RNA–Protein interactions for RNA: ENST00000559037.1

CASC4-207, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 680 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-207ENST00000559037 DHX38Q92620 1227 aaKnown RBP6.75□□□□□ -1.33
CASC4-207ENST00000559037 NBPF4Q96M43 638 aa6.75□□□□□ -1.33
CASC4-207ENST00000559037 SLC9A7Q96T83 725 aa6.75□□□□□ -1.33
CASC4-207ENST00000559037 SRRTQ9BXP5 876 aaKnown RBP6.75□□□□□ -1.33
CASC4-207ENST00000559037 ANTXR1Q9H6X2 564 aa6.75□□□□□ -1.33
CASC4-207ENST00000559037 TMEM59LQ9UK28 342 aa6.75□□□□□ -1.33
CASC4-207ENST00000559037 PPT2Q9UMR5 302 aa6.75□□□□□ -1.33
CASC4-207ENST00000559037 CTNND2Q9UQB3 1225 aa6.75□□□□□ -1.33
CASC4-207ENST00000559037 TAF1LQ8IZX4 1826 aa6.75□□□□□ -1.33
CASC4-207ENST00000559037 INSRP06213 1382 aa6.74□□□□□ -1.33
CASC4-207ENST00000559037 ERCC5P28715 1186 aaPredicted RBP6.74□□□□□ -1.33
CASC4-207ENST00000559037 TXKP42681 527 aa6.74□□□□□ -1.33
CASC4-207ENST00000559037 PMS1P54277 932 aaKnown RBP6.74□□□□□ -1.33
CASC4-207ENST00000559037 EIF6P56537 245 aaKnown RBP6.74□□□□□ -1.33
CASC4-207ENST00000559037 TXNRD1Q16881 649 aa6.74□□□□□ -1.33
CASC4-207ENST00000559037 C9orf131Q5VYM1 1079 aa6.74□□□□□ -1.33
CASC4-207ENST00000559037 LSRQ86X29 649 aaPredicted RBP6.74□□□□□ -1.33
CASC4-207ENST00000559037 HDAC8Q9BY41 377 aa6.74□□□□□ -1.33
CASC4-207ENST00000559037 MKRN2Q9H000 416 aaKnown RBP6.74□□□□□ -1.33
CASC4-207ENST00000559037 PANK3Q9H999 370 aa6.74□□□□□ -1.33
CASC4-207ENST00000559037 PCDHB12Q9Y5F1 795 aa6.74□□□□□ -1.33
CASC4-207ENST00000559037 CASZ1Q86V15 1759 aa6.74□□□□□ -1.33
CASC4-207ENST00000559037 RTL1A6NKG5 1358 aa6.73□□□□□ -1.33
CASC4-207ENST00000559037 SIGLEC6O43699 453 aa6.73□□□□□ -1.33
CASC4-207ENST00000559037 LRRN2O75325 713 aa6.73□□□□□ -1.33
CASC4-207ENST00000559037 ACRP10323 421 aa6.73□□□□□ -1.33
CASC4-207ENST00000559037 GIPRP48546 466 aa6.73□□□□□ -1.33
CASC4-207ENST00000559037 EGR3Q06889 387 aa6.73□□□□□ -1.33
CASC4-207ENST00000559037 DUSP4Q13115 394 aa6.73□□□□□ -1.33
CASC4-207ENST00000559037 RNF111Q6ZNA4 994 aa6.73□□□□□ -1.33
CASC4-207ENST00000559037 VPS37DQ86XT2 251 aa6.73□□□□□ -1.33
CASC4-207ENST00000559037 TMEM192Q8IY95 271 aa6.73□□□□□ -1.33
CASC4-207ENST00000559037 ZCRB1Q8TBF4 217 aaKnown RBP6.73□□□□□ -1.33
CASC4-207ENST00000559037 PRDM7Q9NQW5 492 aa6.73□□□□□ -1.33
CASC4-207ENST00000559037 RNF114Q9Y508 228 aa6.73□□□□□ -1.33
CASC4-207ENST00000559037 NSD3Q9BZ95 1437 aa6.73□□□□□ -1.33
CASC4-207ENST00000559037 TUBGCP6Q96RT7 1819 aa6.73□□□□□ -1.33
CASC4-207ENST00000559037 CGNL1Q0VF96 1302 aa6.73□□□□□ -1.33
CASC4-207ENST00000559037 WASHC2AQ641Q2 1341 aa6.73□□□□□ -1.33
CASC4-207ENST00000559037 QSER1Q2KHR3 1735 aa6.73□□□□□ -1.33
CASC4-207ENST00000559037 DOT1LQ8TEK3 1739 aa6.73□□□□□ -1.33
CASC4-207ENST00000559037 CHD4Q14839 1912 aa6.72□□□□□ -1.33
CASC4-207ENST00000559037 CENPBP07199 599 aaPredicted RBP6.72□□□□□ -1.33
CASC4-207ENST00000559037 RBM25P49756 843 aaKnown RBP6.72□□□□□ -1.33
CASC4-207ENST00000559037 ACBD3Q9H3P7 528 aa6.72□□□□□ -1.33
CASC4-207ENST00000559037 PHAXQ9H814 394 aaKnown RBP6.72□□□□□ -1.33
CASC4-207ENST00000559037 CAPN10Q9HC96 672 aa6.72□□□□□ -1.33
CASC4-207ENST00000559037 FAM53CQ9NYF3 392 aa6.72□□□□□ -1.33
CASC4-207ENST00000559037 SLAMF8Q9P0V8 285 aa6.72□□□□□ -1.33
CASC4-207ENST00000559037 POLKQ9UBT6 870 aa6.72□□□□□ -1.33
CASC4-207ENST00000559037 PCDHA11Q9Y5I1 949 aa6.72□□□□□ -1.33
CASC4-207ENST00000559037 COL24A1Q17RW2 1714 aa6.72□□□□□ -1.33
CASC4-207ENST00000559037 PKD1L3Q7Z443 1732 aa6.72□□□□□ -1.33
CASC4-207ENST00000559037 MEGF6O75095 1541 aa6.71□□□□□ -1.33
CASC4-207ENST00000559037 FLT4P35916 1363 aa6.71□□□□□ -1.33
CASC4-207ENST00000559037 NCAPD2Q15021 1401 aa6.71□□□□□ -1.34
CASC4-207ENST00000559037 SHISA3A0PJX4 238 aa6.71□□□□□ -1.34
CASC4-207ENST00000559037 E9PSI1 815 aa6.71□□□□□ -1.34
CASC4-207ENST00000559037 NASPP49321 788 aaPredicted RBP6.71□□□□□ -1.34
CASC4-207ENST00000559037 PCBP3P57721 371 aaKnown RBP6.71□□□□□ -1.34
CASC4-207ENST00000559037 AUHQ13825 339 aaKnown RBP6.71□□□□□ -1.34
CASC4-207ENST00000559037 ANKRD39Q53RE8 183 aa6.71□□□□□ -1.34
CASC4-207ENST00000559037 LCE3BQ5TA77 95 aa6.71□□□□□ -1.34
CASC4-207ENST00000559037 ZSWIM9Q86XI8 627 aa6.71□□□□□ -1.34
CASC4-207ENST00000559037 LILRA2Q8N149 483 aa6.71□□□□□ -1.34
CASC4-207ENST00000559037 OXR1Q8N573 874 aa6.71□□□□□ -1.34
CASC4-207ENST00000559037 LINC00116Q8NCU8 138 aa6.71□□□□□ -1.34
CASC4-207ENST00000559037 PDZD8Q8NEN9 1154 aa6.71□□□□□ -1.34
CASC4-207ENST00000559037 CPLX3Q8WVH0 158 aa6.71□□□□□ -1.34
CASC4-207ENST00000559037 FAM168AQ92567 244 aa6.71□□□□□ -1.34
CASC4-207ENST00000559037 POLR3GLQ9BT43 218 aa6.71□□□□□ -1.34
CASC4-207ENST00000559037 PAPPAQ13219 1627 aa6.7□□□□□ -1.34
CASC4-207ENST00000559037 CHRNEQ04844 493 aa6.7□□□□□ -1.34
CASC4-207ENST00000559037 SLC15A2Q16348 729 aa6.7□□□□□ -1.34
CASC4-207ENST00000559037 KCNMB1Q16558 191 aa6.7□□□□□ -1.34
CASC4-207ENST00000559037 UNC5AQ6ZN44 842 aa6.7□□□□□ -1.34
CASC4-207ENST00000559037 CCDC81Q6ZN84 652 aa6.7□□□□□ -1.34
CASC4-207ENST00000559037 TTC6Q86TZ1 520 aa6.7□□□□□ -1.34
CASC4-207ENST00000559037 SPPL2CQ8IUH8 684 aa6.7□□□□□ -1.34
CASC4-207ENST00000559037 CCDC144CPQ8IYA2 1237 aa6.7□□□□□ -1.34
CASC4-207ENST00000559037 C7orf61Q8IZ16 206 aa6.7□□□□□ -1.34
CASC4-207ENST00000559037 USHBP1Q8N6Y0 703 aa6.7□□□□□ -1.34
CASC4-207ENST00000559037 RAPGEF4Q8WZA2 1011 aa6.7□□□□□ -1.34
CASC4-207ENST00000559037 PDGFDQ9GZP0 370 aaPredicted RBP6.7□□□□□ -1.34
CASC4-207ENST00000559037 PRDM14Q9GZV8 571 aa6.7□□□□□ -1.34
CASC4-207ENST00000559037 CHST7Q9NS84 486 aa6.7□□□□□ -1.34
CASC4-207ENST00000559037 C19orf73Q9NVV2 129 aa6.7□□□□□ -1.34
CASC4-207ENST00000559037 ZNF214Q9UL59 606 aaPredicted RBP6.7□□□□□ -1.34
CASC4-207ENST00000559037 ZNF281Q9Y2X9 895 aa6.7□□□□□ -1.34
CASC4-207ENST00000559037 MYH14Q7Z406 1995 aaKnown RBP6.69□□□□□ -1.34
CASC4-207ENST00000559037 SSU72P8A0A1W2PR75 194 aa6.69□□□□□ -1.34
CASC4-207ENST00000559037 FITM1A5D6W6 292 aa6.69□□□□□ -1.34
CASC4-207ENST00000559037 PPM1GO15355 546 aaPredicted RBP6.69□□□□□ -1.34
CASC4-207ENST00000559037 CYP27B1O15528 508 aa6.69□□□□□ -1.34
CASC4-207ENST00000559037 PRAMEF1O95521 474 aa6.69□□□□□ -1.34
CASC4-207ENST00000559037 HPXP02790 462 aa6.69□□□□□ -1.34
CASC4-207ENST00000559037 ATF4P18848 351 aaPredicted RBP6.69□□□□□ -1.34
CASC4-207ENST00000559037 CASP7P55210 303 aa6.69□□□□□ -1.34
CASC4-207ENST00000559037 TEKQ02763 1124 aa6.69□□□□□ -1.34
CASC4-207ENST00000559037 NR0B2Q15466 257 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms