RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 ANKRD1Q15327 319 aa9.76□□□□□ -0.85
TPM1-213ENST00000558400 FSCN1Q16658 493 aaKnown RBP9.76□□□□□ -0.85
TPM1-213ENST00000558400 MCTP2Q6DN12 878 aa9.76□□□□□ -0.85
TPM1-213ENST00000558400 CPLX2Q6PUV4 134 aaKnown RBP9.76□□□□□ -0.85
TPM1-213ENST00000558400 TLK2Q86UE8 772 aa9.76□□□□□ -0.85
TPM1-213ENST00000558400 FCHSD1Q86WN1 690 aa9.76□□□□□ -0.85
TPM1-213ENST00000558400 CMTR1Q8N1G2 835 aaKnown RBP9.76□□□□□ -0.85
TPM1-213ENST00000558400 CCDC12Q8WUD4 166 aaPredicted RBP9.76□□□□□ -0.85
TPM1-213ENST00000558400 TOX2Q96NM4 488 aa9.76□□□□□ -0.85
TPM1-213ENST00000558400 PDCD2LQ9BRP1 358 aa9.76□□□□□ -0.85
TPM1-213ENST00000558400 STARD7Q9NQZ5 370 aa9.76□□□□□ -0.85
TPM1-213ENST00000558400 FAM217BQ9NTX9 383 aaPredicted RBP9.76□□□□□ -0.85
TPM1-213ENST00000558400 PDRG1Q9NUG6 133 aa9.76□□□□□ -0.85
TPM1-213ENST00000558400 COL20A1Q9P218 1284 aa9.76□□□□□ -0.85
TPM1-213ENST00000558400 VCANP13611 3396 aa9.76□□□□□ -0.85
TPM1-213ENST00000558400 PLXNA1Q9UIW2 1896 aa9.75□□□□□ -0.85
TPM1-213ENST00000558400 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.75□□□□□ -0.85
TPM1-213ENST00000558400 A0A1W2PQ45 241 aaPredicted RBP9.75□□□□□ -0.85
TPM1-213ENST00000558400 A0A1W2PQY0 241 aa9.75□□□□□ -0.85
TPM1-213ENST00000558400 DCDC2CA8MYV0 355 aa9.75□□□□□ -0.85
TPM1-213ENST00000558400 PRPF3O43395 683 aaKnown RBP9.75□□□□□ -0.85
TPM1-213ENST00000558400 FOSP01100 380 aaPredicted RBP9.75□□□□□ -0.85
TPM1-213ENST00000558400 ASGR1P07306 291 aa9.75□□□□□ -0.85
TPM1-213ENST00000558400 MYCLP12524 364 aaPredicted RBP9.75□□□□□ -0.85
TPM1-213ENST00000558400 EIF2AK2P19525 551 aaKnown RBP9.75□□□□□ -0.85
TPM1-213ENST00000558400 PDIA3P30101 505 aaKnown RBP9.75□□□□□ -0.85
TPM1-213ENST00000558400 CDC27P30260 824 aa9.75□□□□□ -0.85
TPM1-213ENST00000558400 ATN1P54259 1190 aaPredicted RBP9.75□□□□□ -0.85
TPM1-213ENST00000558400 RTP1P59025 263 aa9.75□□□□□ -0.85
TPM1-213ENST00000558400 FUT2Q10981 343 aa9.75□□□□□ -0.85
TPM1-213ENST00000558400 SNX17Q15036 470 aa9.75□□□□□ -0.85
TPM1-213ENST00000558400 PGM5Q15124 567 aa9.75□□□□□ -0.85
TPM1-213ENST00000558400 LRRC26Q2I0M4 334 aa9.75□□□□□ -0.85
TPM1-213ENST00000558400 PPP1R18Q6NYC8 613 aa9.75□□□□□ -0.85
TPM1-213ENST00000558400 CCDC62Q6P9F0 684 aa9.75□□□□□ -0.85
TPM1-213ENST00000558400 SEPT14Q6ZU15 432 aa9.75□□□□□ -0.85
TPM1-213ENST00000558400 HEATR3Q7Z4Q2 680 aa9.75□□□□□ -0.85
TPM1-213ENST00000558400 RAB11FIP4Q86YS3 637 aa9.75□□□□□ -0.85
TPM1-213ENST00000558400 C7orf61Q8IZ16 206 aa9.75□□□□□ -0.85
TPM1-213ENST00000558400 IL27Q8NEV9 243 aa9.75□□□□□ -0.85
TPM1-213ENST00000558400 FERMT2Q96AC1 680 aa9.75□□□□□ -0.85
TPM1-213ENST00000558400 IL17RAQ96F46 866 aa9.75□□□□□ -0.85
TPM1-213ENST00000558400 EHMT1Q9H9B1 1298 aa9.75□□□□□ -0.85
TPM1-213ENST00000558400 POLR3EQ9NVU0 708 aa9.75□□□□□ -0.85
TPM1-213ENST00000558400 MROH7Q68CQ1 1323 aa9.75□□□□□ -0.85
TPM1-213ENST00000558400 BAZ2BQ9UIF8 2168 aaKnown RBP9.74□□□□□ -0.85
TPM1-213ENST00000558400 A0A0U1RQG5 324 aaPredicted RBP9.74□□□□□ -0.85
TPM1-213ENST00000558400 A6NJR5 290 aa9.74□□□□□ -0.85
TPM1-213ENST00000558400 SPDYE3A6NKU9 549 aa9.74□□□□□ -0.85
TPM1-213ENST00000558400 MEIS2O14770 477 aa9.74□□□□□ -0.85
TPM1-213ENST00000558400 CPLX1O14810 134 aa9.74□□□□□ -0.85
TPM1-213ENST00000558400 MAFGO15525 162 aa9.74□□□□□ -0.85
TPM1-213ENST00000558400 ADCY6O43306 1168 aa9.74□□□□□ -0.85
TPM1-213ENST00000558400 GH1P01241 217 aa9.74□□□□□ -0.85
TPM1-213ENST00000558400 IFNAR1P17181 557 aa9.74□□□□□ -0.85
TPM1-213ENST00000558400 BMP8BP34820 402 aa9.74□□□□□ -0.85
TPM1-213ENST00000558400 LAMC2Q13753 1193 aa9.74□□□□□ -0.85
TPM1-213ENST00000558400 LRIT3Q3SXY7 679 aa9.74□□□□□ -0.85
TPM1-213ENST00000558400 GNPTABQ3T906 1256 aa9.74□□□□□ -0.85
TPM1-213ENST00000558400 USP17L6PQ6QN14 398 aa9.74□□□□□ -0.85
TPM1-213ENST00000558400 ANKRD33Q7Z3H0 272 aa9.74□□□□□ -0.85
TPM1-213ENST00000558400 TRIM22Q8IYM9 498 aa9.74□□□□□ -0.85
TPM1-213ENST00000558400 OR6J1Q8NGC5 347 aa9.74□□□□□ -0.85
TPM1-213ENST00000558400 LENG1Q96BZ8 264 aaPredicted RBP9.74□□□□□ -0.85
TPM1-213ENST00000558400 GDF15Q99988 308 aa9.74□□□□□ -0.85
TPM1-213ENST00000558400 RNF26Q9BY78 433 aaPredicted RBP9.74□□□□□ -0.85
TPM1-213ENST00000558400 UPF3BQ9BZI7 483 aaKnown RBP9.74□□□□□ -0.85
TPM1-213ENST00000558400 RIC8AQ9NPQ8 531 aa9.74□□□□□ -0.85
TPM1-213ENST00000558400 BARHL2Q9NY43 387 aa9.74□□□□□ -0.85
TPM1-213ENST00000558400 DDX41Q9UJV9 622 aaKnown RBP9.74□□□□□ -0.85
TPM1-213ENST00000558400 ATP11BQ9Y2G3 1177 aa9.74□□□□□ -0.85
TPM1-213ENST00000558400 MRVI1Q9Y6F6 885 aa9.74□□□□□ -0.85
TPM1-213ENST00000558400 TTC28Q96AY4 2481 aa9.74□□□□□ -0.85
TPM1-213ENST00000558400 hCG_1642624A0A1W2PR95 340 aa9.73□□□□□ -0.85
TPM1-213ENST00000558400 SMCO2A6NFE2 343 aa9.73□□□□□ -0.85
TPM1-213ENST00000558400 ARVCFO00192 962 aa9.73□□□□□ -0.85
TPM1-213ENST00000558400 CTAGE5O15320 804 aa9.73□□□□□ -0.85
TPM1-213ENST00000558400 PPFIA4O75335 1185 aa9.73□□□□□ -0.85
TPM1-213ENST00000558400 SCG2P13521 617 aa9.73□□□□□ -0.85
TPM1-213ENST00000558400 CD44P16070 742 aaKnown RBP9.73□□□□□ -0.85
TPM1-213ENST00000558400 GNA11P29992 359 aa9.73□□□□□ -0.85
TPM1-213ENST00000558400 CDK7P50613 346 aa9.73□□□□□ -0.85
TPM1-213ENST00000558400 NAPAP54920 295 aa9.73□□□□□ -0.85
TPM1-213ENST00000558400 BEX3Q00994 111 aa9.73□□□□□ -0.85
TPM1-213ENST00000558400 TLE2Q04725 743 aa9.73□□□□□ -0.85
TPM1-213ENST00000558400 SSRP1Q08945 709 aaKnown RBP9.73□□□□□ -0.85
TPM1-213ENST00000558400 TOB2Q14106 344 aaPredicted RBP9.73□□□□□ -0.85
TPM1-213ENST00000558400 PFKFB3Q16875 520 aaPredicted RBP9.73□□□□□ -0.85
TPM1-213ENST00000558400 PCNX4Q63HM2 1172 aa9.73□□□□□ -0.85
TPM1-213ENST00000558400 NLRX1Q86UT6 975 aa9.73□□□□□ -0.85
TPM1-213ENST00000558400 FAM177A1Q8N128 213 aaPredicted RBP9.73□□□□□ -0.85
TPM1-213ENST00000558400 GIMAP8Q8ND71 665 aaPredicted RBP9.73□□□□□ -0.85
TPM1-213ENST00000558400 EMID1Q96A84 441 aaPredicted RBP9.73□□□□□ -0.85
TPM1-213ENST00000558400 CDHR1Q96JP9 859 aa9.73□□□□□ -0.85
TPM1-213ENST00000558400 LBHD1Q9BQE6 289 aaPredicted RBP9.73□□□□□ -0.85
TPM1-213ENST00000558400 C6orf50Q9HD87 102 aa9.73□□□□□ -0.85
TPM1-213ENST00000558400 DDX49Q9Y6V7 483 aaKnown RBP9.73□□□□□ -0.85
TPM1-213ENST00000558400 CNTNAP5Q8WYK1 1306 aa9.73□□□□□ -0.85
TPM1-213ENST00000558400 NID2Q14112 1375 aa9.73□□□□□ -0.85
TPM1-213ENST00000558400 ESYT2A0FGR8 921 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms