RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 CLTBP09497 229 aa15.24■□□□□ 0.03
SMAD3-213ENST00000560175 CPT1AP50416 773 aa15.24■□□□□ 0.03
SMAD3-213ENST00000560175 FXR1P51114 621 aaKnown RBP eCLIP15.24■□□□□ 0.03
SMAD3-213ENST00000560175 MRPS9P82933 396 aaKnown RBP15.24■□□□□ 0.03
SMAD3-213ENST00000560175 PURAQ00577 322 aaKnown RBP15.24■□□□□ 0.03
SMAD3-213ENST00000560175 ARHGAP1Q07960 439 aa15.24■□□□□ 0.03
SMAD3-213ENST00000560175 KCNV1Q6PIU1 500 aa15.24■□□□□ 0.03
SMAD3-213ENST00000560175 FAM126BQ8IXS8 530 aa15.24■□□□□ 0.03
SMAD3-213ENST00000560175 IL31RAQ8NI17 732 aa15.24■□□□□ 0.03
SMAD3-213ENST00000560175 PIBF1Q8WXW3 757 aa15.24■□□□□ 0.03
SMAD3-213ENST00000560175 COPS5Q92905 334 aa15.24■□□□□ 0.03
SMAD3-213ENST00000560175 POLR3EQ9NVU0 708 aa15.24■□□□□ 0.03
SMAD3-213ENST00000560175 CCDC196A0A1B0GTZ2 297 aa15.23■□□□□ 0.03
SMAD3-213ENST00000560175 DCDC2CA8MYV0 355 aa15.23■□□□□ 0.03
SMAD3-213ENST00000560175 HOXD8P13378 290 aaPredicted RBP15.23■□□□□ 0.03
SMAD3-213ENST00000560175 CASTP20810 708 aaKnown RBP15.23■□□□□ 0.03
SMAD3-213ENST00000560175 ITGB8P26012 769 aa15.23■□□□□ 0.03
SMAD3-213ENST00000560175 ICAM3P32942 547 aa15.23■□□□□ 0.03
SMAD3-213ENST00000560175 ADD1P35611 737 aaKnown RBP15.23■□□□□ 0.03
SMAD3-213ENST00000560175 APOBRQ0VD83 1088 aa15.23■□□□□ 0.03
SMAD3-213ENST00000560175 NTRK3Q16288 839 aa15.23■□□□□ 0.03
SMAD3-213ENST00000560175 LY6KQ17RY6 165 aa15.23■□□□□ 0.03
SMAD3-213ENST00000560175 XRRA1Q6P2D8 792 aa15.23■□□□□ 0.03
SMAD3-213ENST00000560175 USP17L6PQ6QN14 398 aa15.23■□□□□ 0.03
SMAD3-213ENST00000560175 SEPT14Q6ZU15 432 aa15.23■□□□□ 0.03
SMAD3-213ENST00000560175 CCDC82Q8N4S0 544 aa15.23■□□□□ 0.03
SMAD3-213ENST00000560175 OR6J1Q8NGC5 347 aa15.23■□□□□ 0.03
SMAD3-213ENST00000560175 BRF1Q92994 677 aa15.23■□□□□ 0.03
SMAD3-213ENST00000560175 PSTPIP2Q9H939 334 aa15.23■□□□□ 0.03
SMAD3-213ENST00000560175 TBX21Q9UL17 535 aa15.23■□□□□ 0.03
SMAD3-213ENST00000560175 V9GY48 417 aaPredicted RBP15.23■□□□□ 0.03
SMAD3-213ENST00000560175 hCG_1642624A0A1W2PR95 340 aa15.22■□□□□ 0.03
SMAD3-213ENST00000560175 GOLGA8AA7E2F4 631 aa15.22■□□□□ 0.03
SMAD3-213ENST00000560175 GOLGA8BA8MQT2 603 aa15.22■□□□□ 0.03
SMAD3-213ENST00000560175 hCG_1984214I3L0E3 225 aa15.22■□□□□ 0.03
SMAD3-213ENST00000560175 GH1P01241 217 aa15.22■□□□□ 0.03
SMAD3-213ENST00000560175 CCND2P30279 289 aa15.22■□□□□ 0.03
SMAD3-213ENST00000560175 ANAPC15P60006 121 aa15.22■□□□□ 0.03
SMAD3-213ENST00000560175 ITGA7Q13683 1181 aa15.22■□□□□ 0.03
SMAD3-213ENST00000560175 TOB2Q14106 344 aaPredicted RBP15.22■□□□□ 0.03
SMAD3-213ENST00000560175 TYW1BQ6NUM6 668 aa15.22■□□□□ 0.03
SMAD3-213ENST00000560175 FCHSD1Q86WN1 690 aa15.22■□□□□ 0.03
SMAD3-213ENST00000560175 ZNF713Q8N859 430 aaPredicted RBP15.22■□□□□ 0.03
SMAD3-213ENST00000560175 INPP4AQ96PE3 977 aaPredicted RBP15.22■□□□□ 0.03
SMAD3-213ENST00000560175 ALDH8A1Q9H2A2 487 aaPredicted RBP15.22■□□□□ 0.03
SMAD3-213ENST00000560175 PRKAG2Q9UGJ0 569 aa15.22■□□□□ 0.03
SMAD3-213ENST00000560175 PQBP1O60828 265 aaKnown RBP15.21■□□□□ 0.03
SMAD3-213ENST00000560175 SLC34A2O95436 690 aa15.21■□□□□ 0.03
SMAD3-213ENST00000560175 MYCLP12524 364 aaPredicted RBP15.21■□□□□ 0.03
SMAD3-213ENST00000560175 PDIA3P30101 505 aaKnown RBP15.21■□□□□ 0.03
SMAD3-213ENST00000560175 METAP2P50579 478 aaKnown RBP eCLIP15.21■□□□□ 0.03
SMAD3-213ENST00000560175 MDM2Q00987 491 aaPredicted RBP15.21■□□□□ 0.03
SMAD3-213ENST00000560175 SP2Q02086 613 aa15.21■□□□□ 0.03
SMAD3-213ENST00000560175 BRDTQ58F21 947 aaPredicted RBP15.21■□□□□ 0.03
SMAD3-213ENST00000560175 MYSM1Q5VVJ2 828 aa15.21■□□□□ 0.03
SMAD3-213ENST00000560175 PCNX4Q63HM2 1172 aa15.21■□□□□ 0.03
SMAD3-213ENST00000560175 WWC2Q6AWC2 1192 aa15.21■□□□□ 0.03
SMAD3-213ENST00000560175 PPP1R18Q6NYC8 613 aa15.21■□□□□ 0.03
SMAD3-213ENST00000560175 CUL5Q93034 780 aa15.21■□□□□ 0.03
SMAD3-213ENST00000560175 ZNF274Q96GC6 653 aaPredicted RBP15.21■□□□□ 0.03
SMAD3-213ENST00000560175 MTG1Q9BT17 334 aaPredicted RBP15.21■□□□□ 0.03
SMAD3-213ENST00000560175 BARHL2Q9NY43 387 aa15.21■□□□□ 0.03
SMAD3-213ENST00000560175 CYP46A1Q9Y6A2 500 aa15.21■□□□□ 0.03
SMAD3-213ENST00000560175 SPATA31C2B4DYI2 1134 aa15.2■□□□□ 0.02
SMAD3-213ENST00000560175 PRPF3O43395 683 aaKnown RBP15.2■□□□□ 0.02
SMAD3-213ENST00000560175 TIMP1P01033 207 aa15.2■□□□□ 0.02
SMAD3-213ENST00000560175 FGD1P98174 961 aa15.2■□□□□ 0.02
SMAD3-213ENST00000560175 LAMC2Q13753 1193 aa15.2■□□□□ 0.02
SMAD3-213ENST00000560175 PKN1Q16512 942 aa15.2■□□□□ 0.02
SMAD3-213ENST00000560175 PFKFB3Q16875 520 aaPredicted RBP15.2■□□□□ 0.02
SMAD3-213ENST00000560175 LRIT3Q3SXY7 679 aa15.2■□□□□ 0.02
SMAD3-213ENST00000560175 TDHQ8IZJ6 230 aa15.2■□□□□ 0.02
SMAD3-213ENST00000560175 SMARCC2Q8TAQ2 1214 aa15.2■□□□□ 0.02
SMAD3-213ENST00000560175 AFG1LQ8WV93 481 aa15.2■□□□□ 0.02
SMAD3-213ENST00000560175 BADQ92934 168 aa15.2■□□□□ 0.02
SMAD3-213ENST00000560175 VTI1AQ96AJ9 217 aa15.2■□□□□ 0.02
SMAD3-213ENST00000560175 LBHD1Q9BQE6 289 aaPredicted RBP15.2■□□□□ 0.02
SMAD3-213ENST00000560175 UBE2OQ9C0C9 1292 aaKnown RBP15.2■□□□□ 0.02
SMAD3-213ENST00000560175 RIC8AQ9NPQ8 531 aa15.2■□□□□ 0.02
SMAD3-213ENST00000560175 TMEM39AQ9NV64 488 aa15.2■□□□□ 0.02
SMAD3-213ENST00000560175 PCDH10Q9P2E7 1040 aa15.2■□□□□ 0.02
SMAD3-213ENST00000560175 MRVI1Q9Y6F6 885 aa15.2■□□□□ 0.02
SMAD3-213ENST00000560175 STXBP3O00186 592 aa15.19■□□□□ 0.02
SMAD3-213ENST00000560175 EIF5BO60841 1220 aaKnown RBP15.19■□□□□ 0.02
SMAD3-213ENST00000560175 PPFIA4O75335 1185 aa15.19■□□□□ 0.02
SMAD3-213ENST00000560175 MMP3P08254 477 aa15.19■□□□□ 0.02
SMAD3-213ENST00000560175 IFNAR1P17181 557 aa15.19■□□□□ 0.02
SMAD3-213ENST00000560175 CLK2P49760 499 aaKnown RBP15.19■□□□□ 0.02
SMAD3-213ENST00000560175 PSMC6P62333 389 aa15.19■□□□□ 0.02
SMAD3-213ENST00000560175 PTPN11Q06124 597 aaPredicted RBP15.19■□□□□ 0.02
SMAD3-213ENST00000560175 SEMA3FQ13275 785 aa15.19■□□□□ 0.02
SMAD3-213ENST00000560175 CELF3Q5SZQ8 465 aaKnown RBP15.19■□□□□ 0.02
SMAD3-213ENST00000560175 NFRKBQ6P4R8 1299 aa15.19■□□□□ 0.02
SMAD3-213ENST00000560175 HEATR3Q7Z4Q2 680 aa15.19■□□□□ 0.02
SMAD3-213ENST00000560175 PPTC7Q8NI37 304 aa15.19■□□□□ 0.02
SMAD3-213ENST00000560175 KAT2BQ92831 832 aa15.19■□□□□ 0.02
SMAD3-213ENST00000560175 GPKOWQ92917 476 aaPredicted RBP eCLIP15.19■□□□□ 0.02
SMAD3-213ENST00000560175 SENP7Q9BQF6 1050 aa15.19■□□□□ 0.02
SMAD3-213ENST00000560175 LAMA2P24043 3122 aaKnown RBP15.19■□□□□ 0.02
SMAD3-213ENST00000560175 ESYT2A0FGR8 921 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms