RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 ARHGAP27Q6ZUM4 889 aa12.35□□□□□ -0.43
PCAT29-201ENST00000558411 C2CD5Q86YS7 1000 aa12.35□□□□□ -0.43
PCAT29-201ENST00000558411 ZNF654Q8IZM8 581 aa12.35□□□□□ -0.43
PCAT29-201ENST00000558411 SHISA4Q96DD7 197 aa12.35□□□□□ -0.43
PCAT29-201ENST00000558411 THOC1Q96FV9 657 aaKnown RBP12.35□□□□□ -0.43
PCAT29-201ENST00000558411 CNOT6LQ96LI5 555 aaKnown RBP12.35□□□□□ -0.43
PCAT29-201ENST00000558411 INPP4AQ96PE3 977 aaPredicted RBP12.35□□□□□ -0.43
PCAT29-201ENST00000558411 NOC4LQ9BVI4 516 aaKnown RBP12.35□□□□□ -0.43
PCAT29-201ENST00000558411 TMEM59LQ9UK28 342 aa12.35□□□□□ -0.43
PCAT29-201ENST00000558411 A0A0G2JS52 829 aa12.35□□□□□ -0.43
PCAT29-201ENST00000558411 SSU72P8A0A1W2PR75 194 aa12.35□□□□□ -0.43
PCAT29-201ENST00000558411 AHCYL1O43865 530 aa12.35□□□□□ -0.43
PCAT29-201ENST00000558411 FESP07332 822 aa12.35□□□□□ -0.43
PCAT29-201ENST00000558411 CCND1P24385 295 aa12.35□□□□□ -0.43
PCAT29-201ENST00000558411 CCNE1P24864 410 aa12.35□□□□□ -0.43
PCAT29-201ENST00000558411 ECHS1P30084 290 aa12.35□□□□□ -0.43
PCAT29-201ENST00000558411 STAT6P42226 847 aa12.35□□□□□ -0.43
PCAT29-201ENST00000558411 UAP1Q16222 522 aaPredicted RBP12.35□□□□□ -0.43
PCAT29-201ENST00000558411 PKN1Q16512 942 aa12.35□□□□□ -0.43
PCAT29-201ENST00000558411 EDEM3Q9BZQ6 932 aa12.35□□□□□ -0.43
PCAT29-201ENST00000558411 FAM129AQ9BZQ8 928 aa12.35□□□□□ -0.43
PCAT29-201ENST00000558411 KCNMB3Q9NPA1 279 aa12.35□□□□□ -0.43
PCAT29-201ENST00000558411 CPSF2Q9P2I0 782 aaKnown RBP12.35□□□□□ -0.43
PCAT29-201ENST00000558411 CNOT8Q9UFF9 292 aaKnown RBP12.35□□□□□ -0.43
PCAT29-201ENST00000558411 ZNF532Q9HCE3 1301 aa12.34□□□□□ -0.43
PCAT29-201ENST00000558411 WNT7AO00755 349 aa12.34□□□□□ -0.43
PCAT29-201ENST00000558411 RAD51CO43502 376 aa12.34□□□□□ -0.43
PCAT29-201ENST00000558411 KLRC4O43908 158 aa12.34□□□□□ -0.43
PCAT29-201ENST00000558411 MCAMP43121 646 aa12.34□□□□□ -0.43
PCAT29-201ENST00000558411 MTIF2P46199 727 aaKnown RBP12.34□□□□□ -0.43
PCAT29-201ENST00000558411 TCIRG1Q13488 830 aa12.34□□□□□ -0.43
PCAT29-201ENST00000558411 BLMHQ13867 455 aa12.34□□□□□ -0.43
PCAT29-201ENST00000558411 CCDC57Q2TAC2 916 aa12.34□□□□□ -0.43
PCAT29-201ENST00000558411 ASTE1Q2TB18 679 aaPredicted RBP12.34□□□□□ -0.43
PCAT29-201ENST00000558411 SPDYCQ5MJ68 293 aa12.34□□□□□ -0.43
PCAT29-201ENST00000558411 APLFQ8IW19 511 aaPredicted RBP12.34□□□□□ -0.43
PCAT29-201ENST00000558411 IFNL3Q8IZI9 196 aa12.34□□□□□ -0.43
PCAT29-201ENST00000558411 P2RX5Q93086 422 aa12.34□□□□□ -0.43
PCAT29-201ENST00000558411 MTMR8Q96EF0 704 aa12.34□□□□□ -0.43
PCAT29-201ENST00000558411 ZNF570Q96NI8 536 aa12.34□□□□□ -0.43
PCAT29-201ENST00000558411 XPO6Q96QU8 1125 aaKnown RBP12.34□□□□□ -0.43
PCAT29-201ENST00000558411 NAPBQ9H115 298 aa12.34□□□□□ -0.43
PCAT29-201ENST00000558411 LUC7LQ9NQ29 371 aaKnown RBP12.34□□□□□ -0.43
PCAT29-201ENST00000558411 SALL4Q9UJQ4 1053 aa12.34□□□□□ -0.43
PCAT29-201ENST00000558411 GOLGA6L10A0A0M3HER8 536 aa12.34□□□□□ -0.43
PCAT29-201ENST00000558411 TCRBV5S4A2TA0A5A2 114 aa12.34□□□□□ -0.43
PCAT29-201ENST00000558411 ATP2C2O75185 946 aa12.34□□□□□ -0.43
PCAT29-201ENST00000558411 PDE6AP16499 860 aa12.34□□□□□ -0.43
PCAT29-201ENST00000558411 CCNG1P51959 295 aa12.34□□□□□ -0.43
PCAT29-201ENST00000558411 IFI16Q16666 785 aaKnown RBP12.34□□□□□ -0.43
PCAT29-201ENST00000558411 KIAA0753Q2KHM9 967 aa12.34□□□□□ -0.43
PCAT29-201ENST00000558411 PI16Q6UXB8 463 aa12.34□□□□□ -0.43
PCAT29-201ENST00000558411 PIGWQ7Z7B1 504 aa12.34□□□□□ -0.43
PCAT29-201ENST00000558411 TTC5Q8N0Z6 440 aa12.34□□□□□ -0.43
PCAT29-201ENST00000558411 CCDC82Q8N4S0 544 aa12.34□□□□□ -0.43
PCAT29-201ENST00000558411 USP38Q8NB14 1042 aa12.34□□□□□ -0.43
PCAT29-201ENST00000558411 LPIN2Q92539 896 aa12.34□□□□□ -0.43
PCAT29-201ENST00000558411 FAM210AQ96ND0 272 aa12.34□□□□□ -0.43
PCAT29-201ENST00000558411 PSMD1Q99460 953 aa12.34□□□□□ -0.43
PCAT29-201ENST00000558411 SLC5A4Q9NY91 659 aa12.34□□□□□ -0.43
PCAT29-201ENST00000558411 ABCB11O95342 1321 aa12.33□□□□□ -0.44
PCAT29-201ENST00000558411 A6NHS1 94 aa12.33□□□□□ -0.44
PCAT29-201ENST00000558411 PHF20L1A8MW92 1017 aa12.33□□□□□ -0.44
PCAT29-201ENST00000558411 IRF6O14896 467 aa12.33□□□□□ -0.44
PCAT29-201ENST00000558411 EIF3BP55884 814 aaKnown RBP12.33□□□□□ -0.44
PCAT29-201ENST00000558411 ERVK-9P63128 1117 aa12.33□□□□□ -0.44
PCAT29-201ENST00000558411 HLTFQ14527 1009 aaKnown RBP eCLIP12.33□□□□□ -0.44
PCAT29-201ENST00000558411 SEPT2Q15019 361 aa12.33□□□□□ -0.44
PCAT29-201ENST00000558411 IL17AQ16552 155 aa12.33□□□□□ -0.44
PCAT29-201ENST00000558411 MEI1Q5TIA1 1274 aa12.33□□□□□ -0.44
PCAT29-201ENST00000558411 CCDC84Q86UT8 332 aaPredicted RBP12.33□□□□□ -0.44
PCAT29-201ENST00000558411 CMTR1Q8N1G2 835 aaKnown RBP12.33□□□□□ -0.44
PCAT29-201ENST00000558411 TEX9Q8N6V9 391 aa12.33□□□□□ -0.44
PCAT29-201ENST00000558411 ITFG2Q969R8 447 aa12.33□□□□□ -0.44
PCAT29-201ENST00000558411 TLCD1Q96CP7 247 aa12.33□□□□□ -0.44
PCAT29-201ENST00000558411 ZNF317Q96PQ6 595 aaPredicted RBP12.33□□□□□ -0.44
PCAT29-201ENST00000558411 EPB41L4AQ9HCS5 686 aaPredicted RBP12.33□□□□□ -0.44
PCAT29-201ENST00000558411 INCENPQ9NQS7 918 aa12.33□□□□□ -0.44
PCAT29-201ENST00000558411 DISC1Q9NRI5 854 aa12.33□□□□□ -0.44
PCAT29-201ENST00000558411 NOVA2Q9UNW9 492 aaKnown RBP12.33□□□□□ -0.44
PCAT29-201ENST00000558411 SIK3Q9Y2K2 1263 aa12.33□□□□□ -0.44
PCAT29-201ENST00000558411 GLI3P10071 1580 aa12.33□□□□□ -0.44
PCAT29-201ENST00000558411 CLTAP09496 248 aa12.32□□□□□ -0.44
PCAT29-201ENST00000558411 FUT2Q10981 343 aa12.32□□□□□ -0.44
PCAT29-201ENST00000558411 PDCD2Q16342 344 aaPredicted RBP12.32□□□□□ -0.44
PCAT29-201ENST00000558411 COBLL1Q53SF7 1204 aa12.32□□□□□ -0.44
PCAT29-201ENST00000558411 PARD3BQ8TEW8 1205 aa12.32□□□□□ -0.44
PCAT29-201ENST00000558411 AGAP11Q8TF27 550 aa12.32□□□□□ -0.44
PCAT29-201ENST00000558411 NUP133Q8WUM0 1156 aa12.32□□□□□ -0.44
PCAT29-201ENST00000558411 RNF41Q9H4P4 317 aaPredicted RBP12.32□□□□□ -0.44
PCAT29-201ENST00000558411 MAGEF1Q9HAY2 307 aa12.32□□□□□ -0.44
PCAT29-201ENST00000558411 PIH1D3Q9NQM4 214 aaKnown RBP12.32□□□□□ -0.44
PCAT29-201ENST00000558411 PCDHGC5Q9Y5F6 944 aa12.32□□□□□ -0.44
PCAT29-201ENST00000558411 TACC3Q9Y6A5 838 aa12.32□□□□□ -0.44
PCAT29-201ENST00000558411 AFF2P51816 1311 aa12.32□□□□□ -0.44
PCAT29-201ENST00000558411 MYH7BA7E2Y1 1941 aa12.32□□□□□ -0.44
PCAT29-201ENST00000558411 PEX19P40855 299 aa12.32□□□□□ -0.44
PCAT29-201ENST00000558411 MAGOHP61326 146 aaKnown RBP12.32□□□□□ -0.44
PCAT29-201ENST00000558411 RASSF7Q02833 373 aa12.32□□□□□ -0.44
PCAT29-201ENST00000558411 NAB2Q15742 525 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms