RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 SLIT3O75094 1523 aa17.05■□□□□ 0.32
AP4E1-202ENST00000558439 NDUFAB1O14561 156 aa17.05■□□□□ 0.32
AP4E1-202ENST00000558439 FNBP4Q8N3X1 1017 aaPredicted RBP17.05■□□□□ 0.32
AP4E1-202ENST00000558439 LMBR1Q8WVP7 490 aa17.05■□□□□ 0.32
AP4E1-202ENST00000558439 ZNF446Q9NWS9 450 aa17.05■□□□□ 0.32
AP4E1-202ENST00000558439 SFI1A8K8P3 1242 aa17.05■□□□□ 0.32
AP4E1-202ENST00000558439 STXBP3O00186 592 aa17.05■□□□□ 0.32
AP4E1-202ENST00000558439 NEDD1Q8NHV4 660 aa17.05■□□□□ 0.32
AP4E1-202ENST00000558439 CCSER1Q9C0I3 900 aa17.05■□□□□ 0.32
AP4E1-202ENST00000558439 PMS1P54277 932 aaKnown RBP17.04■□□□□ 0.32
AP4E1-202ENST00000558439 GFPT1Q06210 699 aaPredicted RBP17.04■□□□□ 0.32
AP4E1-202ENST00000558439 NAA35Q5VZE5 725 aa17.04■□□□□ 0.32
AP4E1-202ENST00000558439 PEX26Q7Z412 305 aa17.04■□□□□ 0.32
AP4E1-202ENST00000558439 ELOA2Q8IYF1 753 aaPredicted RBP17.04■□□□□ 0.32
AP4E1-202ENST00000558439 BBXQ8WY36 941 aaPredicted RBP17.04■□□□□ 0.32
AP4E1-202ENST00000558439 KIFC2Q96AC6 838 aa17.04■□□□□ 0.32
AP4E1-202ENST00000558439 KRT12Q99456 494 aa17.04■□□□□ 0.32
AP4E1-202ENST00000558439 NAP1L4Q99733 375 aaKnown RBP17.04■□□□□ 0.32
AP4E1-202ENST00000558439 RDXP35241 583 aaKnown RBP17.04■□□□□ 0.32
AP4E1-202ENST00000558439 EMILIN3Q9NT22 766 aa17.04■□□□□ 0.32
AP4E1-202ENST00000558439 CAPN11Q9UMQ6 739 aa17.04■□□□□ 0.32
AP4E1-202ENST00000558439 FRMD4BQ9Y2L6 1034 aa17.04■□□□□ 0.32
AP4E1-202ENST00000558439 JRKLQ9Y4A0 524 aa17.04■□□□□ 0.32
AP4E1-202ENST00000558439 CALUO43852 315 aaPredicted RBP17.04■□□□□ 0.32
AP4E1-202ENST00000558439 BBOX1O75936 387 aa17.04■□□□□ 0.32
AP4E1-202ENST00000558439 TBC1D8O95759 1140 aa17.04■□□□□ 0.32
AP4E1-202ENST00000558439 PLA2G4BP0C869 781 aa17.04■□□□□ 0.32
AP4E1-202ENST00000558439 HOXA13P31271 388 aaPredicted RBP17.04■□□□□ 0.32
AP4E1-202ENST00000558439 TBC1D10BQ4KMP7 808 aaPredicted RBP17.04■□□□□ 0.32
AP4E1-202ENST00000558439 UNC13DQ70J99 1090 aa17.04■□□□□ 0.32
AP4E1-202ENST00000558439 DUSP10Q9Y6W6 482 aa17.04■□□□□ 0.32
AP4E1-202ENST00000558439 KDM3AQ9Y4C1 1321 aa17.04■□□□□ 0.32
AP4E1-202ENST00000558439 TBX2Q13207 712 aaPredicted RBP17.03■□□□□ 0.32
AP4E1-202ENST00000558439 CDKAL1Q5VV42 579 aa17.03■□□□□ 0.32
AP4E1-202ENST00000558439 NFRKBQ6P4R8 1299 aa17.03■□□□□ 0.32
AP4E1-202ENST00000558439 FBXO11Q86XK2 927 aa17.03■□□□□ 0.32
AP4E1-202ENST00000558439 MAD2L2Q9UI95 211 aa17.03■□□□□ 0.32
AP4E1-202ENST00000558439 EXOC3O60645 756 aa17.03■□□□□ 0.32
AP4E1-202ENST00000558439 TNFAIP3P21580 790 aa17.03■□□□□ 0.32
AP4E1-202ENST00000558439 GPATCH4Q5T3I0 446 aaKnown RBP17.03■□□□□ 0.32
AP4E1-202ENST00000558439 PDXDC2PQ6P474 469 aa17.03■□□□□ 0.32
AP4E1-202ENST00000558439 PNKPQ96T60 521 aa17.03■□□□□ 0.32
AP4E1-202ENST00000558439 MED4Q9NPJ6 270 aa17.03■□□□□ 0.32
AP4E1-202ENST00000558439 HOMER2Q9NSB8 354 aa17.03■□□□□ 0.32
AP4E1-202ENST00000558439 GOLGA6L10A0A0M3HER8 536 aa17.03■□□□□ 0.32
AP4E1-202ENST00000558439 VGLL3A8MV65 326 aa17.03■□□□□ 0.32
AP4E1-202ENST00000558439 TRIM37O94972 964 aa17.03■□□□□ 0.32
AP4E1-202ENST00000558439 ACTN2P35609 894 aa17.03■□□□□ 0.32
AP4E1-202ENST00000558439 NT5DC1Q5TFE4 455 aa17.03■□□□□ 0.32
AP4E1-202ENST00000558439 TMC4Q7Z404 712 aa17.03■□□□□ 0.32
AP4E1-202ENST00000558439 MXD3Q9BW11 206 aa17.03■□□□□ 0.32
AP4E1-202ENST00000558439 EPB41L5Q9HCM4 733 aa17.03■□□□□ 0.32
AP4E1-202ENST00000558439 PNMA6FA0A0J9YX94 578 aa17.03■□□□□ 0.32
AP4E1-202ENST00000558439 FAM237AA0A1B0GTK4 181 aa17.03■□□□□ 0.32
AP4E1-202ENST00000558439 GSTTP1A0A1W2PQM5 241 aa17.03■□□□□ 0.32
AP4E1-202ENST00000558439 POTEB3A0JP26 581 aa17.03■□□□□ 0.32
AP4E1-202ENST00000558439 POTECB2RU33 542 aa17.03■□□□□ 0.32
AP4E1-202ENST00000558439 PPEF1O14829 653 aaPredicted RBP17.03■□□□□ 0.32
AP4E1-202ENST00000558439 KCNB1Q14721 858 aa17.03■□□□□ 0.32
AP4E1-202ENST00000558439 POTEBQ6S5H4 581 aa17.03■□□□□ 0.32
AP4E1-202ENST00000558439 CCDC25Q86WR0 208 aa17.03■□□□□ 0.32
AP4E1-202ENST00000558439 IL17RBQ9NRM6 502 aa17.03■□□□□ 0.32
AP4E1-202ENST00000558439 SMARCAL1Q9NZC9 954 aa17.03■□□□□ 0.32
AP4E1-202ENST00000558439 N4BP1O75113 896 aaKnown RBP17.02■□□□□ 0.32
AP4E1-202ENST00000558439 FLOT1O75955 427 aa17.02■□□□□ 0.32
AP4E1-202ENST00000558439 PRPF6O94906 941 aaKnown RBP17.02■□□□□ 0.32
AP4E1-202ENST00000558439 RHOBTB3O94955 611 aa17.02■□□□□ 0.32
AP4E1-202ENST00000558439 PLEKP08567 350 aaPredicted RBP17.02■□□□□ 0.32
AP4E1-202ENST00000558439 CCDC172P0C7W6 258 aa17.02■□□□□ 0.32
AP4E1-202ENST00000558439 STAT3P40763 770 aa17.02■□□□□ 0.32
AP4E1-202ENST00000558439 EXOC4Q96A65 974 aa17.02■□□□□ 0.32
AP4E1-202ENST00000558439 HSD3B7Q9H2F3 369 aa17.02■□□□□ 0.32
AP4E1-202ENST00000558439 DCCP43146 1447 aa17.02■□□□□ 0.32
AP4E1-202ENST00000558439 GNGT1P63211 74 aa17.02■□□□□ 0.32
AP4E1-202ENST00000558439 PAK2Q13177 524 aa17.02■□□□□ 0.32
AP4E1-202ENST00000558439 EXOC3L4Q17RC7 722 aa17.02■□□□□ 0.32
AP4E1-202ENST00000558439 GIMAP8Q8ND71 665 aaPredicted RBP17.02■□□□□ 0.32
AP4E1-202ENST00000558439 RIN2Q8WYP3 895 aaPredicted RBP17.02■□□□□ 0.32
AP4E1-202ENST00000558439 GLT8D2Q9H1C3 349 aa17.02■□□□□ 0.32
AP4E1-202ENST00000558439 RIC8AQ9NPQ8 531 aa17.02■□□□□ 0.32
AP4E1-202ENST00000558439 MYMKA6NI61 221 aa17.02■□□□□ 0.31
AP4E1-202ENST00000558439 DAAM2Q86T65 1068 aa17.02■□□□□ 0.31
AP4E1-202ENST00000558439 NUCKS1Q9H1E3 243 aaKnown RBP17.02■□□□□ 0.31
AP4E1-202ENST00000558439 ARHGEF35A5YM69 484 aa17.01■□□□□ 0.31
AP4E1-202ENST00000558439 ZBTB22O15209 634 aa17.01■□□□□ 0.31
AP4E1-202ENST00000558439 GJC1P36383 396 aa17.01■□□□□ 0.31
AP4E1-202ENST00000558439 CCDC93Q567U6 631 aa17.01■□□□□ 0.31
AP4E1-202ENST00000558439 CCDC155Q8N6L0 562 aa17.01■□□□□ 0.31
AP4E1-202ENST00000558439 GOLGA5Q8TBA6 731 aa17.01■□□□□ 0.31
AP4E1-202ENST00000558439 BICD1Q96G01 975 aa17.01■□□□□ 0.31
AP4E1-202ENST00000558439 PACSIN2Q9UNF0 486 aaPredicted RBP17.01■□□□□ 0.31
AP4E1-202ENST00000558439 GOLGA6L7A0A1B0GV03 622 aa17.01■□□□□ 0.31
AP4E1-202ENST00000558439 A0A1W2PQC6 194 aa17.01■□□□□ 0.31
AP4E1-202ENST00000558439 PPFIA1Q13136 1202 aa17.01■□□□□ 0.31
AP4E1-202ENST00000558439 ADGRF4Q8IZF3 695 aa17.01■□□□□ 0.31
AP4E1-202ENST00000558439 BCAS4Q8TDM0 211 aa17.01■□□□□ 0.31
AP4E1-202ENST00000558439 ESYT3A0FGR9 886 aa17.01■□□□□ 0.31
AP4E1-202ENST00000558439 TCP10L2B9ZVM9 353 aa17.01■□□□□ 0.31
AP4E1-202ENST00000558439 GNA14O95837 355 aa17.01■□□□□ 0.31
AP4E1-202ENST00000558439 IQCDQ96DY2 449 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms