RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 CYP2C8P10632 490 aa5.91□□□□□ -1.46
SPG11-218ENST00000559754 BCL6P41182 706 aa5.91□□□□□ -1.46
SPG11-218ENST00000559754 MAP4K2Q12851 820 aa5.91□□□□□ -1.46
SPG11-218ENST00000559754 ZC3H18Q86VM9 953 aaKnown RBP5.91□□□□□ -1.46
SPG11-218ENST00000559754 CCDC103Q8IW40 242 aa5.91□□□□□ -1.46
SPG11-218ENST00000559754 KREMEN2Q8NCW0 462 aa5.91□□□□□ -1.46
SPG11-218ENST00000559754 KCTD13Q8WZ19 329 aa5.91□□□□□ -1.46
SPG11-218ENST00000559754 SGSM3Q96HU1 749 aa5.91□□□□□ -1.46
SPG11-218ENST00000559754 NGRNQ9NPE2 291 aaKnown RBP5.91□□□□□ -1.46
SPG11-218ENST00000559754 ST7Q9NRC1 585 aa5.91□□□□□ -1.46
SPG11-218ENST00000559754 IGSF5Q9NSI5 407 aa5.91□□□□□ -1.46
SPG11-218ENST00000559754 TMEFF2Q9UIK5 374 aaPredicted RBP5.91□□□□□ -1.46
SPG11-218ENST00000559754 SIT1Q9Y3P8 196 aa5.91□□□□□ -1.46
SPG11-218ENST00000559754 A0A0G2JLL6 359 aaPredicted RBP5.9□□□□□ -1.46
SPG11-218ENST00000559754 OTOL1A6NHN0 477 aaPredicted RBP5.9□□□□□ -1.46
SPG11-218ENST00000559754 PRRG2O14669 202 aa5.9□□□□□ -1.46
SPG11-218ENST00000559754 SGSM2O43147 1006 aa5.9□□□□□ -1.46
SPG11-218ENST00000559754 FPR2P25090 351 aa5.9□□□□□ -1.46
SPG11-218ENST00000559754 SLURP1P55000 103 aa5.9□□□□□ -1.46
SPG11-218ENST00000559754 PPP2R2AP63151 447 aa5.9□□□□□ -1.46
SPG11-218ENST00000559754 LSAMPQ13449 338 aa5.9□□□□□ -1.46
SPG11-218ENST00000559754 PRSS53Q2L4Q9 553 aa5.9□□□□□ -1.46
SPG11-218ENST00000559754 LIPIQ6XZB0 460 aa5.9□□□□□ -1.46
SPG11-218ENST00000559754 TTLL7Q6ZT98 887 aa5.9□□□□□ -1.46
SPG11-218ENST00000559754 FRMD5Q7Z6J6 570 aa5.9□□□□□ -1.46
SPG11-218ENST00000559754 MIB1Q86YT6 1006 aa5.9□□□□□ -1.46
SPG11-218ENST00000559754 CELF2-AS1Q8N7Q2 184 aa5.9□□□□□ -1.46
SPG11-218ENST00000559754 TMEM145Q8NBT3 493 aa5.9□□□□□ -1.46
SPG11-218ENST00000559754 FEZF2Q8TBJ5 459 aa5.9□□□□□ -1.46
SPG11-218ENST00000559754 DDX11Q96FC9 970 aa5.9□□□□□ -1.46
SPG11-218ENST00000559754 CHAMP1Q96JM3 812 aa5.9□□□□□ -1.46
SPG11-218ENST00000559754 NCANO14594 1321 aa5.9□□□□□ -1.47
SPG11-218ENST00000559754 A0A1W2PQU0 124 aa5.89□□□□□ -1.47
SPG11-218ENST00000559754 KRTAP9-7A8MTY7 169 aa5.89□□□□□ -1.47
SPG11-218ENST00000559754 KLF4O43474 513 aa5.89□□□□□ -1.47
SPG11-218ENST00000559754 SMARCA5O60264 1052 aaPredicted RBP5.89□□□□□ -1.47
SPG11-218ENST00000559754 SYN1P17600 705 aa5.89□□□□□ -1.47
SPG11-218ENST00000559754 ZC3H6P61129 1189 aaKnown RBP5.89□□□□□ -1.47
SPG11-218ENST00000559754 HSP90AA2PQ14568 343 aaPredicted RBP5.89□□□□□ -1.47
SPG11-218ENST00000559754 SF1Q15637 639 aaKnown RBP5.89□□□□□ -1.47
SPG11-218ENST00000559754 SLC35F1Q5T1Q4 408 aa5.89□□□□□ -1.47
SPG11-218ENST00000559754 MILR1Q7Z6M3 343 aa5.89□□□□□ -1.47
SPG11-218ENST00000559754 RCBTB1Q8NDN9 531 aa5.89□□□□□ -1.47
SPG11-218ENST00000559754 CXorf38Q8TB03 319 aa5.89□□□□□ -1.47
SPG11-218ENST00000559754 TEPSINQ96N21 525 aa5.89□□□□□ -1.47
SPG11-218ENST00000559754 TRIM55Q9BYV6 548 aa5.89□□□□□ -1.47
SPG11-218ENST00000559754 PALD1Q9ULE6 856 aa5.89□□□□□ -1.47
SPG11-218ENST00000559754 ZNF652Q9Y2D9 606 aa5.89□□□□□ -1.47
SPG11-218ENST00000559754 PCDHA2Q9Y5H9 948 aa5.89□□□□□ -1.47
SPG11-218ENST00000559754 NPFFR2Q9Y5X5 522 aa5.89□□□□□ -1.47
SPG11-218ENST00000559754 CAPNS1P04632 268 aa5.88□□□□□ -1.47
SPG11-218ENST00000559754 RAB33AQ14088 237 aa5.88□□□□□ -1.47
SPG11-218ENST00000559754 NLRP10Q86W26 655 aa5.88□□□□□ -1.47
SPG11-218ENST00000559754 ZDHHC14Q8IZN3 488 aa5.88□□□□□ -1.47
SPG11-218ENST00000559754 SYT8Q8NBV8 401 aa5.88□□□□□ -1.47
SPG11-218ENST00000559754 ST13P5Q8NFI4 369 aaPredicted RBP5.88□□□□□ -1.47
SPG11-218ENST00000559754 ZNF526Q8TF50 670 aaPredicted RBP5.88□□□□□ -1.47
SPG11-218ENST00000559754 ZBTB8AQ96BR9 441 aa5.88□□□□□ -1.47
SPG11-218ENST00000559754 C1orf159Q96HA4 380 aa5.88□□□□□ -1.47
SPG11-218ENST00000559754 YIPF4Q9BSR8 244 aa5.88□□□□□ -1.47
SPG11-218ENST00000559754 USP40Q9NVE5 1235 aa5.88□□□□□ -1.47
SPG11-218ENST00000559754 NTMQ9P121 344 aa5.88□□□□□ -1.47
SPG11-218ENST00000559754 ARNTLO00327 626 aa5.87□□□□□ -1.47
SPG11-218ENST00000559754 HGSO14964 777 aaPredicted RBP5.87□□□□□ -1.47
SPG11-218ENST00000559754 FOXD2O60548 495 aaPredicted RBP5.87□□□□□ -1.47
SPG11-218ENST00000559754 MAFKO60675 156 aa5.87□□□□□ -1.47
SPG11-218ENST00000559754 DGKIO75912 1065 aa5.87□□□□□ -1.47
SPG11-218ENST00000559754 STK10O94804 968 aaKnown RBP5.87□□□□□ -1.47
SPG11-218ENST00000559754 C8BP07358 591 aa5.87□□□□□ -1.47
SPG11-218ENST00000559754 SARSP49591 514 aaKnown RBP5.87□□□□□ -1.47
SPG11-218ENST00000559754 RSPO2Q6UXX9 243 aaPredicted RBP5.87□□□□□ -1.47
SPG11-218ENST00000559754 CD300LDQ6UXZ3 194 aa5.87□□□□□ -1.47
SPG11-218ENST00000559754 FAM126BQ8IXS8 530 aa5.87□□□□□ -1.47
SPG11-218ENST00000559754 CKAP2LQ8IYA6 745 aa5.87□□□□□ -1.47
SPG11-218ENST00000559754 CARFQ8N187 725 aa5.87□□□□□ -1.47
SPG11-218ENST00000559754 LRRC47Q8N1G4 583 aaKnown RBP5.87□□□□□ -1.47
SPG11-218ENST00000559754 TTLL6Q8N841 843 aa5.87□□□□□ -1.47
SPG11-218ENST00000559754 LINC00482Q8N8I6 264 aa5.87□□□□□ -1.47
SPG11-218ENST00000559754 AARSD1Q9BTE6 412 aaKnown RBP5.87□□□□□ -1.47
SPG11-218ENST00000559754 IER2Q9BTL4 223 aa5.87□□□□□ -1.47
SPG11-218ENST00000559754 GPR27Q9NS67 375 aa5.87□□□□□ -1.47
SPG11-218ENST00000559754 CLDND1Q9NY35 253 aa5.87□□□□□ -1.47
SPG11-218ENST00000559754 ADAMTS20P59510 1910 aa5.87□□□□□ -1.47
SPG11-218ENST00000559754 U2SURPO15042 1029 aaKnown RBP5.86□□□□□ -1.47
SPG11-218ENST00000559754 DLX2Q07687 328 aaPredicted RBP5.86□□□□□ -1.47
SPG11-218ENST00000559754 EMC4Q5J8M3 183 aa5.86□□□□□ -1.47
SPG11-218ENST00000559754 STEAP3Q658P3 488 aa5.86□□□□□ -1.47
SPG11-218ENST00000559754 DENND5AQ6IQ26 1287 aa5.86□□□□□ -1.47
SPG11-218ENST00000559754 ADGRG2Q8IZP9 1017 aa5.86□□□□□ -1.47
SPG11-218ENST00000559754 KYQ8NBH2 561 aa5.86□□□□□ -1.47
SPG11-218ENST00000559754 ZNF669Q96BR6 464 aaPredicted RBP5.86□□□□□ -1.47
SPG11-218ENST00000559754 NOX5Q96PH1 765 aa5.86□□□□□ -1.47
SPG11-218ENST00000559754 SPATA25Q9BR10 227 aa5.86□□□□□ -1.47
SPG11-218ENST00000559754 C11orf84Q9BUA3 381 aaPredicted RBP5.86□□□□□ -1.47
SPG11-218ENST00000559754 EPB41L1Q9H4G0 881 aa5.86□□□□□ -1.47
SPG11-218ENST00000559754 A0A1B0GTL3 188 aa5.85□□□□□ -1.47
SPG11-218ENST00000559754 FGFR1P11362 822 aa5.85□□□□□ -1.47
SPG11-218ENST00000559754 LCP1P13796 627 aa5.85□□□□□ -1.47
SPG11-218ENST00000559754 GRIA2P42262 883 aa5.85□□□□□ -1.47
SPG11-218ENST00000559754 GJA9P57773 515 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms