RNA–Protein interactions for RNA: ENST00000560029.5

CRNDE-208, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 659 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-208ENST00000560029 ENDOUP21128 410 aaKnown RBP7.35□□□□□ -1.23
CRNDE-208ENST00000560029 CAP1Q01518 475 aa7.35□□□□□ -1.23
CRNDE-208ENST00000560029 PAQR3Q6TCH7 311 aa7.35□□□□□ -1.23
CRNDE-208ENST00000560029 TRIM59Q8IWR1 403 aa7.35□□□□□ -1.23
CRNDE-208ENST00000560029 LRRC47Q8N1G4 583 aaKnown RBP7.35□□□□□ -1.23
CRNDE-208ENST00000560029 ZNF669Q96BR6 464 aaPredicted RBP7.35□□□□□ -1.23
CRNDE-208ENST00000560029 MRGPRX3Q96LB0 322 aa7.35□□□□□ -1.23
CRNDE-208ENST00000560029 SLC12A9Q9BXP2 914 aa7.35□□□□□ -1.23
CRNDE-208ENST00000560029 FAN1Q9Y2M0 1017 aa7.35□□□□□ -1.23
CRNDE-208ENST00000560029 CYBBP04839 570 aa7.34□□□□□ -1.23
CRNDE-208ENST00000560029 CD3EP07766 207 aa7.34□□□□□ -1.23
CRNDE-208ENST00000560029 MAGEA10P43363 369 aaPredicted RBP7.34□□□□□ -1.23
CRNDE-208ENST00000560029 PPP2R2AP63151 447 aa7.34□□□□□ -1.23
CRNDE-208ENST00000560029 POMZP3Q6PJE2 187 aa7.34□□□□□ -1.23
CRNDE-208ENST00000560029 SAPCD2Q86UD0 394 aa7.34□□□□□ -1.23
CRNDE-208ENST00000560029 JAZF1Q86VZ6 243 aa7.34□□□□□ -1.23
CRNDE-208ENST00000560029 CRACR2BQ8N4Y2 399 aaPredicted RBP7.34□□□□□ -1.23
CRNDE-208ENST00000560029 BTN2A2Q8WVV5 523 aa7.34□□□□□ -1.23
CRNDE-208ENST00000560029 SGSM3Q96HU1 749 aa7.34□□□□□ -1.23
CRNDE-208ENST00000560029 MCMBPQ9BTE3 642 aa7.34□□□□□ -1.23
CRNDE-208ENST00000560029 STXBP3O00186 592 aa7.33□□□□□ -1.24
CRNDE-208ENST00000560029 GRIA2P42262 883 aa7.33□□□□□ -1.24
CRNDE-208ENST00000560029 HTRA3P83110 453 aa7.33□□□□□ -1.24
CRNDE-208ENST00000560029 ZXDAP98168 799 aa7.33□□□□□ -1.24
CRNDE-208ENST00000560029 AMPD2Q01433 879 aa7.33□□□□□ -1.24
CRNDE-208ENST00000560029 POU4F1Q01851 419 aa7.33□□□□□ -1.24
CRNDE-208ENST00000560029 DLX2Q07687 328 aaPredicted RBP7.33□□□□□ -1.24
CRNDE-208ENST00000560029 GRB10Q13322 594 aa7.33□□□□□ -1.24
CRNDE-208ENST00000560029 HLA-DQA1Q5Y7H0 255 aa7.33□□□□□ -1.24
CRNDE-208ENST00000560029 GTF2IRD2BQ6EKJ0 949 aa7.33□□□□□ -1.24
CRNDE-208ENST00000560029 GTF2IRD2Q86UP8 949 aa7.33□□□□□ -1.24
CRNDE-208ENST00000560029 KANSL2Q9H9L4 492 aa7.33□□□□□ -1.24
CRNDE-208ENST00000560029 ARHGEF4Q9NR80 690 aa7.33□□□□□ -1.24
CRNDE-208ENST00000560029 DBR1Q9UK59 544 aaKnown RBP7.33□□□□□ -1.24
CRNDE-208ENST00000560029 MRPL42Q9Y6G3 142 aaKnown RBP7.33□□□□□ -1.24
CRNDE-208ENST00000560029 ADCY3O60266 1144 aa7.32□□□□□ -1.24
CRNDE-208ENST00000560029 NOBOXO60393 691 aa7.32□□□□□ -1.24
CRNDE-208ENST00000560029 FAM153BP0C7A2 387 aa7.32□□□□□ -1.24
CRNDE-208ENST00000560029 IFNGR1P15260 489 aa7.32□□□□□ -1.24
CRNDE-208ENST00000560029 TNFRSF1AP19438 455 aa7.32□□□□□ -1.24
CRNDE-208ENST00000560029 HSP90AA2PQ14568 343 aaPredicted RBP7.32□□□□□ -1.24
CRNDE-208ENST00000560029 YOD1Q5VVQ6 348 aaPredicted RBP7.32□□□□□ -1.24
CRNDE-208ENST00000560029 SH3TC2Q8TF17 1288 aa7.32□□□□□ -1.24
CRNDE-208ENST00000560029 FCRL3Q96P31 734 aaPredicted RBP7.32□□□□□ -1.24
CRNDE-208ENST00000560029 PDLIM7Q9NR12 457 aa7.32□□□□□ -1.24
CRNDE-208ENST00000560029 ASGR2P07307 311 aa7.31□□□□□ -1.24
CRNDE-208ENST00000560029 ADAM17P78536 824 aa7.31□□□□□ -1.24
CRNDE-208ENST00000560029 SF1Q15637 639 aaKnown RBP7.31□□□□□ -1.24
CRNDE-208ENST00000560029 CARFQ8N187 725 aa7.31□□□□□ -1.24
CRNDE-208ENST00000560029 RNPC3Q96LT9 517 aaKnown RBP7.31□□□□□ -1.24
CRNDE-208ENST00000560029 AARSD1Q9BTE6 412 aaKnown RBP7.31□□□□□ -1.24
CRNDE-208ENST00000560029 NKX2-4Q9H2Z4 354 aa7.31□□□□□ -1.24
CRNDE-208ENST00000560029 SMPD4Q9NXE4 827 aa7.31□□□□□ -1.24
CRNDE-208ENST00000560029 TRAV20A0A0B4J274 112 aa7.3□□□□□ -1.24
CRNDE-208ENST00000560029 LOC105371045A0A1W2PR82 267 aa7.3□□□□□ -1.24
CRNDE-208ENST00000560029 TLDC2A0PJX2 215 aa7.3□□□□□ -1.24
CRNDE-208ENST00000560029 SH3D21A4FU49 640 aa7.3□□□□□ -1.24
CRNDE-208ENST00000560029 SRGAP3O43295 1099 aa7.3□□□□□ -1.24
CRNDE-208ENST00000560029 FSHBP01225 129 aa7.3□□□□□ -1.24
CRNDE-208ENST00000560029 CAPNS1P04632 268 aa7.3□□□□□ -1.24
CRNDE-208ENST00000560029 NOP2P46087 812 aaKnown RBP7.3□□□□□ -1.24
CRNDE-208ENST00000560029 KCNJ6P48051 423 aa7.3□□□□□ -1.24
CRNDE-208ENST00000560029 C2orf27AQ580R0 203 aa7.3□□□□□ -1.24
CRNDE-208ENST00000560029 FOXB2Q5VYV0 432 aa7.3□□□□□ -1.24
CRNDE-208ENST00000560029 ZBTB38Q8NAP3 1195 aaPredicted RBP7.3□□□□□ -1.24
CRNDE-208ENST00000560029 THAP3Q8WTV1 239 aaPredicted RBP7.3□□□□□ -1.24
CRNDE-208ENST00000560029 NOX5Q96PH1 765 aa7.3□□□□□ -1.24
CRNDE-208ENST00000560029 IER2Q9BTL4 223 aa7.3□□□□□ -1.24
CRNDE-208ENST00000560029 TBX22Q9Y458 520 aa7.3□□□□□ -1.24
CRNDE-208ENST00000560029 PTCH2Q9Y6C5 1203 aa7.3□□□□□ -1.24
CRNDE-208ENST00000560029 AURKAO14965 403 aa7.29□□□□□ -1.24
CRNDE-208ENST00000560029 MATN3O15232 486 aa7.29□□□□□ -1.24
CRNDE-208ENST00000560029 PRODHO43272 600 aa7.29□□□□□ -1.24
CRNDE-208ENST00000560029 SMARCA5O60264 1052 aaPredicted RBP7.29□□□□□ -1.24
CRNDE-208ENST00000560029 ITGB3P05106 788 aa7.29□□□□□ -1.24
CRNDE-208ENST00000560029 SNRPB2P08579 225 aaKnown RBP7.29□□□□□ -1.24
CRNDE-208ENST00000560029 NCAM1P13591 858 aa7.29□□□□□ -1.24
CRNDE-208ENST00000560029 ECI1P42126 302 aa7.29□□□□□ -1.24
CRNDE-208ENST00000560029 SCRN1Q12765 414 aa7.29□□□□□ -1.24
CRNDE-208ENST00000560029 JMYQ8N9B5 988 aa7.29□□□□□ -1.24
CRNDE-208ENST00000560029 ALG3Q92685 438 aa7.29□□□□□ -1.24
CRNDE-208ENST00000560029 CDC6Q99741 560 aa7.29□□□□□ -1.24
CRNDE-208ENST00000560029 CYP26B1Q9NR63 512 aa7.29□□□□□ -1.24
CRNDE-208ENST00000560029 CNOT11Q9UKZ1 510 aaKnown RBP7.29□□□□□ -1.24
CRNDE-208ENST00000560029 TMA7Q9Y2S6 64 aaKnown RBP7.29□□□□□ -1.24
CRNDE-208ENST00000560029 C2orf71A6NGG8 1288 aa7.28□□□□□ -1.24
CRNDE-208ENST00000560029 FGF10O15520 208 aaPredicted RBP7.28□□□□□ -1.24
CRNDE-208ENST00000560029 HOXC12P31275 282 aa7.28□□□□□ -1.24
CRNDE-208ENST00000560029 L1CAMP32004 1257 aa7.28□□□□□ -1.24
CRNDE-208ENST00000560029 GJA9P57773 515 aa7.28□□□□□ -1.24
CRNDE-208ENST00000560029 CYP4F3Q08477 520 aa7.28□□□□□ -1.24
CRNDE-208ENST00000560029 SQSTM1Q13501 440 aa7.28□□□□□ -1.24
CRNDE-208ENST00000560029 PRSS53Q2L4Q9 553 aa7.28□□□□□ -1.24
CRNDE-208ENST00000560029 FAM209AQ5JX71 171 aa7.28□□□□□ -1.24
CRNDE-208ENST00000560029 SLC16A11Q8NCK7 471 aa7.28□□□□□ -1.24
CRNDE-208ENST00000560029 GPRC5CQ9NQ84 441 aa7.28□□□□□ -1.24
CRNDE-208ENST00000560029 BACE2Q9Y5Z0 518 aa7.28□□□□□ -1.24
CRNDE-208ENST00000560029 ESYT3A0FGR9 886 aa7.27□□□□□ -1.25
CRNDE-208ENST00000560029 SUV39H1O43463 412 aa7.27□□□□□ -1.25
CRNDE-208ENST00000560029 FGFR1P11362 822 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms