RNA–Protein interactions for RNA: ENST00000558223.5

MARK3-212, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 908 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-212ENST00000558223 CENPCQ03188 943 aa8.26□□□□□ -1.09
MARK3-212ENST00000558223 TRIP4Q15650 581 aaPredicted RBP8.26□□□□□ -1.09
MARK3-212ENST00000558223 PPP1R26Q5T8A7 1209 aaPredicted RBP8.26□□□□□ -1.09
MARK3-212ENST00000558223 TTBK2Q6IQ55 1244 aa8.26□□□□□ -1.09
MARK3-212ENST00000558223 PCGF5Q86SE9 256 aa8.26□□□□□ -1.09
MARK3-212ENST00000558223 FAM178BQ8IXR5 827 aa8.26□□□□□ -1.09
MARK3-212ENST00000558223 IFNL3Q8IZI9 196 aa8.26□□□□□ -1.09
MARK3-212ENST00000558223 MARCH10Q8NA82 808 aaPredicted RBP8.26□□□□□ -1.09
MARK3-212ENST00000558223 BRF1Q92994 677 aa8.26□□□□□ -1.09
MARK3-212ENST00000558223 OSBP2Q969R2 916 aa8.26□□□□□ -1.09
MARK3-212ENST00000558223 CDK15Q96Q40 435 aa8.26□□□□□ -1.09
MARK3-212ENST00000558223 LRRC3Q9BY71 257 aa8.26□□□□□ -1.09
MARK3-212ENST00000558223 KRT23Q9C075 422 aa8.26□□□□□ -1.09
MARK3-212ENST00000558223 RNF41Q9H4P4 317 aaPredicted RBP8.26□□□□□ -1.09
MARK3-212ENST00000558223 PPCSQ9HAB8 311 aa8.26□□□□□ -1.09
MARK3-212ENST00000558223 ZFYVE1Q9HBF4 777 aa8.26□□□□□ -1.09
MARK3-212ENST00000558223 CASS4Q9NQ75 786 aa8.26□□□□□ -1.09
MARK3-212ENST00000558223 NIP7Q9Y221 180 aaKnown RBP eCLIP8.26□□□□□ -1.09
MARK3-212ENST00000558223 RTCBQ9Y3I0 505 aaKnown RBP8.26□□□□□ -1.09
MARK3-212ENST00000558223 ZNF831Q5JPB2 1677 aa8.26□□□□□ -1.09
MARK3-212ENST00000558223 COL16A1Q07092 1604 aaPredicted RBP8.25□□□□□ -1.09
MARK3-212ENST00000558223 A0A1W2PP55 124 aa8.25□□□□□ -1.09
MARK3-212ENST00000558223 GPAA1O43292 621 aa8.25□□□□□ -1.09
MARK3-212ENST00000558223 LARGE1O95461 756 aa8.25□□□□□ -1.09
MARK3-212ENST00000558223 CELA3AP09093 270 aa8.25□□□□□ -1.09
MARK3-212ENST00000558223 CCDC192P0DO97 292 aa8.25□□□□□ -1.09
MARK3-212ENST00000558223 CPA1P15085 419 aa8.25□□□□□ -1.09
MARK3-212ENST00000558223 TFE3P19532 575 aaPredicted RBP8.25□□□□□ -1.09
MARK3-212ENST00000558223 CES1P23141 567 aa8.25□□□□□ -1.09
MARK3-212ENST00000558223 TXLNAP40222 546 aa8.25□□□□□ -1.09
MARK3-212ENST00000558223 PIN1Q13526 163 aaPredicted RBP8.25□□□□□ -1.09
MARK3-212ENST00000558223 SART3Q15020 963 aaKnown RBP8.25□□□□□ -1.09
MARK3-212ENST00000558223 LONRF2Q1L5Z9 754 aa8.25□□□□□ -1.09
MARK3-212ENST00000558223 GFOD2Q3B7J2 385 aa8.25□□□□□ -1.09
MARK3-212ENST00000558223 GRAMD1BQ3KR37 738 aa8.25□□□□□ -1.09
MARK3-212ENST00000558223 CAVIN4Q5BKX8 364 aa8.25□□□□□ -1.09
MARK3-212ENST00000558223 ZC3H12BQ5HYM0 836 aaKnown RBP8.25□□□□□ -1.09
MARK3-212ENST00000558223 SLC9C2Q5TAH2 1124 aa8.25□□□□□ -1.09
MARK3-212ENST00000558223 SUSD4Q5VX71 490 aa8.25□□□□□ -1.09
MARK3-212ENST00000558223 IER5Q5VY09 327 aa8.25□□□□□ -1.09
MARK3-212ENST00000558223 C6orf15Q6UXA7 325 aaPredicted RBP8.25□□□□□ -1.09
MARK3-212ENST00000558223 SYNE3Q6ZMZ3 975 aa8.25□□□□□ -1.09
MARK3-212ENST00000558223 AGMOQ6ZNB7 445 aa8.25□□□□□ -1.09
MARK3-212ENST00000558223 GK5Q6ZS86 529 aa8.25□□□□□ -1.09
MARK3-212ENST00000558223 PASD1Q8IV76 773 aa8.25□□□□□ -1.09
MARK3-212ENST00000558223 ANKRD18AQ8IVF6 992 aa8.25□□□□□ -1.09
MARK3-212ENST00000558223 CCDC116Q8IYX3 515 aa8.25□□□□□ -1.09
MARK3-212ENST00000558223 ZNF295-AS1Q8N0V1 137 aa8.25□□□□□ -1.09
MARK3-212ENST00000558223 AFAP1L2Q8N4X5 818 aa8.25□□□□□ -1.09
MARK3-212ENST00000558223 NECAB1Q8N987 351 aa8.25□□□□□ -1.09
MARK3-212ENST00000558223 SPATA5Q8NB90 893 aa8.25□□□□□ -1.09
MARK3-212ENST00000558223 FBXO27Q8NI29 283 aa8.25□□□□□ -1.09
MARK3-212ENST00000558223 WASF1Q92558 559 aa8.25□□□□□ -1.09
MARK3-212ENST00000558223 AIDAQ96BJ3 306 aa8.25□□□□□ -1.09
MARK3-212ENST00000558223 KLF16Q9BXK1 252 aaPredicted RBP8.25□□□□□ -1.09
MARK3-212ENST00000558223 ANKRD2Q9GZV1 360 aa8.25□□□□□ -1.09
MARK3-212ENST00000558223 JADE2Q9NQC1 790 aa8.25□□□□□ -1.09
MARK3-212ENST00000558223 MAP3K20Q9NYL2 800 aaKnown RBP8.25□□□□□ -1.09
MARK3-212ENST00000558223 CCDC39Q9UFE4 941 aa8.25□□□□□ -1.09
MARK3-212ENST00000558223 HRH3Q9Y5N1 445 aa8.25□□□□□ -1.09
MARK3-212ENST00000558223 PDS5AQ29RF7 1337 aaKnown RBP8.25□□□□□ -1.09
MARK3-212ENST00000558223 PNPLA7Q6ZV29 1317 aa8.25□□□□□ -1.09
MARK3-212ENST00000558223 ITGB4P16144 1822 aa8.24□□□□□ -1.09
MARK3-212ENST00000558223 RIC1Q4ADV7 1423 aa8.24□□□□□ -1.09
MARK3-212ENST00000558223 CCDC196A0A1B0GTZ2 297 aa8.24□□□□□ -1.09
MARK3-212ENST00000558223 TMEM238LA0A1B0GVL6 79 aa8.24□□□□□ -1.09
MARK3-212ENST00000558223 SYCE3A1L190 88 aa8.24□□□□□ -1.09
MARK3-212ENST00000558223 B2RBV5 119 aa8.24□□□□□ -1.09
MARK3-212ENST00000558223 CPLX1O14810 134 aa8.24□□□□□ -1.09
MARK3-212ENST00000558223 TBX3O15119 743 aa8.24□□□□□ -1.09
MARK3-212ENST00000558223 FIBPO43427 364 aa8.24□□□□□ -1.09
MARK3-212ENST00000558223 RPS6KA4O75676 772 aa8.24□□□□□ -1.09
MARK3-212ENST00000558223 NTSR2O95665 410 aa8.24□□□□□ -1.09
MARK3-212ENST00000558223 TIMP2P16035 220 aa8.24□□□□□ -1.09
MARK3-212ENST00000558223 PDIA3P30101 505 aaKnown RBP8.24□□□□□ -1.09
MARK3-212ENST00000558223 ADORA1P30542 326 aa8.24□□□□□ -1.09
MARK3-212ENST00000558223 MAN1A1P33908 653 aa8.24□□□□□ -1.09
MARK3-212ENST00000558223 LIFRP42702 1097 aa8.24□□□□□ -1.09
MARK3-212ENST00000558223 MCAMP43121 646 aa8.24□□□□□ -1.09
MARK3-212ENST00000558223 ITKQ08881 620 aa8.24□□□□□ -1.09
MARK3-212ENST00000558223 CCDC129Q6ZRS4 1044 aa8.24□□□□□ -1.09
MARK3-212ENST00000558223 EEPD1Q7L9B9 569 aa8.24□□□□□ -1.09
MARK3-212ENST00000558223 BRAPQ7Z569 592 aa8.24□□□□□ -1.09
MARK3-212ENST00000558223 LSRQ86X29 649 aaPredicted RBP8.24□□□□□ -1.09
MARK3-212ENST00000558223 TRIM42Q8IWZ5 723 aa8.24□□□□□ -1.09
MARK3-212ENST00000558223 TCEAL8Q8IYN2 117 aa8.24□□□□□ -1.09
MARK3-212ENST00000558223 NSUN7Q8NE18 718 aaKnown RBP8.24□□□□□ -1.09
MARK3-212ENST00000558223 E2F7Q96AV8 911 aa8.24□□□□□ -1.09
MARK3-212ENST00000558223 MTMR8Q96EF0 704 aa8.24□□□□□ -1.09
MARK3-212ENST00000558223 PDLIM2Q96JY6 352 aa8.24□□□□□ -1.09
MARK3-212ENST00000558223 SUSD3Q96L08 255 aa8.24□□□□□ -1.09
MARK3-212ENST00000558223 SEC62Q99442 399 aaKnown RBP8.24□□□□□ -1.09
MARK3-212ENST00000558223 SPATA9Q9BWV2 254 aa8.24□□□□□ -1.09
MARK3-212ENST00000558223 CDH19Q9H159 772 aa8.24□□□□□ -1.09
MARK3-212ENST00000558223 ABI2Q9NYB9 513 aaPredicted RBP8.24□□□□□ -1.09
MARK3-212ENST00000558223 ZNRF3Q9ULT6 936 aa8.24□□□□□ -1.09
MARK3-212ENST00000558223 CNPY2Q9Y2B0 182 aa8.24□□□□□ -1.09
MARK3-212ENST00000558223 KCNMB2Q9Y691 235 aa8.24□□□□□ -1.09
MARK3-212ENST00000558223 UBN2Q6ZU65 1347 aa8.24□□□□□ -1.09
MARK3-212ENST00000558223 PHLPP1O60346 1717 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms