicted RBP5.75□□□□□ -1.49
LRRC28-218ENST00000560236 C1QTNF3-AMACRE9PGA6 284 aa5.74□□□□□ -1.49
LRRC28-218ENST00000560236 NCAPHQ15003 741 aa5.74□□□□□ -1.49
LRRC28-218ENST00000560236 PRR31Q5SQ13 230 aa5.74□□□□□ -1.49
LRRC28-218ENST00000560236 GLB1LQ6UWU2 654 aa5.74□□□□□ -1.49
LRRC28-218ENST00000560236 CEP68Q76N32 757 aa5.74□□□□□ -1.49
LRRC28-218ENST00000560236 RIOX2Q8IUF8 465 aa5.74□□□□□ -1.49
LRRC28-218ENST00000560236 NPLOC4Q8TAT6 608 aa5.74□□□□□ -1.49
LRRC28-218ENST00000560236 TRMT2BQ96GJ1 504 aaKnown RBP5.74□□□□□ -1.49
LRRC28-218ENST00000560236 SEC16BQ96JE7 1060 aa5.74□□□□□ -1.49
LRRC28-218ENST00000560236 LCORQ96JN0 433 aaPredicted RBP5.74□□□□□ -1.49
LRRC28-218ENST00000560236 PEG3Q9GZU2 1588 aa5.74□□□□□ -1.49
LRRC28-218ENST00000560236 MYO1BO43795 1136 aa5.73□□□□□ -1.49
LRRC28-218ENST00000560236 AKAP8O43823 692 aaKnown RBP5.73□□□□□ -1.49
LRRC28-218ENST00000560236 NKX3-2P78367 333 aa5.73□□□□□ -1.49
LRRC28-218ENST00000560236 PRAMEF18Q5VWM3 479 aa5.73□□□□□ -1.49
LRRC28-218ENST00000560236 ANAPC16Q96DE5 110 aa5.73□□□□□ -1.49
LRRC28-218ENST00000560236 MRGPRX3Q96LB0 322 aa5.73□□□□□ -1.49
LRRC28-218ENST00000560236 LGR4Q9BXB1 951 aa5.73□□□□□ -1.49
LRRC28-218ENST00000560236 STRIP2Q9ULQ0 834 aa5.73□□□□□ -1.49
LRRC28-218ENST00000560236 BCL6P41182 706 aa5.72□□□□□ -1.49
LRRC28-218ENST00000560236 GTF2A2P52657 109 aa5.72□□□□□ -1.49
LRRC28-218ENST00000560236 MFAP1P55081 439 aaKnown RBP5.72□□□□□ -1.49
LRRC28-218ENST00000560236 HDLBPQ00341 1268 aaKnown RBP5.72□□□□□ -1.49
LRRC28-218ENST00000560236 CYP4F3Q08477 520 aa5.72□□□□□ -1.49
LRRC28-218ENST00000560236 CR1LQ2VPA4 569 aa5.72□□□□□ -1.49
LRRC28-218ENST00000560236 E4F1Q66K89 784 aaPredicted RBP5.72□□□□□ -1.49
LRRC28-218ENST00000560236 LIMS2Q7Z4I7 341 aa5.72□□□□□ -1.49
LRRC28-218ENST00000560236 Q8N1Y9 231 aa5.72□□□□□ -1.49
LRRC28-218ENST00000560236 DIO2Q92813 273 aa5.72□□□□□ -1.49
LRRC28-218ENST00000560236 DVL3Q92997 716 aaPredicted RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms